iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113822

UUCD1 version

UUC-SoB-00077

Ensembl Protein ID

Sb02g018310.1

UniProt Accession

A0A1B6QBJ0; A0A1B6QBJ0_SORBI

Genbank Protein ID

KXG35260.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G150800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g018310	Sb02g018310.1	Sb02g018310.1
Sb02g018310	Sb02g018310.2	Sb02g018310.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-11	45.4	43	69

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf..sd.tllvsGsdDgtikvWDlrt 32
           l++  ++ +llv+++dDg++++WD++ 
   Q: 43   LDYsrNSrHLLVTAGDDGSVHLWDTTA 69
           45676566899*************875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MYNCKDEHLA SISMKGDLIL HNLASGARAA ELSDPNGQVL RVLDYSRNSR HLLVTAGDDG 60
SVHLWDTTAK SPKVSWLKQH SAPTSGVCIS PSSDKTIATV GLDKKLYILD SGSRRPTQTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATAACT GCAAAGATGA ACATTTGGCA TCGATCAGCA TGAAGGGGGA CCTGATTCTT 60
CATAATCTTG CTTCTGGTGC ACGTGCTGCT GAACTTAGCG ATCCAAATGG ACAGGTAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	74.76	0.00e+00	676.00
IUUC-Aml-002397	Ailuropoda melanoleuca	28.81	5.00e-27	115.00
IUUC-Atr-002464	Amborella trichopoda	64.72	2.00e-123	435.00
IUUC-Apl-003870	Anas platyrhynchos	32.93	2.00e-25	110.00
IUUC-Aca-004925	Anolis carolinensis	34.10	3.00e-27	115.00
IUUC-Aly-005931	Arabidopsis lyrata	46.55	1.00e-146	513.00
IUUC-Ath-006681	Arabidopsis thaliana	57.26	3.00e-112	398.00
IUUC-Ame-010906	Astyanax mexicanus	33.15	2.00e-18	87.00
IUUC-Bta-013389	Bos taurus	31.34	2.00e-28	120.00
IUUC-Bdi-014340	Brachypodium distachyon	78.81	0.00e+00	949.00
IUUC-Bol-015773	Brassica oleracea	57.53	1.00e-110	393.00
IUUC-Bra-016623	Brassica rapa	45.92	1.00e-137	483.00
IUUC-Cja-019541	Callithrix jacchus	28.80	7.00e-29	121.00
IUUC-Cfa-021218	Canis familiaris	29.20	5.00e-29	122.00
IUUC-Cpo-021697	Cavia porcellus	33.53	2.00e-28	120.00
IUUC-Csa-023620	Chlorocebus sabaeus	28.80	5.00e-29	122.00
IUUC-Cho-025105	Choloepus hoffmanni	28.80	4.00e-29	122.00
IUUC-Cin-025293	Ciona intestinalis	33.73	9.00e-22	97.80
IUUC-Csv-026234	Ciona savignyi	32.61	2.00e-14	71.60
IUUC-Dre-028251	Danio rerio	34.13	9.00e-23	101.00
IUUC-Dno-029281	Dasypus novemcinctus	32.58	1.00e-26	113.00
IUUC-Dor-031020	Dipodomys ordii	35.90	6.00e-12	65.10
IUUC-Ete-033113	Echinops telfairi	33.71	3.00e-27	115.00
IUUC-Eca-034230	Equus caballus	34.05	4.00e-26	112.00
IUUC-Eeu-034671	Erinaceus europaeus	31.55	7.00e-27	114.00
IUUC-Fca-035775	Felis catus	29.24	3.00e-27	115.00
IUUC-Fal-037557	Ficedula albicollis	32.93	1.00e-24	107.00
IUUC-Gmo-038586	Gadus morhua	33.15	3.00e-21	95.90
IUUC-Gga-040153	Gallus gallus	32.32	1.00e-24	107.00
IUUC-Gac-041385	Gasterosteus aculeatus	33.52	3.00e-20	92.80
IUUC-Gma-043049	Glycine max	51.72	2.00e-166	578.00
IUUC-Ggo-044576	Gorilla gorilla	28.80	6.00e-29	121.00
IUUC-Hsa-046198	Homo sapiens	28.80	4.00e-29	122.00
IUUC-Hvu-047794	Hordeum vulgare	93.33	2.00e-39	153.00
IUUC-Lpe-051469	Leersia perrieri	79.12	0.00e+00	954.00
IUUC-Loc-052816	Lepisosteus oculatus	31.74	6.00e-18	85.10
IUUC-Laf-053880	Loxodonta africana	33.71	2.00e-28	120.00
IUUC-Mcc-054977	Macaca mulatta	28.40	1.00e-28	120.00
IUUC-Meu-056141	Macropus eugenii	34.73	9.00e-28	117.00
IUUC-Mtr-058441	Medicago truncatula	50.82	2.00e-163	568.00
IUUC-Mga-060141	Meleagris gallopavo	30.52	1.00e-25	110.00
IUUC-Mmr-061201	Microcebus murinus	28.06	7.00e-28	118.00
IUUC-Mdo-061855	Monodelphis domestica	34.29	5.00e-28	118.00
IUUC-Mmu-064342	Mus musculus	29.46	6.00e-26	111.00
IUUC-Mac-065368	Musa acuminata	59.45	0.00e+00	673.00
IUUC-Mpu-066191	Mustela putorius furo	28.40	8.00e-28	117.00
IUUC-Mlu-067310	Myotis lucifugus	31.79	3.00e-27	115.00
IUUC-Nle-069990	Nomascus leucogenys	28.80	5.00e-29	122.00
IUUC-Opr-070336	Ochotona princeps	28.96	1.00e-28	120.00
IUUC-Ont-071675	Oreochromis niloticus	34.09	4.00e-23	102.00
IUUC-Oan-072772	Ornithorhynchus anatinus	34.13	5.00e-28	118.00
IUUC-Ocu-074095	Oryctolagus cuniculus	28.80	1.00e-27	117.00
IUUC-Oba-075327	Oryza barthii	79.73	0.00e+00	905.00
IUUC-Obr-076119	Oryza brachyantha	80.42	0.00e+00	923.00
IUUC-Ogl-077820	Oryza glaberrima	79.90	0.00e+00	932.00
IUUC-Ogu-078679	Oryza glumaepatula	79.14	0.00e+00	904.00
IUUC-Oin-079891	Oryza indica	79.57	0.00e+00	905.00
IUUC-Olo-080414	Oryza longistaminata	80.23	0.00e+00	936.00
IUUC-Ome-081888	Oryza meridionalis	77.33	0.00e+00	897.00
IUUC-Oni-082417	Oryza nivara	80.06	0.00e+00	933.00
IUUC-Opu-083393	Oryza punctata	81.35	0.00e+00	983.00
IUUC-Oru-084698	Oryza rufipogon	79.44	0.00e+00	904.00
IUUC-Osa-086121	Oryza sativa	80.06	0.00e+00	933.00
IUUC-Ola-086806	Oryzias latipes	35.96	1.00e-24	107.00
IUUC-Oga-088622	Otolemur garnettii	33.71	7.00e-28	118.00
IUUC-Oar-090391	Ovis aries	32.26	8.00e-29	121.00
IUUC-Ptr-091036	Pan troglodytes	28.80	6.00e-29	121.00
IUUC-Pan-092576	Papio anubis	28.40	1.00e-28	120.00
IUUC-Psi-093450	Pelodiscus sinensis	32.93	4.00e-27	115.00
IUUC-Pma-094101	Petromyzon marinus	35.12	3.00e-26	111.00
IUUC-Ppa-095636	Physcomitrella patens	43.13	5.00e-131	461.00
IUUC-Pfo-097142	Poecilia formosa	31.31	2.00e-22	100.00
IUUC-Pab-097829	Pongo abelii	28.51	7.00e-29	121.00
IUUC-Pop-099687	Populus trichocarpa	63.48	1.00e-119	422.00
IUUC-Pca-100217	Procavia capensis	32.86	7.00e-20	91.30
IUUC-Ppe-101502	Prunus persica	52.08	8.00e-157	546.00
IUUC-Pva-102736	Pteropus vampyrus	32.58	7.00e-27	114.00
IUUC-Rno-104977	Rattus norvegicus	32.02	2.00e-25	110.00
IUUC-Sha-107003	Sarcophilus harrisii	34.29	6.00e-29	121.00
IUUC-Smo-109002	Selaginella moellendorffii	51.45	4.00e-98	351.00
IUUC-Sit-109796	Setaria italica	86.17	0.00e+00	972.00
IUUC-Sly-110941	Solanum lycopersicum	49.53	5.00e-146	511.00
IUUC-Stu-112314	Solanum tuberosum	49.38	2.00e-145	509.00
IUUC-Sar-112926	Sorex araneus	31.05	1.00e-22	100.00
IUUC-Ssc-116242	Sus scrofa	32.93	2.00e-25	109.00
IUUC-Tgu-116765	Taeniopygia guttata	32.93	5.00e-25	108.00
IUUC-Tru-117738	Takifugu rubripes	32.43	3.00e-22	99.40
IUUC-Tsy-118856	Tarsius syrichta	27.89	4.00e-26	112.00
IUUC-Tni-120871	Tetraodon nigroviridis	29.02	2.00e-24	106.00
IUUC-Tca-120965	Theobroma cacao	51.89	2.00e-160	558.00
IUUC-Tae-124830	Triticum aestivum	78.49	0.00e+00	931.00
IUUC-Tur-126840	Triticum urartu	78.48	0.00e+00	887.00
IUUC-Ttr-128551	Tursiops truncatus	27.42	5.00e-20	92.00
IUUC-Vpa-130324	Vicugna pacos	33.15	1.00e-27	117.00
IUUC-Vvi-131699	Vitis vinifera	50.90	2.00e-156	545.00
IUUC-Xtr-131956	Xenopus tropicalis	35.39	4.00e-29	122.00
IUUC-Xma-132982	Xiphophorus maculatus	33.52	4.00e-22	99.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence