iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134484

Ensembl Protein ID

CAG81601

UniProt Accession

Q6CDF6; Q6CDF6_YARLI

Genbank Protein ID

CAG81601.1

Protein Name

YALI0C00913p

Genbank Nucleotide ID

CR382129

Gene Name

YALI0_C00913g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_C00913g	CAG81601	CAG81601

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-50	163.9	114	147
UBD/Beta-Prp	7.00e-89	296.3	27	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gH++s+tcl+f  s+t+lvsGs+D ++ +WDl +
   Q: 114  GHKSSITCLEFdaSGTRLVSGSRDSNVILWDLVE 147
           8***********877****************965 PP

UBD/Beta-Prp

   S: 101  sfspsgdklvsGshdrtirvwdletgqclee............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfd 189
           +++ s+ + v+G   +t+  wd++ g+c+++            t +  +  v +v ++ ++ ll++G +D+ +r++d ++g++++t++g h++s+++l+fd
   Q: 27   NSNSSTGRAVTGA-LETVLAWDIKAGTCVQKlsdsdlavgtgaTVATASPPVVSVLTNYFSELLAAGYTDGSIRVFDYRSGQVMTTFKG-HKSSITCLEFD 125
           5555666777775.999************************9988888888999999999****************************9.*********** PP
   S: 190  sngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvn 290
            +g++lvsgs+d+ v+lwdl ++  v +l+ h+d+v+ v+f+ +++ l+++++Dg ++iWdl+s+d++ t  +  s v++++v  ++d v+  g+e ++v+
   Q: 126  ASGTRLVSGSRDSNVILWDLVEEVGVSRLRSHRDQVTGVKFL-DEKKLITCAKDGLVKIWDLESRDCIETRVG-GSEVWAMDV--YSDTVMTVGRE-KEVK 221
           *********************9999*****************.9999**********************9877.56*******..99999999988.79** PP
   S: 291  iwklk 295
           +w+++
   Q: 222  VWQVD 226
           **986 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MVKSYNRFEA EAVFGVVSSS NALWLKNSNS STGRAVTGAL ETVLAWDIKA GTCVQKLSDS 60
DLAVGTGATV ATASPPVVSV LTNYFSELLA AGYTDGSIRV FDYRSGQVMT TFKGHKSSIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTAAAAT CATACAACCG ATTCGAGGCC GAGGCCGTGT TTGGCGTCGT GTCGTCGAGC 60
AATGCGCTGT GGCTGAAAAA TTCAAATTCC AGTACTGGAC GGGCCGTGAC AGGGGCTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

yli:YALI0C00913g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.31	2.00e-136	478.00
IUUC-Aml-001245	Ailuropoda melanoleuca	37.94	1.00e-154	538.00
IUUC-Atr-002700	Amborella trichopoda	36.47	5.00e-154	536.00
IUUC-Apl-004164	Anas platyrhynchos	39.71	8.00e-124	435.00
IUUC-Aca-004765	Anolis carolinensis	38.16	1.00e-153	535.00
IUUC-Aly-006503	Arabidopsis lyrata	35.61	1.00e-150	525.00
IUUC-Ath-006848	Arabidopsis thaliana	35.10	2.00e-152	530.00
IUUC-Ago-007909	Ashbya gossypii	45.08	0.00e+00	775.00
IUUC-Acl-008238	Aspergillus clavatus	46.52	0.00e+00	822.00
IUUC-Afl-008544	Aspergillus flavus	45.19	0.00e+00	802.00
IUUC-Afu-008868	Aspergillus fumigatus	45.05	0.00e+00	809.00
IUUC-Ani-009367	Aspergillus nidulans	46.08	0.00e+00	793.00
IUUC-Ang-009732	Aspergillus niger	46.23	0.00e+00	828.00
IUUC-Aor-010140	Aspergillus oryzae	45.51	0.00e+00	808.00
IUUC-Ate-010572	Aspergillus terreus	45.71	0.00e+00	816.00
IUUC-Ame-010956	Astyanax mexicanus	38.15	2.00e-157	547.00
IUUC-Bgr-012296	Blumeria graminis	43.71	0.00e+00	771.00
IUUC-Bta-012716	Bos taurus	38.16	4.00e-158	550.00
IUUC-Bci-013699	Botrytis cinerea	44.87	0.00e+00	757.00
IUUC-Bdi-014525	Brachypodium distachyon	37.83	6.00e-149	519.00
IUUC-Bol-015117	Brassica oleracea	37.46	3.00e-153	533.00
IUUC-Bra-016869	Brassica rapa	38.15	1.00e-152	531.00
IUUC-Cel-018570	Caenorhabditis elegans	27.66	1.00e-93	335.00
IUUC-Cja-019425	Callithrix jacchus	37.62	1.00e-159	554.00
IUUC-Cfa-020787	Canis familiaris	37.94	3.00e-152	530.00
IUUC-Cpo-021729	Cavia porcellus	40.86	7.00e-127	445.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	38.73	3.00e-92	330.00
IUUC-Csa-024098	Chlorocebus sabaeus	38.80	2.00e-164	571.00
IUUC-Cho-024495	Choloepus hoffmanni	40.00	9.00e-90	322.00
IUUC-Cin-025245	Ciona intestinalis	34.81	1.00e-89	321.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	45.89	0.00e+00	764.00
IUUC-Cne-026835	Cryptococcus neoformans	49.55	1.00e-141	494.00
IUUC-Cme-027162	Cyanidioschyzon merolae	30.36	3.00e-33	135.00
IUUC-Dre-027874	Danio rerio	38.09	2.00e-159	554.00
IUUC-Dno-028905	Dasypus novemcinctus	38.69	2.00e-154	537.00
IUUC-Dor-030383	Dipodomys ordii	41.21	2.00e-55	208.00
IUUC-Dse-031297	Dothistroma septosporum	42.41	0.00e+00	729.00
IUUC-Dme-031956	Drosophila melanogaster	31.65	2.00e-117	414.00
IUUC-Ete-032608	Echinops telfairi	35.77	4.00e-86	310.00
IUUC-Eca-034181	Equus caballus	38.05	7.00e-154	535.00
IUUC-Eeu-034495	Erinaceus europaeus	38.12	5.00e-149	519.00
IUUC-Fca-035994	Felis catus	39.49	3.00e-150	523.00
IUUC-Fal-036611	Ficedula albicollis	38.48	2.00e-154	537.00
IUUC-Fox-037807	Fusarium oxysporum	46.77	0.00e+00	793.00
IUUC-Fso-038090	Fusarium solani	46.52	0.00e+00	780.00
IUUC-Gmo-039018	Gadus morhua	34.30	1.00e-76	278.00
IUUC-Ggr-039748	Gaeumannomyces graminis	46.88	0.00e+00	812.00
IUUC-Gga-040707	Gallus gallus	43.20	4.00e-119	420.00
IUUC-Gac-042334	Gasterosteus aculeatus	34.43	3.00e-71	261.00
IUUC-Gma-043033	Glycine max	36.94	9.00e-153	532.00
IUUC-Ggo-045334	Gorilla gorilla	38.37	3.00e-163	566.00
IUUC-Hsa-046996	Homo sapiens	38.37	3.00e-164	570.00
IUUC-Hvu-047381	Hordeum vulgare	34.08	6.00e-77	279.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	38.16	8.00e-155	539.00
IUUC-Kpa-049185	Komagataella pastoris	43.71	0.00e+00	755.00
IUUC-Lch-050098	Latimeria chalumnae	35.90	3.00e-136	477.00
IUUC-Lpe-050710	Leersia perrieri	36.02	6.00e-142	496.00
IUUC-Loc-052745	Lepisosteus oculatus	36.53	3.00e-148	516.00
IUUC-Lma-053104	Leptosphaeria maculans	44.44	0.00e+00	774.00
IUUC-Laf-054395	Loxodonta africana	37.62	9.00e-155	538.00
IUUC-Mcc-055077	Macaca mulatta	38.69	1.00e-164	571.00
IUUC-Meu-056418	Macropus eugenii	41.18	3.00e-86	311.00
IUUC-Mor-057031	Magnaporthe oryzae	46.29	0.00e+00	730.00
IUUC-Mpo-057420	Magnaporthe poae	46.23	0.00e+00	785.00
IUUC-Mtr-057838	Medicago truncatula	37.08	2.00e-155	541.00
IUUC-Mla-058854	Melampsora laricipopulina	38.26	1.00e-160	558.00
IUUC-Mga-060120	Meleagris gallopavo	41.19	2.00e-119	421.00
IUUC-Mvi-060407	Microbotryum violaceum	45.81	8.00e-155	539.00
IUUC-Mmr-060635	Microcebus murinus	38.30	6.00e-155	539.00
IUUC-Mdo-063023	Monodelphis domestica	38.00	6.00e-155	539.00
IUUC-Mmu-064103	Mus musculus	38.48	4.00e-159	553.00
IUUC-Mac-065569	Musa acuminata	38.28	7.00e-153	532.00
IUUC-Mpu-066462	Mustela putorius furo	37.98	2.00e-155	541.00
IUUC-Mlu-067894	Myotis lucifugus	38.16	2.00e-153	534.00
IUUC-Nfi-068321	Neosartorya fischeri	45.41	0.00e+00	798.00
IUUC-Ncr-068661	Neurospora crassa	46.69	0.00e+00	786.00
IUUC-Nle-069409	Nomascus leucogenys	39.23	2.00e-165	574.00
IUUC-Opr-070445	Ochotona princeps	42.78	2.00e-117	415.00
IUUC-Ont-072339	Oreochromis niloticus	37.66	3.00e-157	547.00
IUUC-Oan-073688	Ornithorhynchus anatinus	37.54	2.00e-143	501.00
IUUC-Ocu-074227	Oryctolagus cuniculus	38.44	9.00e-156	542.00
IUUC-Oba-075635	Oryza barthii	36.40	2.00e-138	484.00
IUUC-Obr-076897	Oryza brachyantha	37.62	3.00e-152	530.00
IUUC-Ogl-077555	Oryza glaberrima	36.30	5.00e-138	483.00
IUUC-Ogu-078724	Oryza glumaepatula	36.30	5.00e-140	489.00
IUUC-Oin-080030	Oryza indica	36.51	2.00e-138	484.00
IUUC-Olo-080687	Oryza longistaminata	34.37	4.00e-127	447.00
IUUC-Ome-081867	Oryza meridionalis	36.74	9.00e-139	485.00
IUUC-Oni-082559	Oryza nivara	36.51	1.00e-138	484.00
IUUC-Opu-083332	Oryza punctata	39.12	1.00e-128	452.00
IUUC-Oru-084455	Oryza rufipogon	36.51	2.00e-138	484.00
IUUC-Osa-085793	Oryza sativa	36.51	2.00e-138	484.00
IUUC-Ola-087395	Oryzias latipes	41.95	3.00e-116	410.00
IUUC-Olu-087768	Ostreococcus lucimarinus	38.67	8.00e-103	366.00
IUUC-Oga-088574	Otolemur garnettii	38.48	7.00e-156	542.00
IUUC-Oar-089453	Ovis aries	37.65	1.00e-156	544.00
IUUC-Ptr-090694	Pan troglodytes	38.69	4.00e-164	570.00
IUUC-Pan-092420	Papio anubis	38.16	1.00e-162	564.00
IUUC-Psi-093683	Pelodiscus sinensis	38.28	7.00e-148	516.00
IUUC-Pma-094197	Petromyzon marinus	35.56	4.00e-29	119.00
IUUC-Pno-094783	Phaeosphaeria nodorum	42.98	0.00e+00	741.00
IUUC-Ppa-095208	Physcomitrella patens	36.20	7.00e-146	509.00
IUUC-Pfo-096299	Poecilia formosa	37.67	2.00e-162	564.00
IUUC-Pab-098706	Pongo abelii	38.95	4.00e-164	570.00
IUUC-Pop-099275	Populus trichocarpa	37.18	9.00e-144	502.00
IUUC-Pca-100796	Procavia capensis	32.71	2.00e-98	351.00
IUUC-Ppe-101861	Prunus persica	36.64	8.00e-150	522.00
IUUC-Pva-103241	Pteropus vampyrus	36.61	1.00e-143	501.00
IUUC-Pgr-103432	Puccinia graminis	38.02	6.00e-162	562.00
IUUC-Ptt-103742	Puccinia triticina	34.11	8.00e-141	492.00
IUUC-Pte-104069	Pyrenophora teres	43.81	0.00e+00	737.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	44.24	0.00e+00	766.00
IUUC-Rno-105219	Rattus norvegicus	38.13	1.00e-154	538.00
IUUC-Sce-106271	Saccharomyces cerevisiae	45.55	0.00e+00	774.00
IUUC-Sha-107550	Sarcophilus harrisii	37.09	2.00e-153	534.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	44.28	0.00e+00	747.00
IUUC-Spo-108239	Schizosaccharomyces pombe	42.10	0.00e+00	733.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	46.55	0.00e+00	801.00
IUUC-Smo-109477	Selaginella moellendorffii	36.79	4.00e-149	520.00
IUUC-Sit-110000	Setaria italica	37.41	1.00e-138	485.00
IUUC-Sly-111595	Solanum lycopersicum	37.73	5.00e-148	516.00
IUUC-Stu-112516	Solanum tuberosum	37.39	2.00e-145	508.00
IUUC-Sar-113195	Sorex araneus	44.03	9.00e-115	405.00
IUUC-Sbi-114465	Sorghum bicolor	37.93	5.00e-150	523.00
IUUC-Sre-115006	Sporisorium reilianum	35.76	2.00e-160	558.00
IUUC-Ssc-115929	Sus scrofa	38.05	1.00e-154	538.00
IUUC-Tgu-117282	Taeniopygia guttata	38.69	2.00e-153	534.00
IUUC-Tru-118406	Takifugu rubripes	36.83	1.00e-154	538.00
IUUC-Tsy-119170	Tarsius syrichta	38.55	3.00e-153	533.00
IUUC-Tni-119721	Tetraodon nigroviridis	36.60	2.00e-146	511.00
IUUC-Tca-121761	Theobroma cacao	37.41	4.00e-160	556.00
IUUC-Tre-121908	Trichoderma reesei	45.79	0.00e+00	755.00
IUUC-Tvi-122547	Trichoderma virens	45.53	0.00e+00	759.00
IUUC-Tae-125496	Triticum aestivum	37.91	4.00e-147	513.00
IUUC-Tur-126811	Triticum urartu	38.39	4.00e-147	513.00
IUUC-Tme-126987	Tuber melanosporum	46.35	0.00e+00	818.00
IUUC-Tbe-127315	Tupaia belangeri	45.38	6.00e-101	360.00
IUUC-Ttr-129165	Tursiops truncatus	33.48	4.00e-114	404.00
IUUC-Uma-129651	Ustilago maydis	35.61	3.00e-162	563.00
IUUC-Vda-129973	Verticillium dahliae	45.16	0.00e+00	745.00
IUUC-Vpa-130163	Vicugna pacos	33.71	8.00e-57	213.00
IUUC-Vvi-131402	Vitis vinifera	42.88	3.00e-117	414.00
IUUC-Xtr-132296	Xenopus tropicalis	42.93	5.00e-119	420.00
IUUC-Xma-133028	Xiphophorus maculatus	37.69	3.00e-163	567.00
IUUC-Zma-135938	Zea mays	36.86	4.00e-151	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence