iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006453

UUCD1 version

UUC-ArL-01269

Ensembl Protein ID

fgenesh1_pm.C_scaffold_3000987

UniProt Accession

D7LAT1; D7LAT1_ARALL

Genbank Protein ID

EFH61131.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348715

Gene Name

UBP13; ARALYDRAFT_317971

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_3000987	fgenesh1_pm.C_scaffold_3000987	fgenesh1_pm.C_scaffold_3000987

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.80e-71	240.7	198	521
ULD/UDP/UBQ/UBQ_Other	1.30e-06	28.9	591	640

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkk 79
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ ++++ p++++  +lq+lf +l ++++++v+++el+k++++
   Q: 198  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDAPTASIPLALQSLFYKL-QYNDTSVATKELTKSFGW 270
           6******************************.....555555789***************.88999************8 PP
   S: 80   eaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikcle 158
               +++++q+D+qE+ ++l ++le+++                          k +  + +i++lF+g+  + i c +
   Q: 271  DT--YDSFMQHDVQELNRVLCEKLEDKM--------------------------KGTVVEGTIQKLFEGHHMNYIECIN 321
           77..67**********************..........................7899********************* PP
   S: 159  cdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRf 237
            d +s+r+e+f+dl+l+v+g +     ++  +++++++ e+leg+nky+ e   ++q+a+k + +  +P+vL l+LkRf
   Q: 322  VDYKSTRKESFYDLQLDVKGCK-----DVYASFDKYVEVERLEGDNKYHAEGH-DLQDAKKGVLFIDFPPVLQLQLKRF 394
           **********************.....9*********************9996.59*********************** PP
   S: 238  sfseeqksrekinkkvefpleLdls....pfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdD 311
           +++  ++   kin+++efpl+Ldl+    ++++ p+ ++++++ Y L++v+vHsG++++GHY+a+++   +++W++fdD
   Q: 395  EYDFMRDTMVKINDRYEFPLQLDLDrengKYLS-PDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPtLSDQWYKFDD 472
           ************************965545555.5666678**************************945677****** PP
   S: 312  skVtevkeeevleetg.......................staYvlfYkr 337
           ++Vt+ + ++ lee+                        s+aY+l+Y r
   Q: 473  ERVTKEDVKRALEEQYggeeelpqnnpgfnnppfkftkySNAYMLVYIR 521
           *******9999997779******************************87 PP

ULD/UDP/UBQ/UBQ_Other

   S: 10   gs.eltlkvnpsdtVaeLKekiekklgippeqqrLiyk..........GkiLeddk 54
           +  + ++++ ++++++++Ke++ k++g+p++ qr +++          +      +
   Q: 591  HEkVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWakrqnhtyrpN------R 640
           555889999***************************8845553333333......3 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTMMTPPPLD QQEDEEMLVP NPDLVEGPQP MEVAQTEPAA SAVENPPPED PPTLKFTWTI 60
PIFTRLNTRK HYSDVFVVGG YKWRILIFPK GNNVDHLSMY LDVADAANLP YGWSRYSQFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTATGA TGACTCCGCC GCCGCTTGAT GTAATCTCCG ATTAACCTTT TATTGTTAGT 60
TTGTGTCAAT TTGATGTCGT GTTCGTGGGT TTCTACGCGT ATTCGACCTT AACCTGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0005829--C:cytosol
GO:0009506--C:plasmodesma
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_317971

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002408	Ailuropoda melanoleuca	36.91	2.00e-164	573.00
IUUC-Apl-003558	Anas platyrhynchos	37.03	3.00e-169	588.00
IUUC-Aca-004518	Anolis carolinensis	38.45	4.00e-158	551.00
IUUC-Ath-007610	Arabidopsis thaliana	98.48	0.00e+00	2152.00
IUUC-Ago-007849	Ashbya gossypii	32.79	3.00e-141	496.00
IUUC-Acl-008327	Aspergillus clavatus	38.87	0.00e+00	644.00
IUUC-Afl-008491	Aspergillus flavus	38.10	0.00e+00	635.00
IUUC-Afu-008804	Aspergillus fumigatus	38.64	2.00e-174	605.00
IUUC-Ani-009257	Aspergillus nidulans	29.91	2.00e-32	135.00
IUUC-Ang-009776	Aspergillus niger	37.70	3.00e-178	618.00
IUUC-Bgr-012132	Blumeria graminis	34.49	1.00e-160	560.00
IUUC-Bta-013192	Bos taurus	37.10	2.00e-165	575.00
IUUC-Bci-013924	Botrytis cinerea	35.37	1.00e-166	580.00
IUUC-Bol-016286	Brassica oleracea	91.95	0.00e+00	1960.00
IUUC-Bra-016714	Brassica rapa	91.66	0.00e+00	1943.00
IUUC-Cja-019006	Callithrix jacchus	36.88	9.00e-165	573.00
IUUC-Cfa-020361	Canis familiaris	36.91	2.00e-164	572.00
IUUC-Cpo-022320	Cavia porcellus	37.00	2.00e-164	572.00
IUUC-Cin-025689	Ciona intestinalis	35.72	9.00e-155	540.00
IUUC-Csv-025963	Ciona savignyi	34.32	4.00e-150	525.00
IUUC-Cgl-026650	Colletotrichum gloeosporioides	36.53	5.00e-177	614.00
IUUC-Dno-029696	Dasypus novemcinctus	37.00	1.00e-163	570.00
IUUC-Dor-030611	Dipodomys ordii	50.46	3.00e-83	303.00
IUUC-Dme-031583	Drosophila melanogaster	35.04	2.00e-159	556.00
IUUC-Ete-033191	Echinops telfairi	36.39	2.00e-159	556.00
IUUC-Eca-034122	Equus caballus	36.91	2.00e-164	572.00
IUUC-Eeu-035292	Erinaceus europaeus	38.54	2.00e-63	236.00
IUUC-Fca-036377	Felis catus	36.82	3.00e-164	572.00
IUUC-Fal-036964	Ficedula albicollis	37.10	2.00e-170	592.00
IUUC-Fox-037695	Fusarium oxysporum	35.68	3.00e-180	625.00
IUUC-Fso-038084	Fusarium solani	35.17	1.00e-173	603.00
IUUC-Ggr-040029	Gaeumannomyces graminis	35.09	2.00e-170	592.00
IUUC-Gga-040944	Gallus gallus	37.10	1.00e-170	593.00
IUUC-Gac-041740	Gasterosteus aculeatus	36.17	6.00e-168	584.00
IUUC-Ggo-044947	Gorilla gorilla	36.91	1.00e-164	573.00
IUUC-Itr-047904	Ictidomys tridecemlineatus	38.30	3.00e-153	535.00
IUUC-Laf-053566	Loxodonta africana	37.00	1.00e-164	573.00
IUUC-Mcc-055549	Macaca mulatta	36.91	2.00e-164	572.00
IUUC-Meu-056887	Macropus eugenii	29.40	9.00e-67	248.00
IUUC-Mor-057149	Magnaporthe oryzae	35.10	2.00e-168	586.00
IUUC-Mpo-057536	Magnaporthe poae	35.76	1.00e-173	603.00
IUUC-Mga-060148	Meleagris gallopavo	37.10	2.00e-170	592.00
IUUC-Mdo-062079	Monodelphis domestica	37.17	7.00e-149	521.00
IUUC-Mmu-063678	Mus musculus	37.10	9.00e-164	570.00
IUUC-Mpu-066744	Mustela putorius furo	36.91	1.00e-164	573.00
IUUC-Mlu-067949	Myotis lucifugus	36.96	4.00e-163	568.00
IUUC-Ncr-068818	Neurospora crassa	36.81	0.00e+00	632.00
IUUC-Opr-071001	Ochotona princeps	36.88	3.00e-134	472.00
IUUC-Oan-073483	Ornithorhynchus anatinus	36.73	4.00e-163	568.00
IUUC-Ocu-073967	Oryctolagus cuniculus	36.92	3.00e-159	555.00
IUUC-Ola-086640	Oryzias latipes	36.12	1.00e-167	583.00
IUUC-Oar-089710	Ovis aries	37.10	1.00e-165	576.00
IUUC-Ptr-091334	Pan troglodytes	36.91	1.00e-164	573.00
IUUC-Pan-091717	Papio anubis	36.91	4.00e-164	571.00
IUUC-Psi-093933	Pelodiscus sinensis	36.74	4.00e-168	585.00
IUUC-Pab-098231	Pongo abelii	35.43	9.00e-151	527.00
IUUC-Pca-100543	Procavia capensis	35.78	4.00e-93	335.00
IUUC-Sha-107439	Sarcophilus harrisii	36.91	3.00e-164	572.00
IUUC-Sja-107690	Schizosaccharomyces japonicus	34.79	3.00e-150	525.00
IUUC-Sar-113685	Sorex araneus	36.57	3.00e-160	558.00
IUUC-Sre-115156	Sporisorium reilianum	39.27	0.00e+00	703.00
IUUC-Tgu-116767	Taeniopygia guttata	37.03	2.00e-169	589.00
IUUC-Tru-118208	Takifugu rubripes	36.18	6.00e-164	571.00
IUUC-Tsy-119277	Tarsius syrichta	44.92	3.00e-73	269.00
IUUC-Tni-119890	Tetraodon nigroviridis	36.09	5.00e-164	571.00
IUUC-Tre-122169	Trichoderma reesei	35.19	7.00e-169	587.00
IUUC-Tvi-122600	Trichoderma virens	36.23	4.00e-174	605.00
IUUC-Tbe-127696	Tupaia belangeri	42.57	1.00e-67	251.00
IUUC-Uma-129535	Ustilago maydis	39.73	0.00e+00	706.00
IUUC-Vda-129708	Verticillium dahliae	35.23	1.00e-172	600.00
IUUC-Vpa-130141	Vicugna pacos	35.98	4.00e-54	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence