iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016534

Ensembl Protein ID

Bo3g048320.1

UniProt Accession

A0A0D3B8G2; A0A0D3B8G2_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g048320	Bo3g048320.1	Bo3g048320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-27	95.3	555	586
UBD/Beta-Prp	2.00e-48	166.6	153	356

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd++t+l+f  d + l+s+s Dg++++WD+
   Q: 555  GHTDRITDLCFsEDgKWLLSSSMDGSLRIWDV 586
           8**********955699**************6 PP

UBD/Beta-Prp

   S: 66   ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtv 161
             + gs+ + +++w+++t k+++ +kg  + v+++ +sp  d++++G +d  i+v +l+ +q++ +++   +g+v+ ++++ dg  ll+sG+  +++
   Q: 153  KVLVGSQEGPLQLWNINTKKMLYQFKGWGSPVCCCVSSPALDVVAIGCADGKIHVHNLKLDQEIVTFEHASRGAVTALSFSTDGrPLLASGGSFGVI 249
           67899************************************************************999***************************** PP
   S: 162  rlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
            +W+l+  +l    + +h++s+ sl+f  n + l+s+s d+++k+w +       + +r   gh+++++++rf +n+ +++s+++D+  r++ + + 
   Q: 250  SIWNLNKRRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDtndgDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQE 346
           **********************************************9996655556699999*****************************988888 PP
   S: 255  dllktlqlhn 264
           +  + l++++
   Q: 347  QQSRELSQRH 356
           8777777776 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGIFEPFRAI GYITSTVPFS VQRLGTETFV TVSVGKAFQI YNCAKLNLVI ISPQLPKKIR 60
ALASYRDFTF AAFGNEIAVF KRAHQVATWS KHVAKVDLLL LFGEHVLSLD VEGNMFIWAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAATCT TCGAACCGTT TAGAGCGATA GGATACATAA CGAGCACTGT TCCTTTCTCC 60
GTTCAGCGAC TGGGCACCGA GACCTTCGTT ACCGTCAGCG TCGGCAAAGC TTTCCAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	67.97	0.00e+00	1236.00
IUUC-Aml-002289	Ailuropoda melanoleuca	37.08	1.00e-153	537.00
IUUC-Atr-002859	Amborella trichopoda	68.95	0.00e+00	1167.00
IUUC-Apl-003505	Anas platyrhynchos	38.77	8.00e-145	507.00
IUUC-Aca-004339	Anolis carolinensis	36.13	4.00e-152	531.00
IUUC-Aly-005913	Arabidopsis lyrata	91.33	0.00e+00	1647.00
IUUC-Ath-006767	Arabidopsis thaliana	90.89	0.00e+00	1641.00
IUUC-Ago-007763	Ashbya gossypii	31.31	3.00e-119	422.00
IUUC-Acl-008275	Aspergillus clavatus	31.04	3.00e-81	296.00
IUUC-Afl-008457	Aspergillus flavus	30.83	5.00e-76	278.00
IUUC-Afu-008914	Aspergillus fumigatus	29.53	5.00e-86	312.00
IUUC-Ani-009225	Aspergillus nidulans	32.02	1.00e-92	334.00
IUUC-Aor-010046	Aspergillus oryzae	30.70	5.00e-106	379.00
IUUC-Ate-010337	Aspergillus terreus	29.98	7.00e-100	358.00
IUUC-Ame-010963	Astyanax mexicanus	36.55	8.00e-149	521.00
IUUC-Bgr-011973	Blumeria graminis	28.90	1.00e-105	377.00
IUUC-Bta-012462	Bos taurus	37.69	2.00e-156	546.00
IUUC-Bci-013940	Botrytis cinerea	29.91	2.00e-118	420.00
IUUC-Bdi-014725	Brachypodium distachyon	69.85	0.00e+00	1276.00
IUUC-Bra-016781	Brassica rapa	96.05	0.00e+00	1679.00
IUUC-Cel-018581	Caenorhabditis elegans	27.28	2.00e-84	306.00
IUUC-Cja-019675	Callithrix jacchus	36.59	8.00e-161	560.00
IUUC-Cfa-020118	Canis familiaris	36.97	3.00e-152	532.00
IUUC-Cpo-021798	Cavia porcellus	36.27	1.00e-150	526.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	32.71	5.00e-47	182.00
IUUC-Csa-023547	Chlorocebus sabaeus	36.97	4.00e-151	528.00
IUUC-Cho-024518	Choloepus hoffmanni	32.30	7.00e-101	361.00
IUUC-Cin-025339	Ciona intestinalis	33.80	5.00e-149	521.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.39	2.00e-104	374.00
IUUC-Cne-026859	Cryptococcus neoformans	33.44	8.00e-137	481.00
IUUC-Cme-027173	Cyanidioschyzon merolae	27.88	2.00e-85	310.00
IUUC-Dre-027733	Danio rerio	34.58	7.00e-146	511.00
IUUC-Dno-029439	Dasypus novemcinctus	37.47	6.00e-149	521.00
IUUC-Dor-030329	Dipodomys ordii	34.37	2.00e-64	240.00
IUUC-Dse-031511	Dothistroma septosporum	28.99	2.00e-95	343.00
IUUC-Dme-031694	Drosophila melanogaster	32.90	3.00e-132	466.00
IUUC-Ete-032930	Echinops telfairi	37.02	2.00e-129	456.00
IUUC-Eca-033302	Equus caballus	36.90	2.00e-150	526.00
IUUC-Eeu-034516	Erinaceus europaeus	37.09	2.00e-162	565.00
IUUC-Fca-036064	Felis catus	36.72	2.00e-149	523.00
IUUC-Fal-037024	Ficedula albicollis	36.55	8.00e-160	557.00
IUUC-Fox-037787	Fusarium oxysporum	30.02	6.00e-95	342.00
IUUC-Fso-038378	Fusarium solani	29.97	3.00e-98	353.00
IUUC-Gmo-039637	Gadus morhua	36.02	2.00e-79	289.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.75	2.00e-100	360.00
IUUC-Gga-040982	Gallus gallus	36.74	3.00e-167	582.00
IUUC-Gac-041565	Gasterosteus aculeatus	35.04	8.00e-137	481.00
IUUC-Gma-043185	Glycine max	74.62	0.00e+00	1388.00
IUUC-Ggo-045463	Gorilla gorilla	36.38	1.00e-151	530.00
IUUC-Hsa-045675	Homo sapiens	36.57	9.00e-154	537.00
IUUC-Hvu-047352	Hordeum vulgare	68.47	0.00e+00	1152.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	35.95	6.00e-161	561.00
IUUC-Kpa-049164	Komagataella pastoris	31.27	1.00e-110	394.00
IUUC-Lch-050476	Latimeria chalumnae	35.91	2.00e-159	556.00
IUUC-Lpe-051556	Leersia perrieri	53.17	0.00e+00	868.00
IUUC-Loc-052820	Lepisosteus oculatus	35.47	4.00e-154	538.00
IUUC-Lma-052961	Leptosphaeria maculans	29.02	4.00e-93	336.00
IUUC-Laf-054006	Loxodonta africana	34.89	1.00e-142	500.00
IUUC-Mcc-055037	Macaca mulatta	36.57	6.00e-153	534.00
IUUC-Mor-057280	Magnaporthe oryzae	29.30	5.00e-99	355.00
IUUC-Mpo-057408	Magnaporthe poae	29.33	2.00e-96	347.00
IUUC-Mtr-058473	Medicago truncatula	73.53	0.00e+00	1363.00
IUUC-Mla-058892	Melampsora laricipopulina	32.10	2.00e-112	399.00
IUUC-Mga-059598	Meleagris gallopavo	32.17	1.00e-115	410.00
IUUC-Mvi-060334	Microbotryum violaceum	32.07	2.00e-109	390.00
IUUC-Mmr-061239	Microcebus murinus	36.52	3.00e-150	526.00
IUUC-Mdo-062471	Monodelphis domestica	36.33	2.00e-146	512.00
IUUC-Mmu-063872	Mus musculus	36.53	1.00e-158	553.00
IUUC-Mac-064631	Musa acuminata	70.81	0.00e+00	1176.00
IUUC-Mpu-066039	Mustela putorius furo	37.08	3.00e-164	572.00
IUUC-Mlu-067485	Myotis lucifugus	36.67	3.00e-150	525.00
IUUC-Nfi-068319	Neosartorya fischeri	29.26	2.00e-94	340.00
IUUC-Ncr-068725	Neurospora crassa	29.42	4.00e-99	356.00
IUUC-Nle-069050	Nomascus leucogenys	36.25	1.00e-152	533.00
IUUC-Opr-070437	Ochotona princeps	40.28	6.00e-44	172.00
IUUC-Ont-071574	Oreochromis niloticus	34.86	1.00e-142	500.00
IUUC-Oan-072826	Ornithorhynchus anatinus	37.99	6.00e-162	564.00
IUUC-Ocu-073995	Oryctolagus cuniculus	37.64	8.00e-146	511.00
IUUC-Oba-075407	Oryza barthii	62.50	0.00e+00	1084.00
IUUC-Obr-076451	Oryza brachyantha	70.41	0.00e+00	1332.00
IUUC-Ogl-077535	Oryza glaberrima	69.36	0.00e+00	1281.00
IUUC-Ogu-077995	Oryza glumaepatula	62.00	0.00e+00	1089.00
IUUC-Oin-079431	Oryza indica	69.85	0.00e+00	1289.00
IUUC-Olo-080495	Oryza longistaminata	61.06	0.00e+00	1058.00
IUUC-Oni-082336	Oryza nivara	67.00	0.00e+00	1206.00
IUUC-Opu-084028	Oryza punctata	64.33	0.00e+00	1092.00
IUUC-Oru-084500	Oryza rufipogon	61.77	0.00e+00	1077.00
IUUC-Osa-086242	Oryza sativa	69.96	0.00e+00	1288.00
IUUC-Ola-086612	Oryzias latipes	34.57	4.00e-110	392.00
IUUC-Olu-087703	Ostreococcus lucimarinus	35.73	2.00e-157	549.00
IUUC-Oga-088572	Otolemur garnettii	37.07	2.00e-153	536.00
IUUC-Oar-090363	Ovis aries	37.67	5.00e-157	548.00
IUUC-Ptr-090477	Pan troglodytes	36.50	8.00e-152	531.00
IUUC-Pan-092914	Papio anubis	36.57	1.00e-153	536.00
IUUC-Psi-093019	Pelodiscus sinensis	35.36	2.00e-149	522.00
IUUC-Pma-094303	Petromyzon marinus	33.18	2.00e-127	449.00
IUUC-Pno-094938	Phaeosphaeria nodorum	28.39	3.00e-86	313.00
IUUC-Ppa-095720	Physcomitrella patens	55.76	0.00e+00	1002.00
IUUC-Pfo-097034	Poecilia formosa	34.10	6.00e-134	471.00
IUUC-Pab-097669	Pongo abelii	36.68	2.00e-153	536.00
IUUC-Pop-098835	Populus trichocarpa	76.97	0.00e+00	1417.00
IUUC-Pca-101097	Procavia capensis	37.25	6.00e-60	225.00
IUUC-Ppe-101430	Prunus persica	75.63	0.00e+00	1425.00
IUUC-Pva-103152	Pteropus vampyrus	37.13	5.00e-156	545.00
IUUC-Pgr-103517	Puccinia graminis	31.64	4.00e-131	462.00
IUUC-Ptt-103697	Puccinia triticina	31.52	2.00e-98	353.00
IUUC-Pte-104121	Pyrenophora teres	28.64	5.00e-93	335.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	28.97	2.00e-94	340.00
IUUC-Rno-105435	Rattus norvegicus	36.29	3.00e-153	535.00
IUUC-Sce-106202	Saccharomyces cerevisiae	30.40	5.00e-103	369.00
IUUC-Sha-107272	Sarcophilus harrisii	38.08	1.00e-145	510.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	36.27	8.00e-151	527.00
IUUC-Spo-108256	Schizosaccharomyces pombe	36.19	8.00e-156	544.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.80	2.00e-113	404.00
IUUC-Smo-108762	Selaginella moellendorffii	56.58	0.00e+00	1011.00
IUUC-Sit-110051	Setaria italica	69.96	0.00e+00	1299.00
IUUC-Sly-111181	Solanum lycopersicum	73.44	0.00e+00	1342.00
IUUC-Stu-112018	Solanum tuberosum	73.77	0.00e+00	1346.00
IUUC-Sar-113348	Sorex araneus	36.05	1.00e-102	367.00
IUUC-Sbi-114282	Sorghum bicolor	69.85	0.00e+00	1313.00
IUUC-Sre-114946	Sporisorium reilianum	29.74	4.00e-79	289.00
IUUC-Ssc-115287	Sus scrofa	37.32	3.00e-155	542.00
IUUC-Tgu-117138	Taeniopygia guttata	35.38	8.00e-129	454.00
IUUC-Tru-118232	Takifugu rubripes	34.76	5.00e-138	485.00
IUUC-Tsy-119502	Tarsius syrichta	30.47	3.00e-104	372.00
IUUC-Tni-120378	Tetraodon nigroviridis	37.33	4.00e-139	488.00
IUUC-Tca-121506	Theobroma cacao	77.28	0.00e+00	1398.00
IUUC-Tre-122166	Trichoderma reesei	29.78	3.00e-110	392.00
IUUC-Tvi-122385	Trichoderma virens	29.92	9.00e-110	391.00
IUUC-Tae-122836	Triticum aestivum	68.67	0.00e+00	1316.00
IUUC-Tur-126490	Triticum urartu	59.14	0.00e+00	999.00
IUUC-Tme-127157	Tuber melanosporum	31.00	6.00e-116	411.00
IUUC-Tbe-127981	Tupaia belangeri	38.74	2.00e-129	456.00
IUUC-Ttr-128886	Tursiops truncatus	36.10	7.00e-149	521.00
IUUC-Uma-129439	Ustilago maydis	29.81	9.00e-88	318.00
IUUC-Vda-129760	Verticillium dahliae	30.20	8.00e-107	381.00
IUUC-Vpa-130456	Vicugna pacos	37.05	3.00e-154	538.00
IUUC-Vvi-131086	Vitis vinifera	75.90	0.00e+00	1433.00
IUUC-Xtr-131829	Xenopus tropicalis	36.93	7.00e-165	574.00
IUUC-Xma-133588	Xiphophorus maculatus	34.53	1.00e-132	467.00
IUUC-Yli-134328	Yarrowia lipolytica	31.59	5.00e-108	385.00
IUUC-Zma-135808	Zea mays	68.87	0.00e+00	1299.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence