iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-097628

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Josephin-1

Genbank Nucleotide ID

ABGA01111548

Gene Name

JOSD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000011826.2	ENSPPYT00000013729.2	ENSPPYP00000013191.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/Josephin	1.90e-101	337.4	1	201

Active Site

Position(s)	Description	Evidence
35	N/A	{ECO:0000256\|PROSITE-ProRule:PRU00331}
138		{ECO:0000256\|PROSITE-ProRule:PRU00331}
153		{ECO:0000256\|PROSITE-ProRule:PRU00331}

Domain Profile

DUB/Josephin

   S: 1    msqvpg...........aqaapesiyhekqrrelCalhalnnvlqd.elfsreeldeiakrldeeerlqPs.kslldtGnydvnvisaa 76
           ms+vp+           +qaap++iyhekqrrelCalhalnnv+qd ++f+r++l+ei++rl+++++++P+ ks+l++Gnydvnvi+aa
   Q: 1    MSCVPWkgdkakseslePQAAPPQIYHEKQRRELCALHALNNVFQDsNAFTRDTLQEIFQRLSPNTMVTPHkKSMLGNGNYDVNVIMAA 89
           8*********************************************9************************99**************** PP
   S: 77   lkvlGleavwfdkrrelqklaldnvlgfilnlpsslslgllklplkkqhWvtvrkvgkayynldsklkaPeligdetelrkflakllqq 165
           l+++G+eavw+dkrr+++++al+nv+gfi+nlpssl++g+lklplk+qhW++vr+vg+ayynldsklk+Pe+ig+e+elrkfl+++l++
   Q: 90   LQTKGYEAVWWDKRRDVGVIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRG 178
           ***************************************************************************************** PP
   S: 166  kyselllvvkeevedkesdqrldv 189
           k++elllvv+eeve+++s+ r+dv
   Q: 179  KNCELLLVVPEEVEAHQSW-RTDV 201
           *******************.8886 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MSCVPWKGDK AKSESLEPQA APPQIYHEKQ RRELCALHAL NNVFQDSNAF TRDTLQEIFQ 60
RLSPNTMVTP HKKSMLGNGN YDVNVIMAAL QTKGYEAVWW DKRRDVGVIA LTNVMGFIMN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTGTG TGCCATGGAA AGGAGACAAG GCCAAATCTG AATCATTGGA GCTGCCCCCA 60
GGCAGCACCC CCACAAATCT ACCATGAGAA ACAGCGCAGG GAGCTTTGTG CCCTCCACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR006155--Josephin

PROSITE

PS50957--JOSEPHIN

Pfam

PF02099--Josephin

SMART

SM01246--Josephin

Gene Ontology

GO:0016020--C:membrane
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000785	Aegilops tauschii	32.22	1.00e-21	96.30
IUUC-Aml-002429	Ailuropoda melanoleuca	97.03	2.00e-108	384.00
IUUC-Atr-002584	Amborella trichopoda	34.76	1.00e-21	97.10
IUUC-Apl-003240	Anas platyrhynchos	88.67	5.00e-96	342.00
IUUC-Aca-004262	Anolis carolinensis	91.09	3.00e-102	363.00
IUUC-Aly-005621	Arabidopsis lyrata	38.92	4.00e-28	118.00
IUUC-Ath-007306	Arabidopsis thaliana	38.92	6.00e-29	121.00
IUUC-Afl-008651	Aspergillus flavus	31.88	9.40e-02	29.30
IUUC-Ame-011040	Astyanax mexicanus	70.51	1.00e-81	295.00
IUUC-Bta-012440	Bos taurus	97.03	7.00e-109	385.00
IUUC-Bdi-014128	Brachypodium distachyon	33.89	2.00e-24	105.00
IUUC-Bol-015647	Brassica oleracea	37.91	2.00e-29	121.00
IUUC-Bra-017811	Brassica rapa	37.35	7.00e-27	112.00
IUUC-Cel-018568	Caenorhabditis elegans	38.51	5.00e-30	123.00
IUUC-Cja-019461	Callithrix jacchus	98.51	5.00e-110	389.00
IUUC-Cfa-021002	Canis familiaris	97.03	2.00e-108	384.00
IUUC-Cpo-021309	Cavia porcellus	98.02	8.00e-110	389.00
IUUC-Csa-023194	Chlorocebus sabaeus	99.01	7.00e-111	392.00
IUUC-Cho-025019	Choloepus hoffmanni	96.04	2.00e-108	384.00
IUUC-Cin-025666	Ciona intestinalis	61.35	3.00e-54	204.00
IUUC-Csv-026011	Ciona savignyi	56.78	6.00e-58	216.00
IUUC-Cme-027180	Cyanidioschyzon merolae	32.71	4.00e-05	41.20
IUUC-Dre-028692	Danio rerio	69.91	1.00e-80	292.00
IUUC-Dno-029803	Dasypus novemcinctus	96.04	5.00e-108	382.00
IUUC-Dor-030619	Dipodomys ordii	99.29	2.00e-73	268.00
IUUC-Dme-032124	Drosophila melanogaster	45.09	1.00e-39	156.00
IUUC-Ete-032777	Echinops telfairi	95.19	8.00e-105	372.00
IUUC-Eca-034395	Equus caballus	96.53	1.00e-108	385.00
IUUC-Eeu-035075	Erinaceus europaeus	75.74	1.00e-76	278.00
IUUC-Fca-035819	Felis catus	97.03	6.00e-109	385.00
IUUC-Fal-037330	Ficedula albicollis	92.08	5.00e-98	349.00
IUUC-Gmo-038979	Gadus morhua	80.92	1.00e-76	278.00
IUUC-Gga-040456	Gallus gallus	93.10	2.00e-99	354.00
IUUC-Gac-041797	Gasterosteus aculeatus	75.25	4.00e-81	293.00
IUUC-Gma-043620	Glycine max	35.16	4.00e-27	114.00
IUUC-Ggo-045586	Gorilla gorilla	99.50	2.00e-111	394.00
IUUC-Hsa-047008	Homo sapiens	99.50	3.00e-111	393.00
IUUC-Hvu-047184	Hordeum vulgare	33.33	1.00e-21	96.30
IUUC-Itr-048432	Ictidomys tridecemlineatus	97.52	3.00e-109	387.00
IUUC-Lch-049682	Latimeria chalumnae	80.10	3.00e-85	306.00
IUUC-Lpe-051421	Leersia perrieri	32.78	2.00e-22	98.60
IUUC-Loc-051775	Lepisosteus oculatus	80.79	2.00e-77	281.00
IUUC-Laf-054283	Loxodonta africana	96.57	2.00e-107	380.00
IUUC-Mcc-055073	Macaca mulatta	98.96	5.00e-112	396.00
IUUC-Meu-056650	Macropus eugenii	92.57	4.00e-103	366.00
IUUC-Mtr-058745	Medicago truncatula	32.97	3.00e-25	107.00
IUUC-Mga-059703	Meleagris gallopavo	94.06	1.00e-99	355.00
IUUC-Mdo-062114	Monodelphis domestica	93.56	4.00e-105	373.00
IUUC-Mmu-064230	Mus musculus	96.53	2.00e-108	384.00
IUUC-Mac-065631	Musa acuminata	35.37	4.00e-23	102.00
IUUC-Mpu-065845	Mustela putorius furo	96.53	4.00e-108	383.00
IUUC-Mlu-067564	Myotis lucifugus	92.08	1.00e-97	348.00
IUUC-Nfi-068472	Neosartorya fischeri	30.00	2.20e-01	29.30
IUUC-Nle-069516	Nomascus leucogenys	99.01	8.00e-111	392.00
IUUC-Opr-070945	Ochotona princeps	79.70	4.00e-84	303.00
IUUC-Ont-071439	Oreochromis niloticus	69.12	1.00e-78	285.00
IUUC-Oan-073122	Ornithorhynchus anatinus	90.91	9.00e-69	251.00
IUUC-Ocu-074128	Oryctolagus cuniculus	85.12	3.00e-55	206.00
IUUC-Oba-075401	Oryza barthii	31.11	3.00e-21	94.40
IUUC-Obr-076916	Oryza brachyantha	32.78	2.00e-22	99.00
IUUC-Ogl-077194	Oryza glaberrima	31.11	3.00e-21	94.40
IUUC-Ogu-078532	Oryza glumaepatula	31.11	3.00e-21	94.40
IUUC-Oin-079562	Oryza indica	31.68	1.00e-19	89.00
IUUC-Olo-080503	Oryza longistaminata	31.11	4.00e-21	94.00
IUUC-Ome-081997	Oryza meridionalis	31.67	3.00e-21	95.10
IUUC-Oni-082854	Oryza nivara	29.57	3.00e-20	91.70
IUUC-Opu-083984	Oryza punctata	30.56	2.00e-20	92.00
IUUC-Oru-084655	Oryza rufipogon	32.10	2.00e-20	92.00
IUUC-Osa-085854	Oryza sativa	31.11	3.00e-21	94.40
IUUC-Ola-086972	Oryzias latipes	67.46	8.00e-71	259.00
IUUC-Oga-088786	Otolemur garnettii	97.52	2.00e-116	410.00
IUUC-Oar-089212	Ovis aries	96.55	1.00e-107	381.00
IUUC-Ptr-090936	Pan troglodytes	99.50	3.00e-111	393.00
IUUC-Pan-092234	Papio anubis	99.50	3.00e-111	393.00
IUUC-Psi-093448	Pelodiscus sinensis	92.57	2.00e-102	364.00
IUUC-Ppa-095444	Physcomitrella patens	30.68	6.00e-20	90.10
IUUC-Pfo-096711	Poecilia formosa	81.82	5.00e-79	286.00
IUUC-Pop-099793	Populus trichocarpa	35.64	2.00e-22	98.60
IUUC-Pca-100555	Procavia capensis	95.54	2.00e-84	303.00
IUUC-Ppe-102087	Prunus persica	37.43	3.00e-29	120.00
IUUC-Pva-102259	Pteropus vampyrus	97.03	8.00e-109	385.00
IUUC-Rno-105045	Rattus norvegicus	96.53	3.00e-108	383.00
IUUC-Sha-107606	Sarcophilus harrisii	94.06	1.00e-105	375.00
IUUC-Smo-109138	Selaginella moellendorffii	40.34	3.00e-18	84.30
IUUC-Sit-110826	Setaria italica	33.33	6.00e-22	97.10
IUUC-Sly-111452	Solanum lycopersicum	36.87	3.00e-27	114.00
IUUC-Stu-112215	Solanum tuberosum	35.71	1.00e-25	109.00
IUUC-Sbi-114786	Sorghum bicolor	33.33	5.00e-22	97.10
IUUC-Ssc-115663	Sus scrofa	98.02	8.00e-110	389.00
IUUC-Tgu-117374	Taeniopygia guttata	92.08	1.00e-102	364.00
IUUC-Tru-118030	Takifugu rubripes	81.25	4.00e-78	283.00
IUUC-Tsy-119298	Tarsius syrichta	97.52	8.00e-109	385.00
IUUC-Tni-119797	Tetraodon nigroviridis	80.68	8.00e-78	282.00
IUUC-Tca-121220	Theobroma cacao	38.07	2.00e-28	119.00
IUUC-Tae-123012	Triticum aestivum	32.22	1.00e-21	96.30
IUUC-Tur-126618	Triticum urartu	28.48	4.00e-12	64.30
IUUC-Tbe-127896	Tupaia belangeri	98.02	7.00e-110	389.00
IUUC-Ttr-128523	Tursiops truncatus	97.52	7.00e-109	385.00
IUUC-Vpa-130184	Vicugna pacos	94.55	4.00e-111	393.00
IUUC-Vvi-131246	Vitis vinifera	38.55	4.00e-27	114.00
IUUC-Xtr-131903	Xenopus tropicalis	84.58	3.00e-94	337.00
IUUC-Xma-134235	Xiphophorus maculatus	81.46	6.00e-80	290.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence