iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091389

UUCD1 version

UUC-PaT-00641

Ensembl Protein ID

ENSPTRP00000031909.3

UniProt Accession

H2QTW6; H2QTW6_PANTR

Genbank Protein ID

JAA04879.1; JAA22867.1; JAA39723.1

Protein Name

Nucleoporin 43kDa

Genbank Nucleotide ID

AACZ03045481; GABD01010233; GABE01005016

Gene Name

NUP43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000018697.4	ENSPTRT00000034521.3	ENSPTRP00000031909.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-17	62.8	260	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++++ ++f  s+  +l ++s Dg++  WD +t+v++ks
   Q: 260  HEAEMWEVHFhpSNpEHLFTCSEDGSLWHWDASTDVPEKS 299
           99999******8778********************99986 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MEEIYAKFVS QKISKTRWRP LPPGSLQTAE TFATGSWDNE ENYISLWSIG DFGNLDSDGG 60
FEGDHQLLCD IRHHGDVMDL QFFDQERIVA ASSTGCVTVF LHHPNNQTLS VNQQWTTAHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTTCGGCA TGGAGGAAAT TTATGCGAAG TTTGTGTCTC AGAAAATCAG CAAAACCCGC 60
TGGCGACCGC TGCCTCCGGG AAGTTTACAG ACCGCGGAGA CGTTCGCTAC AGGATCTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring

KEGG

ptr:472151

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	94.74	0.00e+00	723.00
IUUC-Atr-002526	Amborella trichopoda	26.83	1.00e-10	60.80
IUUC-Apl-003533	Anas platyrhynchos	75.82	5.00e-144	503.00
IUUC-Aca-004965	Anolis carolinensis	71.84	8.00e-165	572.00
IUUC-Aly-006431	Arabidopsis lyrata	30.18	7.00e-14	71.20
IUUC-Ath-007253	Arabidopsis thaliana	30.36	8.00e-14	70.90
IUUC-Ame-011694	Astyanax mexicanus	63.55	1.00e-122	432.00
IUUC-Bta-013161	Bos taurus	94.47	0.00e+00	754.00
IUUC-Bdi-014758	Brachypodium distachyon	25.79	2.00e-12	66.60
IUUC-Bol-016489	Brassica oleracea	27.27	3.00e-07	50.80
IUUC-Bra-017838	Brassica rapa	27.27	3.00e-08	52.40
IUUC-Cel-018567	Caenorhabditis elegans	28.47	2.00e-09	56.60
IUUC-Cja-020000	Callithrix jacchus	84.24	0.00e+00	654.00
IUUC-Cfa-021112	Canis familiaris	95.26	0.00e+00	759.00
IUUC-Cpo-022095	Cavia porcellus	90.79	0.00e+00	716.00
IUUC-Csa-023460	Chlorocebus sabaeus	98.68	0.00e+00	753.00
IUUC-Cho-024279	Choloepus hoffmanni	93.82	2.00e-180	624.00
IUUC-Cin-025360	Ciona intestinalis	35.42	3.00e-61	228.00
IUUC-Csv-026301	Ciona savignyi	37.54	7.00e-54	203.00
IUUC-Dre-028097	Danio rerio	61.90	8.00e-137	479.00
IUUC-Dno-029131	Dasypus novemcinctus	93.95	0.00e+00	742.00
IUUC-Dor-030496	Dipodomys ordii	82.68	0.00e+00	647.00
IUUC-Dme-031834	Drosophila melanogaster	26.60	8.00e-43	167.00
IUUC-Ete-032448	Echinops telfairi	91.78	1.00e-170	592.00
IUUC-Eca-034409	Equus caballus	93.95	0.00e+00	742.00
IUUC-Eeu-035343	Erinaceus europaeus	77.89	5.00e-160	556.00
IUUC-Fca-036177	Felis catus	96.05	0.00e+00	763.00
IUUC-Fal-037657	Ficedula albicollis	70.79	1.00e-157	548.00
IUUC-Gmo-038946	Gadus morhua	65.70	1.00e-142	499.00
IUUC-Gga-041070	Gallus gallus	75.00	5.00e-163	566.00
IUUC-Gac-042442	Gasterosteus aculeatus	66.58	1.00e-146	512.00
IUUC-Gma-043812	Glycine max	26.41	2.00e-12	66.20
IUUC-Ggo-045223	Gorilla gorilla	98.95	0.00e+00	781.00
IUUC-Hsa-045956	Homo sapiens	99.74	0.00e+00	786.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	96.06	0.00e+00	765.00
IUUC-Lch-050035	Latimeria chalumnae	71.16	1.00e-161	562.00
IUUC-Laf-053404	Loxodonta africana	91.32	0.00e+00	718.00
IUUC-Mcc-055813	Macaca mulatta	98.68	0.00e+00	752.00
IUUC-Meu-056388	Macropus eugenii	75.68	1.00e-160	558.00
IUUC-Mga-060193	Meleagris gallopavo	73.16	1.00e-169	588.00
IUUC-Mmr-060818	Microcebus murinus	95.53	0.00e+00	759.00
IUUC-Mdo-062822	Monodelphis domestica	88.95	0.00e+00	707.00
IUUC-Mmu-064182	Mus musculus	93.95	0.00e+00	748.00
IUUC-Mac-065317	Musa acuminata	25.00	3.00e-08	52.80
IUUC-Mpu-066865	Mustela putorius furo	95.59	0.00e+00	676.00
IUUC-Mlu-067329	Myotis lucifugus	93.68	0.00e+00	703.00
IUUC-Nle-069093	Nomascus leucogenys	98.95	0.00e+00	783.00
IUUC-Opr-070481	Ochotona princeps	84.78	0.00e+00	671.00
IUUC-Ont-072445	Oreochromis niloticus	67.11	9.00e-149	519.00
IUUC-Oan-073029	Ornithorhynchus anatinus	77.63	3.00e-174	603.00
IUUC-Ocu-074275	Oryctolagus cuniculus	93.42	0.00e+00	747.00
IUUC-Ola-086862	Oryzias latipes	62.96	7.00e-134	469.00
IUUC-Oga-088952	Otolemur garnettii	95.78	0.00e+00	762.00
IUUC-Oar-089300	Ovis aries	95.26	0.00e+00	758.00
IUUC-Pan-092174	Papio anubis	98.95	0.00e+00	754.00
IUUC-Psi-093326	Pelodiscus sinensis	79.47	3.00e-165	573.00
IUUC-Pfo-096331	Poecilia formosa	65.15	8.00e-145	506.00
IUUC-Pab-098306	Pongo abelii	98.68	0.00e+00	781.00
IUUC-Pop-099166	Populus trichocarpa	30.50	6.00e-11	61.60
IUUC-Pca-100455	Procavia capensis	91.33	4.00e-81	295.00
IUUC-Ppe-101380	Prunus persica	28.80	2.00e-12	66.20
IUUC-Pva-102578	Pteropus vampyrus	95.26	0.00e+00	724.00
IUUC-Pgr-103555	Puccinia graminis	37.35	1.00e-08	55.80
IUUC-Rno-105146	Rattus norvegicus	92.89	0.00e+00	711.00
IUUC-Sha-107640	Sarcophilus harrisii	90.03	0.00e+00	719.00
IUUC-Sly-111767	Solanum lycopersicum	28.74	4.00e-10	58.50
IUUC-Stu-112515	Solanum tuberosum	28.74	4.00e-10	58.90
IUUC-Sar-113681	Sorex araneus	94.90	8.00e-110	390.00
IUUC-Sbi-113809	Sorghum bicolor	25.79	7.00e-07	47.80
IUUC-Ssc-116129	Sus scrofa	95.00	0.00e+00	729.00
IUUC-Tgu-117456	Taeniopygia guttata	70.89	4.00e-82	296.00
IUUC-Tru-117630	Takifugu rubripes	67.74	8.00e-100	355.00
IUUC-Tsy-119331	Tarsius syrichta	95.79	0.00e+00	764.00
IUUC-Tni-120077	Tetraodon nigroviridis	64.02	1.00e-135	476.00
IUUC-Tca-121814	Theobroma cacao	28.90	6.00e-10	58.50
IUUC-Tae-123605	Triticum aestivum	26.84	1.00e-12	67.00
IUUC-Tbe-127359	Tupaia belangeri	86.47	0.00e+00	665.00
IUUC-Ttr-128461	Tursiops truncatus	96.05	0.00e+00	735.00
IUUC-Vpa-130162	Vicugna pacos	96.58	0.00e+00	732.00
IUUC-Vvi-131114	Vitis vinifera	28.73	6.00e-12	65.10
IUUC-Xtr-132446	Xenopus tropicalis	68.87	3.00e-156	544.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence