iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087049

Ensembl Protein ID

ENSORLP00000005657.1

UniProt Accession

H2LI37; H2LI37_ORYLA

Genbank Protein ID

ENSORLP00000005657

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04006896

Gene Name

tdrd3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000004502.1	ENSORLT00000005658.1	ENSORLP00000005657.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	4.10e-13	49.3	291	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           de +l+ l+eMGFdre+a+qaL+++nnn+e+A++ Ll+g
   Q: 291  DERALRDLMEMGFDREAARQALLDNNNNVEVALNSLLTG 329
           7899*********************************97 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSDLVDSLIK EGWYLTDEGI EELKGSAEKL THSDIIHVAL DTDLRPIGSK ILPSDINSGK 60
TEKLEGPCVL QVQKVRNISA PKDNEESQGA PRMLRLQMTD GHTTCVGLEF KHLSKISLNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTCGGAC ATGTTTACGG TTTAAGCTTT GTTTTGGAGC CATTATGCAT TACAGTATTA 60
GATAGCTGTA GAGGTTGCAC ACTTACAATT TATTGTTGTA GTTAGTTTAA CGCCAGTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003892--CUE
IPR033472--DUF1767
IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS51140--CUE
PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0006397--P:mRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	32.19	3.00e-16	79.30
IUUC-Aml-001751	Ailuropoda melanoleuca	47.99	7.00e-167	580.00
IUUC-Atr-002788	Amborella trichopoda	31.63	4.00e-23	102.00
IUUC-Apl-004055	Anas platyrhynchos	45.99	5.00e-143	501.00
IUUC-Aca-004367	Anolis carolinensis	57.66	2.00e-135	476.00
IUUC-Aly-006072	Arabidopsis lyrata	31.28	7.00e-22	98.20
IUUC-Ath-007491	Arabidopsis thaliana	30.26	5.00e-22	98.60
IUUC-Ame-011439	Astyanax mexicanus	57.95	0.00e+00	700.00
IUUC-Bta-012894	Bos taurus	47.07	4.00e-159	555.00
IUUC-Bdi-014462	Brachypodium distachyon	31.36	8.00e-22	97.80
IUUC-Bol-015343	Brassica oleracea	36.18	3.00e-21	96.30
IUUC-Bra-016787	Brassica rapa	36.24	4.00e-21	95.10
IUUC-Cel-018154	Caenorhabditis elegans	34.03	8.00e-30	125.00
IUUC-Cja-019364	Callithrix jacchus	46.15	1.00e-132	466.00
IUUC-Cfa-021166	Canis familiaris	47.41	9.00e-163	566.00
IUUC-Cpo-021678	Cavia porcellus	38.67	4.00e-98	352.00
IUUC-Csa-023299	Chlorocebus sabaeus	48.92	2.00e-176	612.00
IUUC-Cho-024694	Choloepus hoffmanni	59.54	3.00e-82	299.00
IUUC-Cin-025191	Ciona intestinalis	42.86	4.00e-44	170.00
IUUC-Csv-026348	Ciona savignyi	43.75	4.00e-11	59.30
IUUC-Dre-028715	Danio rerio	56.35	0.00e+00	696.00
IUUC-Dno-030091	Dasypus novemcinctus	46.90	1.00e-169	589.00
IUUC-Dor-030807	Dipodomys ordii	39.92	2.00e-101	363.00
IUUC-Dme-031770	Drosophila melanogaster	31.78	1.00e-40	161.00
IUUC-Ete-032507	Echinops telfairi	32.74	7.00e-32	132.00
IUUC-Eca-033406	Equus caballus	44.78	1.00e-107	383.00
IUUC-Eeu-034600	Erinaceus europaeus	39.36	4.00e-67	249.00
IUUC-Fca-035916	Felis catus	47.75	1.00e-164	573.00
IUUC-Fal-036658	Ficedula albicollis	47.24	2.00e-166	578.00
IUUC-Gmo-038974	Gadus morhua	61.22	5.00e-128	451.00
IUUC-Gga-040195	Gallus gallus	47.32	6.00e-178	617.00
IUUC-Gac-042537	Gasterosteus aculeatus	69.65	0.00e+00	962.00
IUUC-Gma-044234	Glycine max	34.17	7.00e-24	104.00
IUUC-Ggo-044715	Gorilla gorilla	46.91	3.00e-139	488.00
IUUC-Hsa-045814	Homo sapiens	49.05	2.00e-176	612.00
IUUC-Hvu-047365	Hordeum vulgare	32.82	4.00e-17	82.40
IUUC-Itr-047866	Ictidomys tridecemlineatus	49.29	4.00e-174	604.00
IUUC-Lch-050393	Latimeria chalumnae	48.47	9.00e-179	620.00
IUUC-Lpe-050691	Leersia perrieri	32.49	3.00e-21	95.90
IUUC-Loc-052859	Lepisosteus oculatus	52.67	0.00e+00	674.00
IUUC-Laf-053953	Loxodonta africana	40.41	1.00e-67	250.00
IUUC-Mcc-055846	Macaca mulatta	48.60	2.00e-173	602.00
IUUC-Meu-056790	Macropus eugenii	55.86	3.00e-66	246.00
IUUC-Mtr-058749	Medicago truncatula	34.52	1.00e-20	94.40
IUUC-Mla-058959	Melampsora laricipopulina	38.24	5.00e-06	45.10
IUUC-Mga-059656	Meleagris gallopavo	47.92	2.00e-163	568.00
IUUC-Mmr-061089	Microcebus murinus	47.61	1.00e-154	540.00
IUUC-Mdo-063043	Monodelphis domestica	50.70	1.00e-90	327.00
IUUC-Mmu-063654	Mus musculus	47.55	3.00e-159	555.00
IUUC-Mac-064947	Musa acuminata	34.74	5.00e-19	88.60
IUUC-Mpu-066115	Mustela putorius furo	44.98	1.00e-111	397.00
IUUC-Mlu-066974	Myotis lucifugus	43.92	9.00e-136	477.00
IUUC-Nle-069184	Nomascus leucogenys	48.69	4.00e-177	614.00
IUUC-Opr-070770	Ochotona princeps	41.73	3.00e-112	399.00
IUUC-Ont-072040	Oreochromis niloticus	73.85	0.00e+00	1043.00
IUUC-Oan-073448	Ornithorhynchus anatinus	47.72	2.00e-32	132.00
IUUC-Ocu-074405	Oryctolagus cuniculus	48.98	1.00e-173	603.00
IUUC-Oba-075977	Oryza barthii	32.47	4.00e-16	78.60
IUUC-Obr-076298	Oryza brachyantha	30.77	8.00e-20	91.30
IUUC-Ogl-077706	Oryza glaberrima	32.47	1.00e-16	80.50
IUUC-Ogu-078381	Oryza glumaepatula	31.96	2.00e-16	80.10
IUUC-Oin-080150	Oryza indica	31.96	2.00e-16	79.70
IUUC-Ome-081153	Oryza meridionalis	32.31	3.00e-15	76.30
IUUC-Oni-083115	Oryza nivara	31.96	1.00e-15	77.00
IUUC-Opu-083860	Oryza punctata	31.09	3.00e-20	92.80
IUUC-Oru-084859	Oryza rufipogon	32.47	1.00e-16	80.90
IUUC-Osa-085567	Oryza sativa	32.99	2.00e-15	76.60
IUUC-Oga-088455	Otolemur garnettii	49.31	3.00e-175	608.00
IUUC-Oar-090096	Ovis aries	49.36	3.00e-170	592.00
IUUC-Ptr-090974	Pan troglodytes	47.18	7.00e-139	487.00
IUUC-Pan-092657	Papio anubis	48.73	1.00e-174	606.00
IUUC-Psi-093113	Pelodiscus sinensis	45.24	6.00e-139	487.00
IUUC-Pma-094508	Petromyzon marinus	47.22	3.00e-04	40.40
IUUC-Ppa-095466	Physcomitrella patens	38.78	1.00e-23	104.00
IUUC-Pfo-096631	Poecilia formosa	73.86	0.00e+00	1061.00
IUUC-Pab-098070	Pongo abelii	48.38	2.00e-175	608.00
IUUC-Pop-099235	Populus trichocarpa	33.50	1.00e-20	94.40
IUUC-Pca-101032	Procavia capensis	63.14	9.00e-79	287.00
IUUC-Ppe-101793	Prunus persica	30.96	9.00e-22	97.80
IUUC-Pva-102290	Pteropus vampyrus	45.90	7.00e-132	464.00
IUUC-Rno-105080	Rattus norvegicus	44.52	4.00e-122	431.00
IUUC-Sha-107598	Sarcophilus harrisii	44.70	6.00e-146	511.00
IUUC-Sit-110735	Setaria italica	32.99	1.00e-21	97.40
IUUC-Sly-111126	Solanum lycopersicum	37.75	3.00e-19	89.00
IUUC-Stu-112780	Solanum tuberosum	34.74	2.00e-23	103.00
IUUC-Sar-113418	Sorex araneus	44.91	3.00e-123	435.00
IUUC-Sbi-113925	Sorghum bicolor	32.47	9.00e-22	97.80
IUUC-Sre-114917	Sporisorium reilianum	34.69	5.00e-06	45.40
IUUC-Ssc-115712	Sus scrofa	48.99	1.00e-172	600.00
IUUC-Tgu-117148	Taeniopygia guttata	48.14	9.00e-176	610.00
IUUC-Tru-117831	Takifugu rubripes	68.09	0.00e+00	924.00
IUUC-Tsy-118917	Tarsius syrichta	43.77	7.00e-118	417.00
IUUC-Tni-120783	Tetraodon nigroviridis	65.81	0.00e+00	882.00
IUUC-Tca-121430	Theobroma cacao	35.56	3.00e-06	46.20
IUUC-Tae-123752	Triticum aestivum	32.19	1.00e-16	80.50
IUUC-Tur-126238	Triticum urartu	31.96	1.00e-15	77.40
IUUC-Tbe-127989	Tupaia belangeri	46.15	7.00e-04	40.00
IUUC-Ttr-128615	Tursiops truncatus	41.29	4.00e-105	375.00
IUUC-Vpa-130531	Vicugna pacos	47.35	2.00e-134	473.00
IUUC-Vvi-131607	Vitis vinifera	32.31	3.00e-16	79.30
IUUC-Xtr-132787	Xenopus tropicalis	46.55	3.00e-151	528.00
IUUC-Xma-133815	Xiphophorus maculatus	71.50	0.00e+00	968.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence