iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050275

Ensembl Protein ID

ENSLACP00000020795.1

UniProt Accession

H3BFX4; H3BFX4_LATCH

Genbank Protein ID

ENSLACP00000020795

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01022408

Gene Name

SEC31B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000018267.1	ENSLACT00000020935.1	ENSLACP00000020795.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-18	66.7	120	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           H+++v++l+f   +++ll++G++D  i++WDl  +
   Q: 120  HSGPVRALDFnpfQNNLLATGANDSEIYIWDLNNF 154
           ***********9866****************9766 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MKLKEIERTA NQAWSPASHH PIFLATGTSA QQLDASFSTN AALEIFELDF GDPSLDMKLR 60
GSLPTHNRFH KLIWGGFGMG SDGSSGVIVS GGDNGAVTLY SATKVLAGGK ETIIGQNEKH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATTGA AAGAAATTGA AAGAACAGCT AATCAGGCTT GGAGCCCTGC CTCCCACCAT 60
CCCATCTTCC TAGCAACAGG TACTTGATAC CAGCAATTTT CTTTAATAGT TTTTCTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR004098--Prp18
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003403	Anas platyrhynchos	58.15	0.00e+00	1276.00
IUUC-Cel-018546	Caenorhabditis elegans	22.87	7.00e-39	155.00
IUUC-Dre-027373	Danio rerio	61.22	0.00e+00	968.00
IUUC-Dor-030341	Dipodomys ordii	49.24	0.00e+00	742.00
IUUC-Eeu-035236	Erinaceus europaeus	54.15	0.00e+00	784.00
IUUC-Fal-037298	Ficedula albicollis	55.22	0.00e+00	1194.00
IUUC-Gmo-039663	Gadus morhua	65.79	0.00e+00	1051.00
IUUC-Gga-040128	Gallus gallus	66.62	0.00e+00	928.00
IUUC-Gac-042070	Gasterosteus aculeatus	61.12	0.00e+00	1030.00
IUUC-Ggo-044594	Gorilla gorilla	48.61	0.00e+00	957.00
IUUC-Itr-048539	Ictidomys tridecemlineatus	56.77	0.00e+00	867.00
IUUC-Loc-052702	Lepisosteus oculatus	61.12	0.00e+00	963.00
IUUC-Meu-056451	Macropus eugenii	49.89	7.00e-111	395.00
IUUC-Mdo-062939	Monodelphis domestica	60.53	0.00e+00	908.00
IUUC-Opr-070212	Ochotona princeps	55.39	0.00e+00	843.00
IUUC-Ont-072481	Oreochromis niloticus	63.97	0.00e+00	1034.00
IUUC-Oan-073744	Ornithorhynchus anatinus	61.14	0.00e+00	962.00
IUUC-Ola-086837	Oryzias latipes	62.70	0.00e+00	1021.00
IUUC-Ppa-095742	Physcomitrella patens	31.80	1.00e-109	391.00
IUUC-Pfo-096678	Poecilia formosa	63.26	0.00e+00	993.00
IUUC-Pab-098721	Pongo abelii	52.67	0.00e+00	801.00
IUUC-Pca-100606	Procavia capensis	51.25	0.00e+00	763.00
IUUC-Tgu-116489	Taeniopygia guttata	57.36	0.00e+00	1192.00
IUUC-Tni-120103	Tetraodon nigroviridis	63.44	0.00e+00	1043.00
IUUC-Ttr-129290	Tursiops truncatus	57.91	1.00e-165	577.00
IUUC-Xtr-132191	Xenopus tropicalis	60.67	0.00e+00	898.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence