iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116262

Ensembl Protein ID

ENSSSCP00000022280.1

UniProt Accession

F1SFN1; F1SFN1_PIG

Genbank Protein ID

ENSSSCP00000022280

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU633640

Gene Name

RYBP

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000025053.1	ENSSSCT00000024414.1	ENSSSCP00000022280.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/NZF	63.89	9.00e-05	43.10	IUUC-Dme-031799
UBD/ZnF/NZF	100.00	1.00e-35	146.00	IUUC-Hsa-046566
UBD/ZnF/NZF	100.00	8.00e-36	146.00	IUUC-Mmu-063177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

RKPRINSQLV AQQVAQQYAT PPPPKKEKKE KVEKQDKEKP EKDKEISPSV TKKNTNKKTK 60
PKSDILKDPP SEANSIQSAN ATTKTSETNH TSRPRLKNVD RSTAQQLAVT VGNVTVIITD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATACCTA AGAAATTATG AGGCCAAAAT TTTTTTTTAA AGAAATACTT AGACAGCAAA 60
TAATGACACA TCTTTTCTTG AATGTTTTAG AAAACCTCGG ATCAATTCTC AGCTGGTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR033774--YAF2_RYBP

Pfam

PF17219--YAF2_RYBP

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0031519--C:PcG protein complex
GO:0003677--F:DNA binding
GO:0003714--F:transcription corepressor activity
GO:0035518--P:histone H2A monoubiquitination
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002182	Ailuropoda melanoleuca	100.00	9.00e-37	147.00
IUUC-Apl-003475	Anas platyrhynchos	96.18	1.00e-34	139.00
IUUC-Aca-004725	Anolis carolinensis	93.89	5.00e-33	134.00
IUUC-Ame-011035	Astyanax mexicanus	68.33	1.00e-13	70.50
IUUC-Bta-012724	Bos taurus	99.24	1.00e-36	145.00
IUUC-Cja-019921	Callithrix jacchus	100.00	3.00e-37	147.00
IUUC-Cfa-020363	Canis familiaris	100.00	4.00e-37	147.00
IUUC-Cpo-022408	Cavia porcellus	100.00	5.00e-37	146.00
IUUC-Csa-023628	Chlorocebus sabaeus	100.00	4.00e-37	147.00
IUUC-Cho-024871	Choloepus hoffmanni	100.00	7.00e-13	65.90
IUUC-Dre-027750	Danio rerio	70.99	2.00e-23	102.00
IUUC-Dno-029292	Dasypus novemcinctus	100.00	5.00e-37	146.00
IUUC-Dor-030691	Dipodomys ordii	100.00	5.00e-37	146.00
IUUC-Dme-031799	Drosophila melanogaster	63.89	3.00e-06	43.90
IUUC-Ete-032320	Echinops telfairi	100.00	5.00e-37	147.00
IUUC-Eca-034330	Equus caballus	100.00	3.00e-37	147.00
IUUC-Eeu-035193	Erinaceus europaeus	89.47	9.00e-20	89.70
IUUC-Fca-035645	Felis catus	100.00	5.00e-37	146.00
IUUC-Fal-036647	Ficedula albicollis	96.18	2.00e-34	139.00
IUUC-Gmo-039120	Gadus morhua	65.74	1.00e-18	86.70
IUUC-Gga-040262	Gallus gallus	96.18	1.00e-34	139.00
IUUC-Gac-041354	Gasterosteus aculeatus	67.86	1.00e-14	73.20
IUUC-Ggo-045026	Gorilla gorilla	100.00	5.00e-37	146.00
IUUC-Hsa-046566	Homo sapiens	100.00	4.00e-37	147.00
IUUC-Itr-048728	Ictidomys tridecemlineatus	97.71	3.00e-35	140.00
IUUC-Lch-050014	Latimeria chalumnae	83.19	5.00e-27	114.00
IUUC-Loc-051746	Lepisosteus oculatus	82.35	3.00e-41	161.00
IUUC-Laf-054352	Loxodonta africana	100.00	4.00e-37	147.00
IUUC-Mcc-055623	Macaca mulatta	100.00	7.00e-37	147.00
IUUC-Meu-056465	Macropus eugenii	69.70	7.00e-08	49.70
IUUC-Mga-059812	Meleagris gallopavo	96.18	2.00e-34	137.00
IUUC-Mmr-061669	Microcebus murinus	97.71	3.00e-42	164.00
IUUC-Mdo-061964	Monodelphis domestica	97.71	1.00e-35	142.00
IUUC-Mmu-063177	Mus musculus	100.00	4.00e-37	147.00
IUUC-Mpu-065711	Mustela putorius furo	100.00	3.00e-37	147.00
IUUC-Mlu-067973	Myotis lucifugus	97.59	1.00e-17	81.60
IUUC-Nle-069817	Nomascus leucogenys	100.00	4.00e-37	147.00
IUUC-Opr-070623	Ochotona princeps	100.00	5.00e-37	146.00
IUUC-Ont-071994	Oreochromis niloticus	68.61	2.00e-23	102.00
IUUC-Oan-072949	Ornithorhynchus anatinus	97.71	1.00e-35	142.00
IUUC-Ocu-074013	Oryctolagus cuniculus	100.00	5.00e-37	147.00
IUUC-Ola-086923	Oryzias latipes	55.95	8.00e-14	69.30
IUUC-Oga-089162	Otolemur garnettii	56.63	1.00e-11	62.40
IUUC-Oar-090312	Ovis aries	99.24	1.00e-36	145.00
IUUC-Ptr-091316	Pan troglodytes	100.00	9.00e-37	147.00
IUUC-Pan-091877	Papio anubis	100.00	4.00e-37	147.00
IUUC-Psi-093195	Pelodiscus sinensis	95.42	8.00e-34	136.00
IUUC-Pma-094646	Petromyzon marinus	67.39	7.00e-13	66.60
IUUC-Pfo-096909	Poecilia formosa	67.88	8.00e-24	103.00
IUUC-Pab-098578	Pongo abelii	100.00	4.00e-37	147.00
IUUC-Pca-100706	Procavia capensis	99.24	4.00e-37	147.00
IUUC-Pva-102682	Pteropus vampyrus	100.00	6.00e-36	143.00
IUUC-Rno-105156	Rattus norvegicus	100.00	4.00e-37	147.00
IUUC-Sha-107156	Sarcophilus harrisii	97.71	1.00e-35	142.00
IUUC-Sar-113234	Sorex araneus	94.66	5.00e-34	137.00
IUUC-Tgu-116730	Taeniopygia guttata	96.18	1.00e-34	139.00
IUUC-Tru-118642	Takifugu rubripes	78.57	1.00e-15	77.00
IUUC-Tsy-119328	Tarsius syrichta	100.00	5.00e-37	146.00
IUUC-Tni-120066	Tetraodon nigroviridis	68.89	2.00e-23	102.00
IUUC-Tbe-127332	Tupaia belangeri	99.24	1.00e-36	145.00
IUUC-Ttr-128963	Tursiops truncatus	100.00	3.00e-37	147.00
IUUC-Vpa-130270	Vicugna pacos	100.00	6.00e-13	65.90
IUUC-Xtr-132256	Xenopus tropicalis	80.14	1.00e-31	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence