iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d013092	Zm00001d013092_T003	Zm00001d013092_T003
Zm00001d013092	Zm00001d013092_T002	Zm00001d013092_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.90e-48	164.4	73	165

Active Site

Position(s)	Description	Evidence
110	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 45   gvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspalsvesvllsiqsllaepnpesplneeaaellkknreeyk 134
           g+Fkl+++f+edYP kPP+v+f++++fhPn+y++G++Cl+il+  ++Wsp ++v+ +l+siqsll++pnp+sp+n+eaa+++++n++ey+
   Q: 73   GTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYN 160
           89****************************************9..********************************************* PP
   S: 135  kkvre 139
           +kvre
   Q: 161  RKVRE 165
           **985 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSTPARKRLM RDFKRLQQDP PAGISGAPHD NNIMLWNAVI FGPDDTPWDG EQTVCFLILT 60
VSLLTYVKFT LVGTFKLTLQ FTEDYPNKPP TVRFVSRMFH PNIYADGSIC LDILQNQWSP 120

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Nucleotide Sequence
(Fasta)

ATCAGACTCA GGAGGCGACG CGCGCTTGGA GGTAACGCGA TCACGGCCGC TCGGGTGAAG 60
GCCTGAAGGG GGCACGTCAC GTCACGCCGC TCGCGCCGCG TCGTTTTCGC ACCCGGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004063	Anas platyrhynchos	64.33	1.00e-60	224.00
IUUC-Rno-105577	Rattus norvegicus	69.94	2.00e-69	254.00
IUUC-Tgu-116604	Taeniopygia guttata	69.77	1.00e-69	254.00
IUUC-Tru-117924	Takifugu rubripes	67.84	4.00e-64	236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence