iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000008737.2	ENSPPYT00000033270.1	ENSPPYP00000024006.1
ENSPPYG00000008737.2	ENSPPYT00000010198.1	ENSPPYP00000009807.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	1.10e-12	47.3	582	609

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 2    eaqWaCsaCTflNePeavkCemCsrpRg 29
           +a+WaC++CTf+N+P +++CemCs pR+
   Q: 582  AAMWACQHCTFMNQPGTGHCEMCSLPRT 609
           689***********************95 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MFCLQQIIRV QSPDGVKRIT ATKRETAATF LKKVAKEFGF QNNGFSVYIN RNKTGEITAS 60
SNKSLNLLKI KHGDLLFLFP SSLAGPSSEM ETSAPPGFKV FGAPNVVEDE IDQYLSKQDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGAGGTTG TGCTGAGCCA AGATCGTGCC ATTGCACTCC AGCCTGGGCA ACAAGAGCGA 60
AACTCCATCT CAAAAAAATA AAAATAAAAA AACCACAAAA AATTTTCTGG GCGTGGTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome

Interpro

IPR016563--Npl4
IPR007717--NPL4_C
IPR024682--Npl4_Ub-like_dom
IPR007716--NPL4_Zn-bd_put
IPR029071--Ubiquitin-rel_dom
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF05021--NPL4
PF11543--UN_NPL4
PF05020--zf-NPL4

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0008270--F:zinc ion binding
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000460	Aegilops tauschii	28.41	3.00e-15	76.60
IUUC-Aml-002268	Ailuropoda melanoleuca	97.35	0.00e+00	1210.00
IUUC-Atr-002939	Amborella trichopoda	29.15	3.00e-19	89.40
IUUC-Apl-003496	Anas platyrhynchos	89.19	0.00e+00	1084.00
IUUC-Aca-005230	Anolis carolinensis	91.06	0.00e+00	1160.00
IUUC-Aly-006056	Arabidopsis lyrata	30.12	7.00e-23	101.00
IUUC-Ath-006993	Arabidopsis thaliana	27.86	4.00e-21	95.50
IUUC-Ago-007954	Ashbya gossypii	36.31	6.00e-79	288.00
IUUC-Acl-008208	Aspergillus clavatus	33.70	1.00e-90	327.00
IUUC-Afl-008574	Aspergillus flavus	35.74	1.00e-88	320.00
IUUC-Afu-008825	Aspergillus fumigatus	34.77	5.00e-96	345.00
IUUC-Ani-009495	Aspergillus nidulans	39.28	6.00e-93	335.00
IUUC-Ang-009762	Aspergillus niger	33.78	4.00e-88	318.00
IUUC-Aor-010199	Aspergillus oryzae	35.20	9.00e-87	314.00
IUUC-Ate-010592	Aspergillus terreus	37.57	3.00e-92	332.00
IUUC-Ame-011587	Astyanax mexicanus	72.58	4.00e-104	372.00
IUUC-Bgr-012124	Blumeria graminis	32.58	9.00e-88	317.00
IUUC-Bta-013312	Bos taurus	97.68	0.00e+00	1241.00
IUUC-Bci-013648	Botrytis cinerea	34.03	1.00e-94	340.00
IUUC-Bdi-014326	Brachypodium distachyon	29.09	4.00e-16	79.30
IUUC-Bol-016294	Brassica oleracea	29.03	3.00e-21	95.90
IUUC-Bra-017023	Brassica rapa	28.74	4.00e-21	95.50
IUUC-Cel-018713	Caenorhabditis elegans	43.24	3.00e-129	455.00
IUUC-Cja-018869	Callithrix jacchus	99.00	0.00e+00	1227.00
IUUC-Cfa-020757	Canis familiaris	98.34	0.00e+00	1229.00
IUUC-Cpo-022390	Cavia porcellus	97.70	0.00e+00	1213.00
IUUC-Csa-023366	Chlorocebus sabaeus	99.83	0.00e+00	1265.00
IUUC-Cho-024455	Choloepus hoffmanni	79.10	0.00e+00	840.00
IUUC-Cin-025638	Ciona intestinalis	48.47	2.00e-145	509.00
IUUC-Csv-026310	Ciona savignyi	45.65	9.00e-133	466.00
IUUC-Cgl-026685	Colletotrichum gloeosporioides	33.60	6.00e-90	325.00
IUUC-Cne-026794	Cryptococcus neoformans	29.31	5.00e-72	265.00
IUUC-Cme-027248	Cyanidioschyzon merolae	27.22	3.00e-16	80.10
IUUC-Dre-027689	Danio rerio	80.87	0.00e+00	1042.00
IUUC-Dno-030004	Dasypus novemcinctus	96.52	0.00e+00	1211.00
IUUC-Dor-030585	Dipodomys ordii	96.10	0.00e+00	976.00
IUUC-Dse-031202	Dothistroma septosporum	33.33	2.00e-88	320.00
IUUC-Dme-032092	Drosophila melanogaster	48.02	1.00e-176	613.00
IUUC-Ete-033009	Echinops telfairi	96.53	2.00e-99	355.00
IUUC-Eca-034001	Equus caballus	98.51	0.00e+00	1254.00
IUUC-Eeu-034485	Erinaceus europaeus	81.14	0.00e+00	834.00
IUUC-Fca-036128	Felis catus	97.68	0.00e+00	1186.00
IUUC-Fal-037523	Ficedula albicollis	91.23	0.00e+00	1166.00
IUUC-Fox-037802	Fusarium oxysporum	34.06	8.00e-95	341.00
IUUC-Fso-038152	Fusarium solani	33.95	2.00e-94	339.00
IUUC-Gmo-038486	Gadus morhua	75.12	0.00e+00	949.00
IUUC-Ggr-039916	Gaeumannomyces graminis	37.03	5.00e-85	308.00
IUUC-Gga-041208	Gallus gallus	92.55	0.00e+00	1186.00
IUUC-Gac-042304	Gasterosteus aculeatus	77.99	0.00e+00	978.00
IUUC-Gma-044178	Glycine max	27.27	4.00e-16	79.00
IUUC-Ggo-045236	Gorilla gorilla	96.06	0.00e+00	1215.00
IUUC-Hsa-046334	Homo sapiens	99.50	0.00e+00	1260.00
IUUC-Hvu-047323	Hordeum vulgare	26.48	1.00e-08	53.10
IUUC-Itr-047878	Ictidomys tridecemlineatus	97.56	0.00e+00	728.00
IUUC-Lch-050302	Latimeria chalumnae	83.66	0.00e+00	1063.00
IUUC-Lpe-051362	Leersia perrieri	29.30	4.00e-18	85.90
IUUC-Loc-052548	Lepisosteus oculatus	82.54	0.00e+00	1022.00
IUUC-Lma-053092	Leptosphaeria maculans	34.05	7.00e-96	345.00
IUUC-Laf-053911	Loxodonta africana	96.69	0.00e+00	1227.00
IUUC-Mcc-055830	Macaca mulatta	99.34	0.00e+00	1259.00
IUUC-Meu-056460	Macropus eugenii	58.52	4.00e-149	521.00
IUUC-Mor-057189	Magnaporthe oryzae	36.29	1.00e-87	317.00
IUUC-Mpo-057366	Magnaporthe poae	32.24	2.00e-85	309.00
IUUC-Mtr-057834	Medicago truncatula	27.06	1.00e-17	84.00
IUUC-Mla-059190	Melampsora laricipopulina	33.14	8.00e-85	308.00
IUUC-Mga-060036	Meleagris gallopavo	92.23	0.00e+00	1182.00
IUUC-Mvi-060275	Microbotryum violaceum	35.38	1.00e-78	287.00
IUUC-Mmr-061300	Microcebus murinus	98.03	0.00e+00	1251.00
IUUC-Mdo-062911	Monodelphis domestica	96.32	0.00e+00	1050.00
IUUC-Mmu-063916	Mus musculus	97.68	0.00e+00	1214.00
IUUC-Mac-065601	Musa acuminata	27.16	6.00e-12	65.10
IUUC-Mpu-065912	Mustela putorius furo	97.01	0.00e+00	1211.00
IUUC-Mlu-067965	Myotis lucifugus	95.85	0.00e+00	1190.00
IUUC-Nfi-068465	Neosartorya fischeri	34.60	2.00e-96	346.00
IUUC-Ncr-068936	Neurospora crassa	32.84	8.00e-91	327.00
IUUC-Nle-069570	Nomascus leucogenys	99.17	0.00e+00	1255.00
IUUC-Opr-071097	Ochotona princeps	92.40	0.00e+00	922.00
IUUC-Ont-071430	Oreochromis niloticus	79.87	0.00e+00	1023.00
IUUC-Oan-073709	Ornithorhynchus anatinus	82.89	0.00e+00	794.00
IUUC-Ocu-074875	Oryctolagus cuniculus	91.79	0.00e+00	1155.00
IUUC-Oba-075214	Oryza barthii	28.06	4.00e-18	85.90
IUUC-Obr-076758	Oryza brachyantha	29.15	6.00e-18	84.70
IUUC-Ogl-077665	Oryza glaberrima	28.06	4.00e-18	85.90
IUUC-Ogu-078899	Oryza glumaepatula	28.06	4.00e-18	85.90
IUUC-Oin-079167	Oryza indica	28.06	4.00e-18	85.90
IUUC-Olo-080451	Oryza longistaminata	28.57	3.00e-18	85.90
IUUC-Ome-081836	Oryza meridionalis	28.06	4.00e-18	85.90
IUUC-Oni-083019	Oryza nivara	28.06	4.00e-18	85.90
IUUC-Opu-083122	Oryza punctata	28.62	2.00e-18	86.70
IUUC-Oru-084900	Oryza rufipogon	28.06	4.00e-18	85.90
IUUC-Osa-086054	Oryza sativa	28.06	4.00e-18	85.90
IUUC-Ola-087077	Oryzias latipes	69.18	0.00e+00	854.00
IUUC-Olu-087601	Ostreococcus lucimarinus	26.43	6.00e-06	45.40
IUUC-Oga-088049	Otolemur garnettii	83.99	0.00e+00	1045.00
IUUC-Oar-089678	Ovis aries	97.68	0.00e+00	1242.00
IUUC-Ptr-091380	Pan troglodytes	99.11	0.00e+00	1151.00
IUUC-Pan-092821	Papio anubis	98.18	0.00e+00	1250.00
IUUC-Psi-093074	Pelodiscus sinensis	92.89	0.00e+00	1180.00
IUUC-Pma-094102	Petromyzon marinus	69.34	0.00e+00	903.00
IUUC-Pno-094987	Phaeosphaeria nodorum	34.59	1.00e-93	338.00
IUUC-Ppa-095368	Physcomitrella patens	27.93	3.00e-18	85.90
IUUC-Pfo-097245	Poecilia formosa	81.19	0.00e+00	998.00
IUUC-Pop-099355	Populus trichocarpa	30.77	6.00e-15	74.70
IUUC-Ppe-101990	Prunus persica	28.48	2.00e-18	86.70
IUUC-Pva-102308	Pteropus vampyrus	88.76	0.00e+00	966.00
IUUC-Pgr-103553	Puccinia graminis	32.38	1.00e-80	294.00
IUUC-Pte-104100	Pyrenophora teres	32.45	9.00e-90	324.00
IUUC-Pyt-104482	Pyrenophora triticirepentis	33.39	6.00e-91	328.00
IUUC-Rno-105582	Rattus norvegicus	97.35	0.00e+00	1211.00
IUUC-Sce-106145	Saccharomyces cerevisiae	34.13	5.00e-90	325.00
IUUC-Sha-106647	Sarcophilus harrisii	95.43	0.00e+00	1195.00
IUUC-Sja-107972	Schizosaccharomyces japonicus	35.82	9.00e-86	310.00
IUUC-Spo-108281	Schizosaccharomyces pombe	34.84	2.00e-92	332.00
IUUC-Ssl-108617	Sclerotinia sclerotiorum	39.41	6.00e-91	328.00
IUUC-Smo-108933	Selaginella moellendorffii	30.40	4.00e-19	89.40
IUUC-Sit-110083	Setaria italica	27.86	9.00e-17	81.30
IUUC-Sly-111645	Solanum lycopersicum	26.80	1.00e-16	80.90
IUUC-Stu-112422	Solanum tuberosum	26.80	5.00e-17	82.00
IUUC-Sbi-113987	Sorghum bicolor	29.30	2.00e-17	83.60
IUUC-Sre-115095	Sporisorium reilianum	37.80	2.00e-80	293.00
IUUC-Ssc-116141	Sus scrofa	95.92	0.00e+00	1100.00
IUUC-Tgu-117492	Taeniopygia guttata	90.87	0.00e+00	862.00
IUUC-Tru-118463	Takifugu rubripes	78.26	0.00e+00	974.00
IUUC-Tsy-118993	Tarsius syrichta	89.27	0.00e+00	1010.00
IUUC-Tni-119896	Tetraodon nigroviridis	80.30	0.00e+00	980.00
IUUC-Tca-121169	Theobroma cacao	28.43	4.00e-20	92.40
IUUC-Tre-122046	Trichoderma reesei	33.06	3.00e-91	329.00
IUUC-Tvi-122415	Trichoderma virens	33.44	6.00e-92	331.00
IUUC-Tae-123514	Triticum aestivum	28.41	1.00e-15	77.40
IUUC-Tur-126703	Triticum urartu	45.45	3.70e-01	28.90
IUUC-Tme-127123	Tuber melanosporum	36.02	2.00e-102	366.00
IUUC-Tbe-127629	Tupaia belangeri	92.05	1.00e-157	549.00
IUUC-Ttr-128476	Tursiops truncatus	86.78	0.00e+00	974.00
IUUC-Uma-129492	Ustilago maydis	34.88	2.00e-83	303.00
IUUC-Vda-129702	Verticillium dahliae	36.34	1.00e-88	321.00
IUUC-Vvi-131090	Vitis vinifera	30.41	3.00e-14	72.80
IUUC-Xtr-131786	Xenopus tropicalis	86.09	0.00e+00	1077.00
IUUC-Xma-133997	Xiphophorus maculatus	78.47	0.00e+00	993.00
IUUC-Yli-134537	Yarrowia lipolytica	35.17	7.00e-89	321.00
IUUC-Zma-134847	Zea mays	30.07	1.00e-18	87.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence