iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095829

Ensembl Protein ID

PP1S17_279V6.1

UniProt Accession

A9RMQ5; A9RMQ5_PHYPA

Genbank Protein ID

EDQ79914.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544906

Gene Name

PHYPADRAFT_203984

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S17_279V6	PP1S17_279V6.1	PP1S17_279V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-19	67.4	300	335

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWDlr 31
           gH++ v+ + f      + llvsG++D  ikvW+++
   Q: 300  GHASIVNHVTFarfgaRGQLLVSGGNDSFIKVWNWT 335
           89*******9999998669***************87 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MANVQQDLQR GLPVRRLEGH TDSVLCCAAH PSFPNVVTSS SEDGSVCVFD IRTTTCCHRL 60
QYFDGQAVVS VLPTSGSEHV LYAAAGSTVY CLDVRQGPTG SPLQTYSFNT EEINQVALNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGTCGTTG CATCAAGCCC AGCCGTAATG CAATAAAACT TAGGGCTCCC CAGCGATTTG 60
GCGACCAAAC TGATTTGGGG TGATTAGCTG CGATGAAGAC AGTTCGCAGT ATCGCATTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_203984

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	39.58	7.00e-60	224.00
IUUC-Aml-001203	Ailuropoda melanoleuca	29.02	1.00e-32	132.00
IUUC-Atr-002680	Amborella trichopoda	42.45	4.00e-71	261.00
IUUC-Apl-003656	Anas platyrhynchos	29.21	4.00e-28	117.00
IUUC-Aca-004987	Anolis carolinensis	29.08	3.00e-31	128.00
IUUC-Aly-006254	Arabidopsis lyrata	37.17	5.00e-66	243.00
IUUC-Ath-006632	Arabidopsis thaliana	37.60	5.00e-66	243.00
IUUC-Ame-011032	Astyanax mexicanus	26.73	8.00e-26	110.00
IUUC-Bta-012588	Bos taurus	29.87	1.00e-35	142.00
IUUC-Bdi-014532	Brachypodium distachyon	39.58	5.00e-68	250.00
IUUC-Bol-015542	Brassica oleracea	36.17	8.00e-57	214.00
IUUC-Bra-017046	Brassica rapa	38.54	1.00e-64	240.00
IUUC-Cja-019365	Callithrix jacchus	28.85	5.00e-34	137.00
IUUC-Cfa-021090	Canis familiaris	29.02	5.00e-35	140.00
IUUC-Cpo-021517	Cavia porcellus	27.32	9.00e-30	123.00
IUUC-Csa-023041	Chlorocebus sabaeus	28.36	1.00e-33	136.00
IUUC-Cho-024801	Choloepus hoffmanni	28.68	4.00e-33	134.00
IUUC-Dre-028437	Danio rerio	28.79	6.00e-20	90.90
IUUC-Dno-029267	Dasypus novemcinctus	26.96	8.00e-32	130.00
IUUC-Ete-032726	Echinops telfairi	22.74	3.00e-13	68.90
IUUC-Eca-033621	Equus caballus	29.60	9.00e-34	136.00
IUUC-Eeu-034461	Erinaceus europaeus	31.27	5.00e-37	147.00
IUUC-Fca-036410	Felis catus	28.12	3.00e-32	132.00
IUUC-Fal-036676	Ficedula albicollis	30.67	2.00e-31	128.00
IUUC-Gac-041905	Gasterosteus aculeatus	29.02	3.00e-29	122.00
IUUC-Gma-044017	Glycine max	41.33	1.00e-71	262.00
IUUC-Ggo-044881	Gorilla gorilla	29.76	6.00e-34	137.00
IUUC-Hsa-046836	Homo sapiens	29.76	2.00e-34	138.00
IUUC-Hvu-047651	Hordeum vulgare	42.33	4.00e-71	261.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	28.12	7.00e-34	137.00
IUUC-Lch-050406	Latimeria chalumnae	27.67	2.00e-23	102.00
IUUC-Lpe-051023	Leersia perrieri	37.35	1.00e-58	219.00
IUUC-Loc-052878	Lepisosteus oculatus	27.05	3.00e-27	114.00
IUUC-Laf-053547	Loxodonta africana	28.36	2.00e-34	138.00
IUUC-Mcc-054646	Macaca mulatta	28.61	4.00e-33	134.00
IUUC-Meu-056381	Macropus eugenii	25.98	2.00e-29	122.00
IUUC-Mtr-058656	Medicago truncatula	42.56	2.00e-72	265.00
IUUC-Mmr-061601	Microcebus murinus	29.10	2.00e-34	139.00
IUUC-Mdo-062305	Monodelphis domestica	26.41	3.00e-30	125.00
IUUC-Mmu-063213	Mus musculus	28.12	2.00e-31	129.00
IUUC-Mac-064940	Musa acuminata	40.73	2.00e-78	285.00
IUUC-Mpu-066629	Mustela putorius furo	28.36	1.00e-33	136.00
IUUC-Nle-069860	Nomascus leucogenys	29.51	5.00e-34	137.00
IUUC-Opr-071180	Ochotona princeps	28.33	2.00e-24	105.00
IUUC-Ont-071912	Oreochromis niloticus	28.44	1.00e-28	119.00
IUUC-Ocu-074874	Oryctolagus cuniculus	29.10	3.00e-34	138.00
IUUC-Oba-075815	Oryza barthii	40.00	1.00e-60	226.00
IUUC-Obr-076835	Oryza brachyantha	42.59	1.00e-60	225.00
IUUC-Ogu-077977	Oryza glumaepatula	39.74	5.00e-60	224.00
IUUC-Oin-079206	Oryza indica	43.83	8.00e-76	276.00
IUUC-Olo-080621	Oryza longistaminata	39.63	8.00e-62	229.00
IUUC-Ome-081261	Oryza meridionalis	39.63	8.00e-59	219.00
IUUC-Oni-082280	Oryza nivara	33.21	1.00e-25	109.00
IUUC-Opu-083256	Oryza punctata	40.05	2.00e-58	219.00
IUUC-Oru-084531	Oryza rufipogon	36.39	9.00e-48	183.00
IUUC-Osa-085892	Oryza sativa	43.83	8.00e-76	276.00
IUUC-Ola-086701	Oryzias latipes	29.50	8.00e-29	120.00
IUUC-Olu-087593	Ostreococcus lucimarinus	23.83	2.00e-17	83.20
IUUC-Oga-088152	Otolemur garnettii	29.43	2.00e-34	139.00
IUUC-Oar-089681	Ovis aries	29.02	2.00e-35	142.00
IUUC-Ptr-091142	Pan troglodytes	29.51	1.00e-33	136.00
IUUC-Pan-092435	Papio anubis	27.88	7.00e-31	127.00
IUUC-Psi-093255	Pelodiscus sinensis	28.02	1.00e-32	133.00
IUUC-Pfo-097339	Poecilia formosa	27.81	6.00e-26	110.00
IUUC-Pab-098274	Pongo abelii	29.51	5.00e-33	134.00
IUUC-Pop-099705	Populus trichocarpa	38.22	4.00e-67	247.00
IUUC-Pca-100451	Procavia capensis	29.35	8.00e-34	137.00
IUUC-Ppe-101220	Prunus persica	39.80	3.00e-78	284.00
IUUC-Pva-102385	Pteropus vampyrus	27.70	9.00e-32	130.00
IUUC-Rno-105765	Rattus norvegicus	27.80	4.00e-31	128.00
IUUC-Sha-106533	Sarcophilus harrisii	25.67	5.00e-29	121.00
IUUC-Smo-108698	Selaginella moellendorffii	43.46	2.00e-81	295.00
IUUC-Sit-110297	Setaria italica	42.71	1.00e-56	212.00
IUUC-Sly-111617	Solanum lycopersicum	41.64	2.00e-72	265.00
IUUC-Stu-112531	Solanum tuberosum	42.18	2.00e-73	268.00
IUUC-Sar-113647	Sorex araneus	27.49	5.00e-30	124.00
IUUC-Sbi-114621	Sorghum bicolor	42.11	2.00e-79	288.00
IUUC-Tgu-116482	Taeniopygia guttata	28.82	3.00e-25	108.00
IUUC-Tru-118622	Takifugu rubripes	27.45	1.00e-24	106.00
IUUC-Tsy-119474	Tarsius syrichta	29.02	1.00e-33	135.00
IUUC-Tni-120250	Tetraodon nigroviridis	24.26	9.00e-16	77.00
IUUC-Tca-121583	Theobroma cacao	41.45	3.00e-80	291.00
IUUC-Tae-125758	Triticum aestivum	41.95	5.00e-69	254.00
IUUC-Tur-126076	Triticum urartu	35.61	2.00e-52	198.00
IUUC-Tbe-127545	Tupaia belangeri	29.10	8.00e-35	140.00
IUUC-Ttr-128497	Tursiops truncatus	29.76	1.00e-35	142.00
IUUC-Vpa-130772	Vicugna pacos	28.16	2.00e-32	132.00
IUUC-Vvi-131632	Vitis vinifera	42.48	2.00e-81	295.00
IUUC-Xma-133432	Xiphophorus maculatus	28.21	9.00e-28	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence