iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107550

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01176543

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000005169.1	ENSSHAT00000005980.1	ENSSHAP00000005926.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-45	151.8	591	629
UBD/Beta-Prp	7.40e-96	321.0	554	711

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v c++   d  l+++Gs D ++k+W l+ g++ +
   Q: 591  GHKLPVLCMDIsYDgALIATGSADRNVKIWGLDFGDCHR 629
           79999***988845599*******************977 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           + cv +sp+++lla++  d t+k++ v+t k++ sl+gh+ +v ++++s dg +++tgs Dr++k+w l+ g+c ++l +h+ds+++l+
   Q: 554  VLCVRYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSIMCLQ 642
           456************************************************************************************** PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           f  +++ + ++++d  i+ wd +  + ++ tl+gh++ v+c++v+p+g+++vs+s D+ +rlW    + l
   Q: 643  FVSKSHLFFTAGKDHKIKQWDADRFEHIQ-TLEGHHQEVWCLAVSPNGDYVVSSSHDKSLRLWERTKEPL 711
           *****************************.*********************************9854444 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MGLTKQYLRY AASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DTRKGEKILI 60
LQGLKHEVTC LCPSPDGLHL SVGYEDGSIR IFSLLSGEGN ITFNGHKAAV TALNYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCTCA CCAAGCAGTA CCTGCGTTAT GCTGCCAGTG CTGTCTTTGG ATTGATTGGC 60
AGCCAAAAGG GCAACATTGT CTTTGTAACT TTGCGTGGTG AGAAGGGGCG CTACGTGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	36.45	2.00e-144	506.00
IUUC-Aml-001245	Ailuropoda melanoleuca	87.13	0.00e+00	1575.00
IUUC-Atr-002700	Amborella trichopoda	39.37	2.00e-173	603.00
IUUC-Apl-004164	Anas platyrhynchos	76.97	0.00e+00	1056.00
IUUC-Aca-004765	Anolis carolinensis	74.84	0.00e+00	1367.00
IUUC-Aly-006503	Arabidopsis lyrata	39.07	2.00e-173	602.00
IUUC-Ath-006848	Arabidopsis thaliana	38.75	8.00e-174	603.00
IUUC-Ago-007909	Ashbya gossypii	34.80	2.00e-144	506.00
IUUC-Acl-008238	Aspergillus clavatus	37.29	7.00e-178	617.00
IUUC-Afl-008544	Aspergillus flavus	37.51	7.00e-173	601.00
IUUC-Afu-008868	Aspergillus fumigatus	37.53	3.00e-175	608.00
IUUC-Ani-009367	Aspergillus nidulans	37.01	1.00e-170	593.00
IUUC-Ang-009732	Aspergillus niger	37.69	3.00e-176	612.00
IUUC-Aor-010140	Aspergillus oryzae	37.58	1.00e-173	603.00
IUUC-Ate-010572	Aspergillus terreus	37.91	7.00e-174	605.00
IUUC-Ame-010956	Astyanax mexicanus	70.50	0.00e+00	786.00
IUUC-Bgr-012296	Blumeria graminis	36.35	2.00e-167	582.00
IUUC-Bta-012716	Bos taurus	86.50	0.00e+00	1606.00
IUUC-Bci-013699	Botrytis cinerea	35.62	3.00e-156	546.00
IUUC-Bdi-014525	Brachypodium distachyon	37.21	3.00e-156	545.00
IUUC-Bol-015117	Brassica oleracea	38.90	5.00e-171	594.00
IUUC-Bra-016869	Brassica rapa	39.21	9.00e-172	597.00
IUUC-Cel-018570	Caenorhabditis elegans	33.30	3.00e-126	446.00
IUUC-Cja-019425	Callithrix jacchus	86.92	0.00e+00	1571.00
IUUC-Cfa-020787	Canis familiaris	86.81	0.00e+00	1599.00
IUUC-Cpo-021729	Cavia porcellus	87.30	0.00e+00	1122.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.01	2.00e-104	373.00
IUUC-Csa-024098	Chlorocebus sabaeus	86.71	0.00e+00	1570.00
IUUC-Cho-024495	Choloepus hoffmanni	72.22	0.00e+00	881.00
IUUC-Cin-025245	Ciona intestinalis	48.03	2.00e-166	578.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.38	3.00e-162	565.00
IUUC-Cne-026835	Cryptococcus neoformans	45.41	8.00e-126	444.00
IUUC-Cme-027162	Cyanidioschyzon merolae	25.91	2.00e-39	157.00
IUUC-Dre-027874	Danio rerio	69.83	0.00e+00	1273.00
IUUC-Dno-028905	Dasypus novemcinctus	86.29	0.00e+00	1584.00
IUUC-Dor-030383	Dipodomys ordii	82.77	0.00e+00	784.00
IUUC-Dse-031297	Dothistroma septosporum	36.48	2.00e-163	569.00
IUUC-Dme-031956	Drosophila melanogaster	42.24	0.00e+00	665.00
IUUC-Ete-032608	Echinops telfairi	77.55	0.00e+00	878.00
IUUC-Eca-034181	Equus caballus	85.65	0.00e+00	1552.00
IUUC-Eeu-034495	Erinaceus europaeus	86.18	0.00e+00	1505.00
IUUC-Fca-035994	Felis catus	86.55	0.00e+00	1483.00
IUUC-Fal-036611	Ficedula albicollis	76.86	0.00e+00	1325.00
IUUC-Fox-037807	Fusarium oxysporum	36.42	1.00e-163	570.00
IUUC-Fso-038090	Fusarium solani	36.52	2.00e-161	563.00
IUUC-Gmo-039018	Gadus morhua	62.45	0.00e+00	689.00
IUUC-Ggr-039748	Gaeumannomyces graminis	36.61	5.00e-164	571.00
IUUC-Gga-040707	Gallus gallus	79.63	0.00e+00	1357.00
IUUC-Gac-042334	Gasterosteus aculeatus	63.55	0.00e+00	679.00
IUUC-Gma-043860	Glycine max	37.04	2.00e-162	566.00
IUUC-Ggo-045334	Gorilla gorilla	86.81	0.00e+00	1542.00
IUUC-Hsa-046996	Homo sapiens	86.71	0.00e+00	1541.00
IUUC-Hvu-047381	Hordeum vulgare	32.40	7.00e-84	304.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	86.29	0.00e+00	1562.00
IUUC-Kpa-049185	Komagataella pastoris	34.85	4.00e-152	532.00
IUUC-Lch-050098	Latimeria chalumnae	65.59	0.00e+00	1126.00
IUUC-Lpe-050710	Leersia perrieri	36.20	1.00e-159	556.00
IUUC-Loc-052745	Lepisosteus oculatus	66.74	0.00e+00	1173.00
IUUC-Lma-053104	Leptosphaeria maculans	37.54	4.00e-171	596.00
IUUC-Laf-054395	Loxodonta africana	85.65	0.00e+00	1552.00
IUUC-Mcc-055077	Macaca mulatta	86.81	0.00e+00	1561.00
IUUC-Meu-056418	Macropus eugenii	87.55	0.00e+00	778.00
IUUC-Mor-057031	Magnaporthe oryzae	36.44	5.00e-149	521.00
IUUC-Mpo-057420	Magnaporthe poae	36.98	8.00e-163	567.00
IUUC-Mtr-057838	Medicago truncatula	37.74	7.00e-174	604.00
IUUC-Mla-058854	Melampsora laricipopulina	36.73	2.00e-156	546.00
IUUC-Mga-060120	Meleagris gallopavo	72.80	0.00e+00	1242.00
IUUC-Mvi-060407	Microbotryum violaceum	43.81	1.00e-134	473.00
IUUC-Mmr-060635	Microcebus murinus	85.22	0.00e+00	1540.00
IUUC-Mdo-063023	Monodelphis domestica	94.40	0.00e+00	1712.00
IUUC-Mmu-064103	Mus musculus	84.40	0.00e+00	1533.00
IUUC-Mac-065569	Musa acuminata	37.54	9.00e-166	577.00
IUUC-Mpu-066462	Mustela putorius furo	86.92	0.00e+00	1592.00
IUUC-Mlu-067894	Myotis lucifugus	86.39	0.00e+00	1594.00
IUUC-Nfi-068321	Neosartorya fischeri	37.56	4.00e-174	605.00
IUUC-Ncr-068661	Neurospora crassa	36.80	3.00e-163	569.00
IUUC-Nle-069409	Nomascus leucogenys	86.71	0.00e+00	1550.00
IUUC-Opr-070445	Ochotona princeps	81.44	0.00e+00	939.00
IUUC-Ont-072339	Oreochromis niloticus	69.25	0.00e+00	1226.00
IUUC-Oan-073688	Ornithorhynchus anatinus	74.87	0.00e+00	1342.00
IUUC-Ocu-074227	Oryctolagus cuniculus	86.81	0.00e+00	1594.00
IUUC-Oba-075635	Oryza barthii	36.13	7.00e-153	534.00
IUUC-Obr-076897	Oryza brachyantha	36.61	5.00e-162	564.00
IUUC-Ogl-077555	Oryza glaberrima	36.23	2.00e-152	533.00
IUUC-Ogu-078724	Oryza glumaepatula	36.34	7.00e-154	538.00
IUUC-Oin-080030	Oryza indica	36.34	7.00e-153	534.00
IUUC-Olo-080687	Oryza longistaminata	34.21	9.00e-141	494.00
IUUC-Ome-081867	Oryza meridionalis	36.54	8.00e-154	537.00
IUUC-Oni-082559	Oryza nivara	36.34	8.00e-153	534.00
IUUC-Opu-083332	Oryza punctata	39.22	7.00e-145	508.00
IUUC-Oru-084455	Oryza rufipogon	36.34	6.00e-153	534.00
IUUC-Osa-085793	Oryza sativa	36.34	6.00e-153	534.00
IUUC-Ola-087395	Oryzias latipes	67.56	0.00e+00	1136.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.57	6.00e-153	534.00
IUUC-Oga-088574	Otolemur garnettii	87.13	0.00e+00	1595.00
IUUC-Oar-089453	Ovis aries	85.68	0.00e+00	1597.00
IUUC-Ptr-090694	Pan troglodytes	86.60	0.00e+00	1535.00
IUUC-Pan-092420	Papio anubis	86.71	0.00e+00	1563.00
IUUC-Psi-093683	Pelodiscus sinensis	82.14	0.00e+00	1493.00
IUUC-Pma-094197	Petromyzon marinus	57.46	8.00e-72	263.00
IUUC-Pno-094783	Phaeosphaeria nodorum	36.94	2.00e-166	579.00
IUUC-Ppa-095208	Physcomitrella patens	38.94	2.00e-169	589.00
IUUC-Pfo-096299	Poecilia formosa	68.35	0.00e+00	1238.00
IUUC-Pab-098706	Pongo abelii	86.81	0.00e+00	1545.00
IUUC-Pop-099275	Populus trichocarpa	38.10	2.00e-167	583.00
IUUC-Pca-100796	Procavia capensis	71.67	0.00e+00	1163.00
IUUC-Ppe-101861	Prunus persica	39.50	3.00e-173	602.00
IUUC-Pva-103241	Pteropus vampyrus	81.93	0.00e+00	1425.00
IUUC-Pgr-103432	Puccinia graminis	36.98	3.00e-156	545.00
IUUC-Ptt-103742	Puccinia triticina	41.26	4.00e-106	379.00
IUUC-Pte-104069	Pyrenophora teres	37.34	2.00e-162	566.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.55	1.00e-168	587.00
IUUC-Rno-105219	Rattus norvegicus	83.98	0.00e+00	1489.00
IUUC-Sce-106271	Saccharomyces cerevisiae	36.42	4.00e-156	545.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	38.27	5.00e-162	564.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.41	4.00e-165	575.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	36.22	7.00e-163	567.00
IUUC-Smo-108974	Selaginella moellendorffii	38.23	1.00e-163	570.00
IUUC-Sit-110000	Setaria italica	37.95	8.00e-155	541.00
IUUC-Sly-111595	Solanum lycopersicum	38.16	6.00e-173	601.00
IUUC-Stu-112516	Solanum tuberosum	38.04	4.00e-171	595.00
IUUC-Sar-113195	Sorex araneus	76.77	0.00e+00	1237.00
IUUC-Sbi-114465	Sorghum bicolor	35.85	6.00e-160	558.00
IUUC-Sre-115006	Sporisorium reilianum	34.50	2.00e-149	523.00
IUUC-Ssc-115929	Sus scrofa	85.86	0.00e+00	1546.00
IUUC-Tgu-117282	Taeniopygia guttata	77.19	0.00e+00	1328.00
IUUC-Tru-118406	Takifugu rubripes	65.91	0.00e+00	1164.00
IUUC-Tsy-119170	Tarsius syrichta	86.11	0.00e+00	1568.00
IUUC-Tni-119721	Tetraodon nigroviridis	65.20	0.00e+00	1141.00
IUUC-Tca-121761	Theobroma cacao	38.58	2.00e-175	609.00
IUUC-Tre-121908	Trichoderma reesei	36.35	3.00e-162	565.00
IUUC-Tvi-122547	Trichoderma virens	37.15	9.00e-166	577.00
IUUC-Tae-125496	Triticum aestivum	36.89	4.00e-156	545.00
IUUC-Tur-126811	Triticum urartu	38.06	4.00e-156	545.00
IUUC-Tme-126987	Tuber melanosporum	38.28	4.00e-175	608.00
IUUC-Tbe-127315	Tupaia belangeri	87.92	0.00e+00	835.00
IUUC-Ttr-129165	Tursiops truncatus	79.47	0.00e+00	795.00
IUUC-Uma-129651	Ustilago maydis	34.51	3.00e-148	519.00
IUUC-Vda-129973	Verticillium dahliae	37.68	8.00e-159	554.00
IUUC-Vpa-130163	Vicugna pacos	77.16	0.00e+00	687.00
IUUC-Vvi-131402	Vitis vinifera	37.80	2.00e-172	599.00
IUUC-Xtr-132296	Xenopus tropicalis	73.44	0.00e+00	1307.00
IUUC-Xma-133028	Xiphophorus maculatus	67.92	0.00e+00	1234.00
IUUC-Yli-134484	Yarrowia lipolytica	37.22	3.00e-149	522.00
IUUC-Zma-135938	Zea mays	35.55	1.00e-158	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence