iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107105

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01031359

Gene Name

EML6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000007063.1	ENSSHAT00000008217.1	ENSSHAP00000008150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-53	174.1	42	80
UBD/Beta-Prp	1.20e-124	415.5	4	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdD..gtikvWDlrtgvll 36
           Ht ++ claf sd  +l+s + D  +t+ +WD+++g+ll
   Q: 42   HTHGIACLAFdSDgQRLASVGLDakNTVCIWDWKKGKLL 80
           99*********999*******9999**********9987 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatg..srdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkghedsvls 99
           ++ +pdk+l+atg  ++d  i +wd  + ++++ l   h+ +++++ f++dg+ l++++ D  +t+++wd ++gk + t +gh+d++ +
   Q: 4    LALHPDKTLVATGqvGKDPYICIWDSYNVQTVSILkDVHTHGIACLAFDSDGQRLASVGLDakNTVCIWDWKKGKLLATATGHSDRIFD 92
           5679********95558999***************777*************************************************** PP
   S: 100  lsfspsg.dklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
           +s++p++ +++vs   ++ i+ w l  +    +  ++ ++ ++ +++++ + + ++  sG+l++ + +W+    +l+rt +g+h   + 
   Q: 93   ISWDPYQpNRVVSC-GVKHIKFWTLCGNALTAKrgIFGKTGDLQTILCLACAKeDVTYSGALNGDIYVWKG--LNLVRTIQGAHSAGIF 178
           *****994555555.5*******99999999889966666666666666666669999***********66..99************** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlq.....t 211
           s+   ++g  +++g++dg ++lwd+      +
   Q: 179  SMYACDEG--FATGGRDGCIRLWDIDfkpitK 208
           ***99965..***************9666652 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

LFSLALHPDK TLVATGQVGK DPYICIWDSY NVQTVSILKD VHTHGIACLA FDSDGQRLAS 60
VGLDAKNTVC IWDWKKGKLL ATATGHSDRI FDISWDPYQP NRVVSCGVKH IKFWTLCGNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTTCAGCC TTGCCTTACA CCCGGATAAA ACCTTGGTTG CAACTGGACA AGTTGGGAAG 60
GATCCTTATA TTTGCATTTG GGATTCTTAC AATGTACAGA CTGTTTCCAT TCTTAAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001387	Ailuropoda melanoleuca	92.79	0.00e+00	3556.00
IUUC-Apl-003604	Anas platyrhynchos	91.40	0.00e+00	3469.00
IUUC-Aca-004572	Anolis carolinensis	87.25	0.00e+00	3360.00
IUUC-Ame-010713	Astyanax mexicanus	78.47	0.00e+00	2999.00
IUUC-Bta-012812	Bos taurus	92.63	0.00e+00	3544.00
IUUC-Cja-019191	Callithrix jacchus	92.47	0.00e+00	3549.00
IUUC-Cfa-020041	Canis familiaris	92.97	0.00e+00	3307.00
IUUC-Csa-023689	Chlorocebus sabaeus	92.22	0.00e+00	3539.00
IUUC-Cho-025038	Choloepus hoffmanni	94.78	0.00e+00	1456.00
IUUC-Csv-026014	Ciona savignyi	61.47	0.00e+00	2394.00
IUUC-Dno-029982	Dasypus novemcinctus	91.46	0.00e+00	3501.00
IUUC-Eca-034161	Equus caballus	91.65	0.00e+00	3496.00
IUUC-Fca-036307	Felis catus	93.10	0.00e+00	3558.00
IUUC-Fal-037332	Ficedula albicollis	88.64	0.00e+00	3412.00
IUUC-Gmo-039057	Gadus morhua	71.89	0.00e+00	2760.00
IUUC-Gac-042555	Gasterosteus aculeatus	77.42	0.00e+00	3021.00
IUUC-Ggo-045107	Gorilla gorilla	92.94	0.00e+00	3557.00
IUUC-Hsa-046482	Homo sapiens	93.00	0.00e+00	3558.00
IUUC-Itr-049023	Ictidomys tridecemlineatus	91.56	0.00e+00	3544.00
IUUC-Lch-050345	Latimeria chalumnae	87.56	0.00e+00	2585.00
IUUC-Loc-052642	Lepisosteus oculatus	85.62	0.00e+00	3253.00
IUUC-Laf-053649	Loxodonta africana	92.36	0.00e+00	3494.00
IUUC-Mcc-055361	Macaca mulatta	92.44	0.00e+00	3191.00
IUUC-Meu-056618	Macropus eugenii	76.22	0.00e+00	1625.00
IUUC-Mga-059202	Meleagris gallopavo	90.50	0.00e+00	3462.00
IUUC-Mmr-060729	Microcebus murinus	92.59	0.00e+00	3539.00
IUUC-Mdo-062462	Monodelphis domestica	96.21	0.00e+00	3645.00
IUUC-Mmu-063865	Mus musculus	91.94	0.00e+00	3540.00
IUUC-Mpu-066724	Mustela putorius furo	93.42	0.00e+00	3569.00
IUUC-Mlu-067816	Myotis lucifugus	92.86	0.00e+00	3563.00
IUUC-Opr-070213	Ochotona princeps	87.74	0.00e+00	1845.00
IUUC-Ont-071928	Oreochromis niloticus	77.03	0.00e+00	3031.00
IUUC-Oan-073563	Ornithorhynchus anatinus	92.70	0.00e+00	3541.00
IUUC-Ocu-074531	Oryctolagus cuniculus	92.79	0.00e+00	3556.00
IUUC-Ola-086943	Oryzias latipes	76.34	0.00e+00	3025.00
IUUC-Olu-087860	Ostreococcus lucimarinus	39.34	1.00e-118	420.00
IUUC-Oga-088665	Otolemur garnettii	92.13	0.00e+00	3530.00
IUUC-Oar-090429	Ovis aries	92.84	0.00e+00	3553.00
IUUC-Ptr-091168	Pan troglodytes	89.03	0.00e+00	2970.00
IUUC-Pan-092788	Papio anubis	95.20	0.00e+00	2997.00
IUUC-Psi-093281	Pelodiscus sinensis	90.04	0.00e+00	3409.00
IUUC-Pma-094424	Petromyzon marinus	71.74	7.00e-123	432.00
IUUC-Pfo-096150	Poecilia formosa	77.34	0.00e+00	2890.00
IUUC-Pab-098561	Pongo abelii	91.78	0.00e+00	3060.00
IUUC-Pca-100177	Procavia capensis	84.52	0.00e+00	1513.00
IUUC-Rno-105002	Rattus norvegicus	91.00	0.00e+00	3524.00
IUUC-Ssc-116282	Sus scrofa	93.21	0.00e+00	3568.00
IUUC-Tgu-116807	Taeniopygia guttata	91.05	0.00e+00	3456.00
IUUC-Tru-118040	Takifugu rubripes	76.38	0.00e+00	2967.00
IUUC-Tni-120118	Tetraodon nigroviridis	73.73	0.00e+00	2944.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence