iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007388

UUCD1 version

UUC-ArT-01332

Ensembl Protein ID

AT4G13490.1

UniProt Accession

Q9T0H0; Q9T0H0_ARATH

Genbank Protein ID

AEE83285.1; CAB41107.1; CAB78391.1

Protein Name

Putative uncharacterized protein AT4g13490; Putative uncharacterized protein T6G15.40; RING/U-box superfamily protein

Genbank Nucleotide ID

CP002687; AL049656; AL161536

Gene Name

At4g13490; T6G15.40; T6G15_40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G13490	AT4G13490.1	AT4G13490.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-07	30.5	22	68

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle++     ++ ++ l+C H fh+dC    +g++ + +++  CP Cr
   Q: 22   CAVCLEPLandadERTVVKLRCSHKFHLDC----VGSSFNIKNKMECPCCR 68
           ********99888666999***********....69999***********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSLESDIKES KRVVEPFDDD DCAVCLEPLA NDADERTVVK LRCSHKFHLD CVGSSFNIKN 60
KMECPCCRQI EKGKWLFAEP VDQLEEDDMS PLDMLTNMVS PSFLHIDDGI FTNIASVLFP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTAG AGAGTGATAT CAAAGAAAGC AAACGAGTCG TTGAACCATT TGATGATGAC 60
GATTGTGCGG TTTGTTTGGA GCCGTTGGCT AATGATGCTG ACGAACGAAC TGTTGTTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF17123--zf-RING_11

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ath:AT4G13490

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005007	Anolis carolinensis	26.83	5.00e-05	42.40
IUUC-Aly-006395	Arabidopsis lyrata	45.36	2.00e-36	144.00
IUUC-Ame-010680	Astyanax mexicanus	29.29	6.00e-07	47.80
IUUC-Cfa-020475	Canis familiaris	30.00	7.00e-05	41.60
IUUC-Csv-026089	Ciona savignyi	33.33	2.00e-06	47.00
IUUC-Dno-029115	Dasypus novemcinctus	30.00	6.00e-05	42.00
IUUC-Fca-035528	Felis catus	28.75	1.00e-04	40.80
IUUC-Fal-037476	Ficedula albicollis	31.25	1.00e-05	43.90
IUUC-Meu-056652	Macropus eugenii	31.33	5.00e-06	45.40
IUUC-Mga-060182	Meleagris gallopavo	31.25	4.00e-05	42.40
IUUC-Mdo-062910	Monodelphis domestica	31.33	5.00e-06	45.40
IUUC-Mlu-067664	Myotis lucifugus	30.00	6.00e-05	42.00
IUUC-Psi-093479	Pelodiscus sinensis	32.93	2.00e-05	43.90
IUUC-Pca-100457	Procavia capensis	30.00	9.00e-05	40.80
IUUC-Sha-107480	Sarcophilus harrisii	31.33	6.00e-06	44.70
IUUC-Ssc-116338	Sus scrofa	30.00	8.00e-05	41.60
IUUC-Tgu-116484	Taeniopygia guttata	32.50	6.00e-06	44.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence