iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-040856

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

SOCS box-containing WD protein SWiP-1

Genbank Nucleotide ID

AADN04000066

Gene Name

WSB1; SWiP-1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000005668.5	ENSGALT00000009090.5	ENSGALP00000009076.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-32	109.0	169	203
UBD/Beta-Prp	9.70e-47	159.9	134	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrtg 33
           Ht+ v++l f +d   +lvs+s+D+t++vWDl+++
   Q: 169  HTEVVRDLTFaPDgsLILVSASRDKTLRVWDLKDD 203
           9**********8865668*************9987 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsf 102
            kf +d+ llatg  +g+ik+wdv tgkll  l +h++ v++++f pdg+ ilv++s+D+t++vwdl+ +g ++ +l+gh++ v+ ++f
   Q: 134  FKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSlILVSASRDKTLRVWDLKdDGNMMKVLRGHQNWVYGCAF 222
           68899999***********************************************************9799****************** PP
   S: 103  spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl............tggh 179
           sp+++ l s ++ + + +wd+++++ ++  l+gh+  v   +++pdg ll+++s+D+ v +Wd   g +lr++             g++
   Q: 223  SPDSSILCSVGASKAVFLWDMDKYSMIR-KLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPYIGVILREFghlfppptpifaGGAN 310
           ****************************.999999999999*******************************************9888* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
           ++ v+s+sf+++g +++s ++d+ v++w + ++     + +  +n ++  fs ++  l+ g++Dgs+ +W 
   Q: 311  DRWVRSVSFSHDGLHIASLADDKMVRFWRIDEE--YPVQVAPLNNGLCCTFSTDGSVLAAGTQDGSVHFWA 379
           ******************************998..68899******************************2 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MASFPLSVNE KLIARSRAVG ELLAPTSPFD KKCGRENWTV AFAPDGSYFA WSQGHRIVKL 60
VPWSQCLTNF LLHGTKNVAN SANARLSRQN SDGSQRNKPC EHIIDCGDIV WSLAFGSSVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGTCTGAG CGCCCGGCGA GCGGCGGTCG CTGTAGCTGT GTTGCGCCCG GCCGTAGGTT 60
TCGCTCCGCG CCCGAGCCGG TCCGAAGGGC GGCCCCGTAG ATGGCCAGCT TTCCCCTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001496--SOCS_box
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50225--SOCS
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07525--SOCS_box
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00253--SOCS
SM00969--SOCS_box
SM00320--WD40

Gene Ontology

GO:0005622--C:intracellular
GO:0035556--P:intracellular signal transduction
GO:0016567--P:protein ubiquitination

KEGG

gga:395685

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001635	Ailuropoda melanoleuca	89.07	0.00e+00	773.00
IUUC-Apl-003903	Anas platyrhynchos	96.59	0.00e+00	827.00
IUUC-Aca-005214	Anolis carolinensis	79.34	0.00e+00	714.00
IUUC-Ame-011740	Astyanax mexicanus	75.53	0.00e+00	677.00
IUUC-Bta-013475	Bos taurus	88.60	0.00e+00	773.00
IUUC-Cja-019053	Callithrix jacchus	88.57	0.00e+00	785.00
IUUC-Cfa-020103	Canis familiaris	88.84	0.00e+00	771.00
IUUC-Cpo-022438	Cavia porcellus	88.60	0.00e+00	787.00
IUUC-Csa-024062	Chlorocebus sabaeus	88.84	0.00e+00	790.00
IUUC-Cho-024334	Choloepus hoffmanni	78.38	0.00e+00	657.00
IUUC-Cin-025590	Ciona intestinalis	40.66	3.00e-79	288.00
IUUC-Csv-026023	Ciona savignyi	39.95	4.00e-78	285.00
IUUC-Dre-028089	Danio rerio	75.77	0.00e+00	683.00
IUUC-Dno-029436	Dasypus novemcinctus	85.40	0.00e+00	635.00
IUUC-Dor-031107	Dipodomys ordii	81.95	0.00e+00	691.00
IUUC-Ete-032326	Echinops telfairi	87.47	0.00e+00	740.00
IUUC-Eca-033401	Equus caballus	89.07	0.00e+00	775.00
IUUC-Eeu-034520	Erinaceus europaeus	86.94	0.00e+00	780.00
IUUC-Fca-036386	Felis catus	88.60	0.00e+00	771.00
IUUC-Fal-036616	Ficedula albicollis	92.16	0.00e+00	796.00
IUUC-Gmo-039335	Gadus morhua	73.22	2.00e-180	624.00
IUUC-Gac-042140	Gasterosteus aculeatus	73.71	0.00e+00	659.00
IUUC-Ggo-044619	Gorilla gorilla	88.36	0.00e+00	789.00
IUUC-Hsa-046300	Homo sapiens	88.36	0.00e+00	787.00
IUUC-Itr-048830	Ictidomys tridecemlineatus	88.36	0.00e+00	786.00
IUUC-Lch-049550	Latimeria chalumnae	81.79	7.00e-173	599.00
IUUC-Loc-051769	Lepisosteus oculatus	77.20	0.00e+00	689.00
IUUC-Laf-054576	Loxodonta africana	88.60	0.00e+00	768.00
IUUC-Mcc-054666	Macaca mulatta	89.31	5.00e-142	496.00
IUUC-Meu-055989	Macropus eugenii	87.43	0.00e+00	639.00
IUUC-Mga-059722	Meleagris gallopavo	96.63	0.00e+00	842.00
IUUC-Mmr-060970	Microcebus murinus	89.07	0.00e+00	770.00
IUUC-Mdo-062249	Monodelphis domestica	76.18	0.00e+00	629.00
IUUC-Mmu-063742	Mus musculus	84.29	0.00e+00	752.00
IUUC-Mpu-066518	Mustela putorius furo	88.36	0.00e+00	791.00
IUUC-Mlu-068063	Myotis lucifugus	88.60	0.00e+00	765.00
IUUC-Nle-069561	Nomascus leucogenys	88.36	0.00e+00	788.00
IUUC-Opr-071158	Ochotona princeps	86.19	0.00e+00	764.00
IUUC-Ont-072542	Oreochromis niloticus	73.24	0.00e+00	654.00
IUUC-Oan-073217	Ornithorhynchus anatinus	89.55	0.00e+00	786.00
IUUC-Ocu-074251	Oryctolagus cuniculus	88.78	0.00e+00	759.00
IUUC-Ola-086549	Oryzias latipes	72.54	0.00e+00	656.00
IUUC-Oga-088382	Otolemur garnettii	89.31	0.00e+00	780.00
IUUC-Oar-090263	Ovis aries	86.94	0.00e+00	771.00
IUUC-Ptr-090922	Pan troglodytes	88.60	0.00e+00	790.00
IUUC-Pan-092518	Papio anubis	88.84	0.00e+00	790.00
IUUC-Psi-093512	Pelodiscus sinensis	93.11	0.00e+00	824.00
IUUC-Pma-094324	Petromyzon marinus	58.33	9.00e-137	479.00
IUUC-Pfo-096264	Poecilia formosa	73.00	0.00e+00	656.00
IUUC-Pab-098018	Pongo abelii	86.70	0.00e+00	771.00
IUUC-Pca-101034	Procavia capensis	87.47	0.00e+00	719.00
IUUC-Pva-102862	Pteropus vampyrus	84.56	0.00e+00	704.00
IUUC-Rno-106116	Rattus norvegicus	85.51	0.00e+00	765.00
IUUC-Sha-106952	Sarcophilus harrisii	87.53	0.00e+00	741.00
IUUC-Sar-113211	Sorex araneus	79.56	2.00e-144	504.00
IUUC-Ssc-116440	Sus scrofa	89.07	0.00e+00	774.00
IUUC-Tgu-116675	Taeniopygia guttata	93.38	0.00e+00	799.00
IUUC-Tru-118295	Takifugu rubripes	72.30	0.00e+00	637.00
IUUC-Tsy-118916	Tarsius syrichta	77.43	0.00e+00	648.00
IUUC-Tni-120302	Tetraodon nigroviridis	71.13	0.00e+00	626.00
IUUC-Tbe-127416	Tupaia belangeri	76.90	1.00e-180	625.00
IUUC-Ttr-128185	Tursiops truncatus	88.60	0.00e+00	771.00
IUUC-Xtr-132465	Xenopus tropicalis	85.00	0.00e+00	751.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence