iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001203

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

ACTA01106684

Gene Name

WDR53; PANDA_004900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000003780.1	ENSAMET00000004139.1	ENSAMEP00000003978.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-26	89.7	239	277

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +v+ ++f ++  ll++G++Dg+i++WD+++gv  k
   Q: 239  GHTLGVSQVCFlPEsYLLLTGGNDGKIMLWDISSGVEKK 277
           8999********88899***************9999765 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MAVKWTGGHS SPILCLNASQ EGLVASGAEG GDLMAWGEDG TPLGHTRFQG ADDVTSVLFS 60
PSCPTKLYAS HGETISLLDV RSLKGSLDHF HVNEEEINCL SLNETENLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTCA AGTGGACTGG TGGACATTCT TCTCCTATTC TCTGCCTGAA TGCAAGTCAA 60
GAAGGCCTAG TGGCTTCTGG AGCAGAGGGT GGTGATCTCA TGGCTTGGGG TGAAGATGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

KEGG

aml:100477386

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	28.71	8.00e-15	75.10
IUUC-Atr-002680	Amborella trichopoda	25.97	2.00e-23	103.00
IUUC-Apl-003656	Anas platyrhynchos	59.10	2.00e-107	382.00
IUUC-Aca-004987	Anolis carolinensis	63.89	2.00e-125	441.00
IUUC-Aly-006254	Arabidopsis lyrata	30.79	7.00e-29	120.00
IUUC-Ath-006632	Arabidopsis thaliana	29.61	7.00e-27	114.00
IUUC-Ame-011032	Astyanax mexicanus	47.27	8.00e-94	337.00
IUUC-Bta-012588	Bos taurus	86.31	6.00e-171	592.00
IUUC-Bdi-014532	Brachypodium distachyon	26.82	2.00e-26	113.00
IUUC-Bol-015542	Brassica oleracea	27.96	7.00e-21	95.90
IUUC-Bra-017046	Brassica rapa	30.67	3.00e-28	120.00
IUUC-Cja-019365	Callithrix jacchus	92.46	0.00e+00	683.00
IUUC-Cfa-021090	Canis familiaris	96.37	0.00e+00	681.00
IUUC-Cpo-021517	Cavia porcellus	84.40	0.00e+00	629.00
IUUC-Csa-023041	Chlorocebus sabaeus	91.06	0.00e+00	648.00
IUUC-Cho-024801	Choloepus hoffmanni	90.22	0.00e+00	665.00
IUUC-Dre-028437	Danio rerio	48.53	1.00e-87	316.00
IUUC-Dno-029267	Dasypus novemcinctus	90.22	0.00e+00	669.00
IUUC-Ete-032726	Echinops telfairi	73.46	2.00e-152	531.00
IUUC-Eca-033621	Equus caballus	93.52	0.00e+00	627.00
IUUC-Eeu-034461	Erinaceus europaeus	78.21	4.00e-163	566.00
IUUC-Fca-036410	Felis catus	94.69	0.00e+00	663.00
IUUC-Fal-036676	Ficedula albicollis	66.95	5.00e-132	463.00
IUUC-Gmo-039597	Gadus morhua	36.11	4.00e-18	85.50
IUUC-Gga-040760	Gallus gallus	64.82	3.00e-73	267.00
IUUC-Gac-041905	Gasterosteus aculeatus	50.14	2.00e-91	328.00
IUUC-Gma-043066	Glycine max	30.77	1.00e-17	84.00
IUUC-Ggo-044881	Gorilla gorilla	91.62	0.00e+00	651.00
IUUC-Hsa-046836	Homo sapiens	91.34	0.00e+00	648.00
IUUC-Hvu-047651	Hordeum vulgare	25.58	1.00e-24	107.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	91.88	0.00e+00	647.00
IUUC-Lch-050406	Latimeria chalumnae	54.28	1.00e-96	346.00
IUUC-Loc-052878	Lepisosteus oculatus	54.55	1.00e-101	363.00
IUUC-Laf-053547	Loxodonta africana	88.24	0.00e+00	645.00
IUUC-Mcc-054646	Macaca mulatta	91.06	0.00e+00	647.00
IUUC-Meu-056381	Macropus eugenii	76.82	2.00e-163	568.00
IUUC-Mtr-058656	Medicago truncatula	25.87	5.00e-18	85.10
IUUC-Mmr-061601	Microcebus murinus	88.52	0.00e+00	654.00
IUUC-Mdo-062305	Monodelphis domestica	77.37	3.00e-166	577.00
IUUC-Mmu-063213	Mus musculus	84.92	1.00e-173	602.00
IUUC-Mac-064940	Musa acuminata	24.88	9.00e-29	120.00
IUUC-Mpu-066629	Mustela putorius furo	96.37	0.00e+00	679.00
IUUC-Nle-069860	Nomascus leucogenys	91.90	0.00e+00	654.00
IUUC-Opr-071180	Ochotona princeps	83.10	4.00e-152	530.00
IUUC-Ont-071912	Oreochromis niloticus	48.70	8.00e-98	350.00
IUUC-Ocu-074874	Oryctolagus cuniculus	88.83	0.00e+00	661.00
IUUC-Oba-075815	Oryza barthii	29.47	6.00e-14	71.60
IUUC-Obr-076835	Oryza brachyantha	33.33	2.00e-19	89.40
IUUC-Ogu-077977	Oryza glumaepatula	30.00	7.00e-14	71.60
IUUC-Oin-079206	Oryza indica	26.68	4.00e-24	105.00
IUUC-Olo-080621	Oryza longistaminata	28.72	6.00e-13	68.20
IUUC-Ome-081261	Oryza meridionalis	23.88	6.00e-14	71.60
IUUC-Opu-083256	Oryza punctata	23.73	4.00e-15	75.50
IUUC-Osa-085892	Oryza sativa	26.68	4.00e-24	105.00
IUUC-Ola-086701	Oryzias latipes	48.29	4.00e-92	331.00
IUUC-Olu-087593	Ostreococcus lucimarinus	21.81	4.00e-08	52.40
IUUC-Oga-088152	Otolemur garnettii	89.08	0.00e+00	655.00
IUUC-Oar-089681	Ovis aries	91.90	0.00e+00	634.00
IUUC-Ptr-091142	Pan troglodytes	91.62	0.00e+00	650.00
IUUC-Pan-092435	Papio anubis	91.06	1.00e-179	622.00
IUUC-Psi-093255	Pelodiscus sinensis	69.01	6.00e-146	509.00
IUUC-Ppa-095829	Physcomitrella patens	30.06	2.00e-29	122.00
IUUC-Pfo-097339	Poecilia formosa	45.81	6.00e-87	313.00
IUUC-Pab-098274	Pongo abelii	90.78	0.00e+00	632.00
IUUC-Pop-099705	Populus trichocarpa	25.00	2.00e-26	112.00
IUUC-Pca-100451	Procavia capensis	86.48	0.00e+00	647.00
IUUC-Ppe-101220	Prunus persica	25.19	3.00e-25	109.00
IUUC-Pva-102385	Pteropus vampyrus	93.85	0.00e+00	661.00
IUUC-Rno-105765	Rattus norvegicus	83.24	3.00e-171	593.00
IUUC-Sha-106533	Sarcophilus harrisii	75.14	3.00e-162	563.00
IUUC-Smo-109248	Selaginella moellendorffii	27.37	9.00e-30	124.00
IUUC-Sit-110297	Setaria italica	25.55	1.00e-21	96.70
IUUC-Sly-111617	Solanum lycopersicum	31.71	1.00e-24	107.00
IUUC-Stu-112531	Solanum tuberosum	24.88	2.00e-24	106.00
IUUC-Sar-113647	Sorex araneus	82.96	6.00e-179	619.00
IUUC-Sbi-114621	Sorghum bicolor	26.75	1.00e-27	117.00
IUUC-Tgu-116482	Taeniopygia guttata	66.95	6.00e-127	447.00
IUUC-Tru-118622	Takifugu rubripes	49.86	4.00e-88	317.00
IUUC-Tsy-119474	Tarsius syrichta	88.55	0.00e+00	663.00
IUUC-Tni-120250	Tetraodon nigroviridis	47.03	9.00e-80	290.00
IUUC-Tca-121583	Theobroma cacao	27.86	1.00e-28	120.00
IUUC-Tae-123764	Triticum aestivum	33.01	9.00e-25	107.00
IUUC-Tur-126076	Triticum urartu	29.75	4.00e-13	68.90
IUUC-Tbe-127545	Tupaia belangeri	89.64	2.00e-180	624.00
IUUC-Ttr-128497	Tursiops truncatus	92.74	0.00e+00	646.00
IUUC-Vpa-130772	Vicugna pacos	91.62	0.00e+00	644.00
IUUC-Vvi-131632	Vitis vinifera	25.86	3.00e-30	125.00
IUUC-Xma-133432	Xiphophorus maculatus	45.83	3.00e-90	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence