iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044352

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846

Gene Name

LOC100788493; GLYMA_13G198200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G26820	GLYMA13G26820.1	GLYMA13G26820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-33	112.7	240	273
UBD/Beta-Prp	5.40e-59	201.4	278	438

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           H++sv++l+f  +d  ++s+sdD t+kvWD+ ++
   Q: 240  HKESVRDLSFcrTDLKFCSCSDDTTVKVWDFARC 273
           9**********877889*************8766 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
           sl gh   v++v+++p++++lv+g++D+++k+wd +tg  + +++gh+++vl+++++++g++++++s+d++i+++d++  ++le  ++gh++ v
   Q: 278  SLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELE-SFRGHRKDV 370
           678888899999999999999999999999999999999999999999999999999999999999999999999999999999.999999999 PP
   S: 141  ncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
           +++++hp+   ++vsGs+D+ +  W +  ++   + + +h++ v  l++++ g  l sgs d t k+w
   Q: 371  TTLAWHPFHeEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFW 438
           99999999999999999999999999999999999988999999999999999999999999999999 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MMYNDPQQQQ QQHQYQQQQQ QQHFHHQPPG PEFHRGPLPP SLPPPVMRQG SASSTNLAPE 60
FHHPGPGGPP PPHYDAHSDI HGAKRIRKLT QRKAVDYTST VVRYMQIRMS QRDSRDRTVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGACACAGG TCCAAGTCTC TTCTCACTTT CACCCTTCTT TTATTTCTTT AAACCGAATA 60
CAGGCTAAAT GTTCAAGTTC TAAACAGATG ATTTGAGTAA AACGCCGTCG TTCCTTGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0006379--P:mRNA cleavage

KEGG

gmx:100788493

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	72.46	0.00e+00	691.00
IUUC-Aml-001363	Ailuropoda melanoleuca	56.12	4.00e-132	466.00
IUUC-Apl-003409	Anas platyrhynchos	55.82	3.00e-130	460.00
IUUC-Aca-004694	Anolis carolinensis	55.85	2.00e-131	463.00
IUUC-Aly-006063	Arabidopsis lyrata	80.00	0.00e+00	741.00
IUUC-Ago-007805	Ashbya gossypii	43.48	2.00e-86	312.00
IUUC-Acl-008075	Aspergillus clavatus	41.09	5.00e-95	342.00
IUUC-Afl-008582	Aspergillus flavus	42.51	5.00e-92	332.00
IUUC-Afu-008817	Aspergillus fumigatus	40.72	1.00e-81	297.00
IUUC-Ani-009391	Aspergillus nidulans	39.18	5.00e-85	308.00
IUUC-Ang-009750	Aspergillus niger	43.89	7.00e-78	283.00
IUUC-Aor-010085	Aspergillus oryzae	41.11	1.00e-94	340.00
IUUC-Ate-010397	Aspergillus terreus	41.35	2.00e-94	339.00
IUUC-Ame-010741	Astyanax mexicanus	54.22	3.00e-79	290.00
IUUC-Bta-013265	Bos taurus	56.12	5.00e-132	466.00
IUUC-Bdi-014849	Brachypodium distachyon	74.80	0.00e+00	735.00
IUUC-Bol-015325	Brassica oleracea	75.64	0.00e+00	734.00
IUUC-Bra-017187	Brassica rapa	76.07	0.00e+00	738.00
IUUC-Cja-019547	Callithrix jacchus	56.12	2.00e-132	467.00
IUUC-Cfa-020031	Canis familiaris	56.12	3.00e-132	466.00
IUUC-Cpo-021554	Cavia porcellus	56.28	9.00e-129	454.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	43.29	1.00e-77	284.00
IUUC-Csa-023146	Chlorocebus sabaeus	55.85	5.00e-132	466.00
IUUC-Cho-024679	Choloepus hoffmanni	52.13	2.00e-120	427.00
IUUC-Cin-025415	Ciona intestinalis	53.93	1.00e-123	437.00
IUUC-Csv-026003	Ciona savignyi	52.94	3.00e-121	428.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	44.72	4.00e-98	352.00
IUUC-Cme-027147	Cyanidioschyzon merolae	49.22	8.00e-112	397.00
IUUC-Dre-028545	Danio rerio	56.53	4.00e-132	466.00
IUUC-Dno-029677	Dasypus novemcinctus	56.12	2.00e-132	467.00
IUUC-Dme-031663	Drosophila melanogaster	50.56	3.00e-133	469.00
IUUC-Ete-032511	Echinops telfairi	49.20	4.00e-110	393.00
IUUC-Eca-034152	Equus caballus	56.12	4.00e-132	466.00
IUUC-Eeu-034560	Erinaceus europaeus	42.13	4.00e-43	170.00
IUUC-Fca-035820	Felis catus	56.12	4.00e-132	466.00
IUUC-Fox-037958	Fusarium oxysporum	43.28	7.00e-98	351.00
IUUC-Fso-038162	Fusarium solani	43.10	2.00e-97	349.00
IUUC-Gmo-039708	Gadus morhua	55.29	6.00e-130	458.00
IUUC-Gga-040963	Gallus gallus	56.12	5.00e-132	466.00
IUUC-Gac-041541	Gasterosteus aculeatus	55.41	5.00e-128	452.00
IUUC-Ggo-045564	Gorilla gorilla	56.12	3.00e-132	466.00
IUUC-Hsa-045833	Homo sapiens	56.12	3.00e-132	466.00
IUUC-Hvu-047848	Hordeum vulgare	80.89	3.00e-153	535.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	56.12	4.00e-132	466.00
IUUC-Kpa-049308	Komagataella pastoris	40.26	1.00e-88	319.00
IUUC-Lch-050525	Latimeria chalumnae	56.12	1.00e-131	464.00
IUUC-Loc-052696	Lepisosteus oculatus	56.12	3.00e-133	469.00
IUUC-Lma-052951	Leptosphaeria maculans	46.38	3.00e-99	355.00
IUUC-Laf-053653	Loxodonta africana	56.12	8.00e-132	465.00
IUUC-Mcc-055797	Macaca mulatta	56.12	2.00e-132	467.00
IUUC-Meu-056331	Macropus eugenii	53.61	9.00e-103	369.00
IUUC-Mtr-058032	Medicago truncatula	80.18	0.00e+00	890.00
IUUC-Mla-058852	Melampsora laricipopulina	49.20	2.00e-110	393.00
IUUC-Mga-059311	Meleagris gallopavo	56.12	6.00e-132	465.00
IUUC-Mmr-061143	Microcebus murinus	56.12	3.00e-132	466.00
IUUC-Mdo-061977	Monodelphis domestica	56.12	6.00e-132	465.00
IUUC-Mmu-063922	Mus musculus	56.12	3.00e-132	466.00
IUUC-Mpu-066079	Mustela putorius furo	59.19	1.00e-117	418.00
IUUC-Mlu-067247	Myotis lucifugus	56.12	4.00e-132	466.00
IUUC-Nfi-068255	Neosartorya fischeri	43.01	1.00e-89	323.00
IUUC-Ncr-068909	Neurospora crassa	44.63	4.00e-102	365.00
IUUC-Nle-068994	Nomascus leucogenys	56.12	2.00e-132	467.00
IUUC-Opr-071079	Ochotona princeps	56.12	1.00e-132	468.00
IUUC-Ont-071971	Oreochromis niloticus	55.59	2.00e-130	460.00
IUUC-Oan-073135	Ornithorhynchus anatinus	57.06	6.00e-120	426.00
IUUC-Ocu-073982	Oryctolagus cuniculus	56.12	6.00e-132	465.00
IUUC-Oba-075297	Oryza barthii	75.00	0.00e+00	721.00
IUUC-Ogl-077539	Oryza glaberrima	84.08	6.00e-165	573.00
IUUC-Oin-079229	Oryza indica	79.53	0.00e+00	776.00
IUUC-Olo-080371	Oryza longistaminata	78.62	0.00e+00	704.00
IUUC-Oni-082970	Oryza nivara	75.22	0.00e+00	722.00
IUUC-Ola-087421	Oryzias latipes	56.27	3.00e-132	465.00
IUUC-Oga-088132	Otolemur garnettii	56.12	3.00e-132	466.00
IUUC-Oar-089513	Ovis aries	56.12	5.00e-132	466.00
IUUC-Ptr-090717	Pan troglodytes	56.12	3.00e-132	466.00
IUUC-Pan-092108	Papio anubis	56.12	4.00e-132	466.00
IUUC-Psi-093892	Pelodiscus sinensis	56.12	1.00e-131	464.00
IUUC-Pno-094943	Phaeosphaeria nodorum	43.35	2.00e-100	359.00
IUUC-Ppa-095359	Physcomitrella patens	70.88	0.00e+00	659.00
IUUC-Pfo-096516	Poecilia formosa	55.44	2.00e-129	457.00
IUUC-Pab-097759	Pongo abelii	56.12	2.00e-132	467.00
IUUC-Pva-102918	Pteropus vampyrus	56.12	8.00e-132	465.00
IUUC-Pgr-103594	Puccinia graminis	50.66	4.00e-114	405.00
IUUC-Ptt-103879	Puccinia triticina	52.63	1.00e-96	347.00
IUUC-Pte-104419	Pyrenophora teres	44.08	3.00e-101	362.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	45.65	7.00e-99	354.00
IUUC-Rno-105838	Rattus norvegicus	56.12	3.00e-132	466.00
IUUC-Sce-106331	Saccharomyces cerevisiae	41.10	1.00e-82	300.00
IUUC-Sha-107435	Sarcophilus harrisii	55.82	2.00e-130	460.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	43.55	1.00e-97	350.00
IUUC-Smo-108972	Selaginella moellendorffii	72.27	0.00e+00	662.00
IUUC-Sar-113157	Sorex araneus	56.12	8.00e-132	465.00
IUUC-Sre-115085	Sporisorium reilianum	42.51	1.00e-96	347.00
IUUC-Ssc-116286	Sus scrofa	55.97	1.00e-130	461.00
IUUC-Tgu-117219	Taeniopygia guttata	56.12	6.00e-132	465.00
IUUC-Tru-117550	Takifugu rubripes	56.00	1.00e-130	459.00
IUUC-Tsy-119294	Tarsius syrichta	56.12	2.00e-132	467.00
IUUC-Tni-120561	Tetraodon nigroviridis	55.85	7.00e-132	465.00
IUUC-Tre-122018	Trichoderma reesei	43.89	9.00e-103	367.00
IUUC-Tvi-122413	Trichoderma virens	43.89	2.00e-101	363.00
IUUC-Tae-123904	Triticum aestivum	75.21	0.00e+00	731.00
IUUC-Tbe-127744	Tupaia belangeri	38.03	3.00e-68	254.00
IUUC-Ttr-128777	Tursiops truncatus	49.05	8.00e-104	372.00
IUUC-Vda-129834	Verticillium dahliae	40.29	1.00e-92	333.00
IUUC-Vpa-130563	Vicugna pacos	55.91	1.00e-29	125.00
IUUC-Xtr-132630	Xenopus tropicalis	55.85	3.00e-133	470.00
IUUC-Xma-133665	Xiphophorus maculatus	56.00	5.00e-131	462.00
IUUC-Yli-134556	Yarrowia lipolytica	39.37	2.00e-81	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence