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Tag Content
iUUCD ID IUUC-Tca-121613
Ensembl Protein ID EOY26695
UniProt Accession A0A061GAW8; A0A061GAW8_THECC
Genbank Protein ID EOY26695.1; EOY26697.1; EOY26701.1
Protein Name Coatomer subunit beta'
Genbank Nucleotide ID CM001884; CM001884; CM001884
Gene Name TCM_028674
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TCM_028674 EOY26695 EOY26695
TCM_028674 EOY26700 EOY26700
TCM_028674 EOY26696 EOY26696
TCM_028674 EOY26702 EOY26702
TCM_028674 EOY26698 EOY26698
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-35 120.2 184 224
UBD/Beta-Prp 2.70e-66 224.7 14 288
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+ +v+c+++    d ++l++GsdD+t kvWD+ t  ++++
   Q: 184  HQKGVNCVDYftgGDkPYLITGSDDHTAKVWDYQTKSCVQT 224
           999*****966*9778*******************999986 PP
   

   UBD/Beta-Prp
   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdkl 109
           +++++++v+ +p +++++++ ++gt+ +w+++++++ +s++  e +v++ kf  ++++ v g++D++i+v++++t + v ++++h+d++++++++p+  ++
   Q: 14   RSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYV 114
           5678999********************************************************************************************** PP
   S: 110  vsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkelvsgsldgtvklw 207
           +s s+d  i++wd+e+g++  ++++gh++ v+ v+++p++ n ++s+slDrt+++W+l + +   tl   h++ v++++     ++++l++gs+d t k+w
   Q: 115  LSSSDDMLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDtNTFASASLDRTIKIWNLGSPDPNFTLDA-HQKGVNCVDyfTGGDKPYLITGSDDHTAKVW 214
           ******************9999*********************************************98.*********6444555*************** PP
   S: 208  dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlv 281
           d+qt++cv+tl+ght nv+ v f+p+  ++++gs+Dg++riW  ++  l +tl++  ++v+++ +++ ++++++
   Q: 215  DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKGSRRIVI 288
           ***************************************************************99666666554 PP
   
Organism Theobroma cacao
Functional Description
(View)

Functional Description


     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
Protein Sequence
(Fasta)
MPLRLEIKRK LAQRSERVKS VDLHPTEPWI LASLYSGTVC IWNYQSQTMA KSFEVTELPV 60
RSAKFVARKQ WVVAGADDMF IRVYNYNTMD KVKVFEAHTD YIRCVAVHPT LPYVLSSSDD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Tca-121613|E3,WD_repeat;UBD,Beta-Prp|Theobroma cacao
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGTGAGTT TAATTTCTTG ATCTGTTTGA TTCGGCATTA GATCTGGTTC AAATCCCCTT 60
CGATTTGCAC CCATTTCTCA ATTTTCCATA TTATTTATGG AATTGGAAAT GGGAAGAGTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Tca-121613|E3,WD_repeat;UBD,Beta-Prp|Theobroma cacao
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04053--Coatomer_WDAD
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030663--C:COPI-coated vesicle membrane
GO:0000139--C:Golgi membrane
GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000654 Aegilops tauschii 74.89 0.00e+00 1417.00
IUUC-Aml-002154 Ailuropoda melanoleuca 62.06 0.00e+00 1110.00
IUUC-Atr-003090 Amborella trichopoda 81.63 0.00e+00 1551.00
IUUC-Apl-003976 Anas platyrhynchos 61.45 0.00e+00 1107.00
IUUC-Aca-004301 Anolis carolinensis 61.62 0.00e+00 1112.00
IUUC-Aly-006508 Arabidopsis lyrata 88.07 0.00e+00 1662.00
IUUC-Ath-007635 Arabidopsis thaliana 87.46 0.00e+00 1660.00
IUUC-Ago-007914 Ashbya gossypii 46.48 0.00e+00 721.00
IUUC-Acl-008237 Aspergillus clavatus 53.17 0.00e+00 912.00
IUUC-Afl-008535 Aspergillus flavus 54.21 0.00e+00 862.00
IUUC-Afu-008845 Aspergillus fumigatus 53.28 0.00e+00 899.00
IUUC-Ani-009135 Aspergillus nidulans 55.30 0.00e+00 887.00
IUUC-Ang-009654 Aspergillus niger 57.58 0.00e+00 823.00
IUUC-Aor-009939 Aspergillus oryzae 52.73 0.00e+00 921.00
IUUC-Ate-010355 Aspergillus terreus 53.53 0.00e+00 881.00
IUUC-Ame-010922 Astyanax mexicanus 56.17 0.00e+00 964.00
IUUC-Bgr-012249 Blumeria graminis 53.87 0.00e+00 894.00
IUUC-Bta-013579 Bos taurus 61.68 0.00e+00 966.00
IUUC-Bci-013866 Botrytis cinerea 54.48 0.00e+00 900.00
IUUC-Bdi-015046 Brachypodium distachyon 82.70 0.00e+00 1558.00
IUUC-Bol-016271 Brassica oleracea 86.52 0.00e+00 1641.00
IUUC-Bra-017758 Brassica rapa 85.82 0.00e+00 1630.00
IUUC-Cel-018387 Caenorhabditis elegans 53.66 0.00e+00 977.00
IUUC-Cja-019145 Callithrix jacchus 59.32 0.00e+00 1113.00
IUUC-Cfa-020564 Canis familiaris 59.43 0.00e+00 1114.00
IUUC-Cpo-022201 Cavia porcellus 59.27 0.00e+00 1111.00
IUUC-Cre-022938 Chlamydomonas reinhardtii 66.75 0.00e+00 1125.00
IUUC-Csa-023383 Chlorocebus sabaeus 65.79 0.00e+00 838.00
IUUC-Cho-024454 Choloepus hoffmanni 58.48 0.00e+00 919.00
IUUC-Cin-025681 Ciona intestinalis 59.54 0.00e+00 994.00
IUUC-Csv-026012 Ciona savignyi 58.93 0.00e+00 971.00
IUUC-Cgl-026649 Colletotrichum gloeosporioides 50.06 0.00e+00 806.00
IUUC-Cne-026986 Cryptococcus neoformans 49.76 0.00e+00 870.00
IUUC-Cme-027219 Cyanidioschyzon merolae 50.42 0.00e+00 884.00
IUUC-Dre-027846 Danio rerio 61.91 0.00e+00 1112.00
IUUC-Dor-030462 Dipodomys ordii 59.67 0.00e+00 857.00
IUUC-Dse-031268 Dothistroma septosporum 53.85 0.00e+00 900.00
IUUC-Dme-031791 Drosophila melanogaster 57.23 0.00e+00 1011.00
IUUC-Ete-033166 Echinops telfairi 58.57 0.00e+00 706.00
IUUC-Eca-034180 Equus caballus 60.53 0.00e+00 1067.00
IUUC-Eeu-035086 Erinaceus europaeus 48.30 5.00e-126 444.00
IUUC-Fca-036265 Felis catus 62.11 0.00e+00 1111.00
IUUC-Fal-037202 Ficedula albicollis 60.85 0.00e+00 1058.00
IUUC-Fox-037711 Fusarium oxysporum 54.17 0.00e+00 856.00
IUUC-Fso-038268 Fusarium solani 53.76 0.00e+00 858.00
IUUC-Gmo-039046 Gadus morhua 61.31 0.00e+00 1100.00
IUUC-Ggr-039863 Gaeumannomyces graminis 53.13 0.00e+00 876.00
IUUC-Gga-041112 Gallus gallus 61.99 0.00e+00 1113.00
IUUC-Gac-041733 Gasterosteus aculeatus 61.06 0.00e+00 1069.00
IUUC-Gma-044086 Glycine max 91.74 0.00e+00 1719.00
IUUC-Ggo-044984 Gorilla gorilla 59.39 0.00e+00 1113.00
IUUC-Hsa-046698 Homo sapiens 59.32 0.00e+00 1113.00
IUUC-Hvu-047669 Hordeum vulgare 91.53 0.00e+00 703.00
IUUC-Itr-048212 Ictidomys tridecemlineatus 62.06 0.00e+00 1108.00
IUUC-Kpa-049265 Komagataella pastoris 51.15 0.00e+00 843.00
IUUC-Lch-050473 Latimeria chalumnae 60.02 0.00e+00 1113.00
IUUC-Lpe-051579 Leersia perrieri 83.52 0.00e+00 1559.00
IUUC-Loc-052675 Lepisosteus oculatus 59.95 0.00e+00 1113.00
IUUC-Lma-053218 Leptosphaeria maculans 52.32 0.00e+00 868.00
IUUC-Laf-053757 Loxodonta africana 59.43 0.00e+00 1109.00
IUUC-Mcc-054859 Macaca mulatta 59.32 0.00e+00 1113.00
IUUC-Meu-056174 Macropus eugenii 51.33 3.00e-108 385.00
IUUC-Mor-057264 Magnaporthe oryzae 53.50 0.00e+00 867.00
IUUC-Mpo-057538 Magnaporthe poae 52.88 0.00e+00 881.00
IUUC-Mtr-058618 Medicago truncatula 91.10 0.00e+00 1674.00
IUUC-Mla-058937 Melampsora laricipopulina 53.52 0.00e+00 895.00
IUUC-Mga-059875 Meleagris gallopavo 61.84 0.00e+00 1109.00
IUUC-Mvi-060240 Microbotryum violaceum 50.56 0.00e+00 914.00
IUUC-Mmr-061261 Microcebus murinus 59.32 0.00e+00 1112.00
IUUC-Mdo-062076 Monodelphis domestica 62.23 0.00e+00 1117.00
IUUC-Mmu-063324 Mus musculus 62.11 0.00e+00 1113.00
IUUC-Mac-064636 Musa acuminata 86.04 0.00e+00 1620.00
IUUC-Mpu-065961 Mustela putorius furo 62.11 0.00e+00 1110.00
IUUC-Mlu-067059 Myotis lucifugus 59.38 0.00e+00 1101.00
IUUC-Nfi-068277 Neosartorya fischeri 53.12 0.00e+00 890.00
IUUC-Ncr-068659 Neurospora crassa 53.00 0.00e+00 897.00
IUUC-Nle-069034 Nomascus leucogenys 59.32 0.00e+00 1114.00
IUUC-Opr-070334 Ochotona princeps 62.28 0.00e+00 1002.00
IUUC-Ont-071563 Oreochromis niloticus 62.03 0.00e+00 1112.00
IUUC-Oan-073416 Ornithorhynchus anatinus 61.36 0.00e+00 1051.00
IUUC-Ocu-074522 Oryctolagus cuniculus 59.45 0.00e+00 1110.00
IUUC-Oba-075760 Oryza barthii 84.62 0.00e+00 1573.00
IUUC-Obr-076163 Oryza brachyantha 83.79 0.00e+00 1572.00
IUUC-Ogl-077450 Oryza glaberrima 85.62 0.00e+00 1600.00
IUUC-Ogu-078994 Oryza glumaepatula 84.62 0.00e+00 1570.00
IUUC-Oin-079211 Oryza indica 83.59 0.00e+00 1531.00
IUUC-Olo-080731 Oryza longistaminata 83.71 0.00e+00 1554.00
IUUC-Ome-081762 Oryza meridionalis 81.40 0.00e+00 1446.00
IUUC-Oni-082324 Oryza nivara 84.62 0.00e+00 1572.00
IUUC-Opu-083400 Oryza punctata 80.89 0.00e+00 1530.00
IUUC-Oru-084829 Oryza rufipogon 84.75 0.00e+00 1575.00
IUUC-Osa-086026 Oryza sativa 85.79 0.00e+00 1587.00
IUUC-Ola-087245 Oryzias latipes 61.26 0.00e+00 1104.00
IUUC-Olu-087655 Ostreococcus lucimarinus 67.20 0.00e+00 1157.00
IUUC-Oga-088163 Otolemur garnettii 59.81 0.00e+00 1056.00
IUUC-Oar-089842 Ovis aries 59.32 0.00e+00 1114.00
IUUC-Ptr-090501 Pan troglodytes 59.32 0.00e+00 1113.00
IUUC-Pan-092011 Papio anubis 59.32 0.00e+00 1113.00
IUUC-Psi-093308 Pelodiscus sinensis 61.86 0.00e+00 1111.00
IUUC-Pma-094695 Petromyzon marinus 58.69 0.00e+00 982.00
IUUC-Pno-094785 Phaeosphaeria nodorum 59.45 1.00e-104 373.00
IUUC-Ppa-095911 Physcomitrella patens 79.54 0.00e+00 1447.00
IUUC-Pfo-096587 Poecilia formosa 61.55 0.00e+00 1108.00
IUUC-Pab-097926 Pongo abelii 58.14 0.00e+00 1045.00
IUUC-Pop-099634 Populus trichocarpa 91.40 0.00e+00 1696.00
IUUC-Pca-100965 Procavia capensis 61.09 0.00e+00 1074.00
IUUC-Ppe-101470 Prunus persica 91.56 0.00e+00 1729.00
IUUC-Pva-102451 Pteropus vampyrus 58.62 0.00e+00 851.00
IUUC-Pgr-103453 Puccinia graminis 53.60 0.00e+00 907.00
IUUC-Ptt-103868 Puccinia triticina 53.85 0.00e+00 906.00
IUUC-Pte-104274 Pyrenophora teres 53.24 0.00e+00 897.00
IUUC-Pyt-104794 Pyrenophora triticirepentis 52.42 0.00e+00 846.00
IUUC-Rno-105979 Rattus norvegicus 53.71 0.00e+00 816.00
IUUC-Sce-106269 Saccharomyces cerevisiae 46.85 0.00e+00 747.00
IUUC-Sha-106905 Sarcophilus harrisii 60.54 0.00e+00 1117.00
IUUC-Sja-107838 Schizosaccharomyces japonicus 46.65 0.00e+00 775.00
IUUC-Spo-108299 Schizosaccharomyces pombe 46.84 0.00e+00 802.00
IUUC-Smo-108695 Selaginella moellendorffii 81.13 0.00e+00 1406.00
IUUC-Sit-110239 Setaria italica 85.23 0.00e+00 1623.00
IUUC-Sly-111775 Solanum lycopersicum 87.23 0.00e+00 1659.00
IUUC-Stu-112906 Solanum tuberosum 86.39 0.00e+00 1503.00
IUUC-Sar-113472 Sorex araneus 57.26 0.00e+00 764.00
IUUC-Sbi-113801 Sorghum bicolor 82.39 0.00e+00 1556.00
IUUC-Sre-115040 Sporisorium reilianum 52.68 0.00e+00 904.00
IUUC-Ssc-115593 Sus scrofa 61.99 0.00e+00 1110.00
IUUC-Tgu-117239 Taeniopygia guttata 61.70 0.00e+00 1108.00
IUUC-Tru-118025 Takifugu rubripes 61.47 0.00e+00 1105.00
IUUC-Tsy-118824 Tarsius syrichta 58.10 0.00e+00 788.00
IUUC-Tni-120142 Tetraodon nigroviridis 61.38 0.00e+00 1098.00
IUUC-Tre-122072 Trichoderma reesei 53.01 0.00e+00 888.00
IUUC-Tvi-122546 Trichoderma virens 52.76 0.00e+00 871.00
IUUC-Tae-125292 Triticum aestivum 84.62 0.00e+00 1612.00
IUUC-Tur-126283 Triticum urartu 76.01 0.00e+00 1419.00
IUUC-Tme-127041 Tuber melanosporum 53.68 0.00e+00 912.00
IUUC-Tbe-127770 Tupaia belangeri 60.75 0.00e+00 890.00
IUUC-Ttr-129294 Tursiops truncatus 59.20 0.00e+00 1110.00
IUUC-Uma-129351 Ustilago maydis 50.97 0.00e+00 888.00
IUUC-Vda-129716 Verticillium dahliae 52.96 0.00e+00 903.00
IUUC-Vpa-130037 Vicugna pacos 51.62 2.00e-129 456.00
IUUC-Vvi-131689 Vitis vinifera 94.88 0.00e+00 1691.00
IUUC-Xtr-132633 Xenopus tropicalis 61.74 0.00e+00 1110.00
IUUC-Xma-133347 Xiphophorus maculatus 61.79 0.00e+00 1110.00
IUUC-Yli-134455 Yarrowia lipolytica 50.51 0.00e+00 804.00
IUUC-Zma-135706 Zea mays 82.75 0.00e+00 1585.00
Created Date 25-Jun-2017

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