iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099970

Ensembl Protein ID

POPTR_0001s04770.1

UniProt Accession

B9GLK0; B9GLK0_POPTR

Genbank Protein ID

EEE83944.1

Protein Name

E3 ubiquitin-protein ligase

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_750490; POPTR_0001s04770g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s04770	POPTR_0001s04770.1	POPTR_0001s04770.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	34.90	7.00e-43	171.00	IUUC-Hsa-046357
E3 activity/RING/RING	34.90	4.00e-43	172.00	IUUC-Mmu-064129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MATSAAELRG SHFRKAATPN TGNLGKQSTS NMQDLLDCPV CFTMMYPPIF QCPNGHTLCS 60
QCRARVKNSC PICRGELGNI RCLALEKIAE SIELPCMYQS AGCGDIFPYY SKPKHEENCK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAGCATAG AATTCCCGAA AATAATAGCT TGCGGAAAAT TGATTTTAAG TTAATTATGT 60
TTAACAGGAT AGACAATTGA GAAGAGATAT AGAATCTGGT TCCTTATTCA GAGATAGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s04770g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001186	Ailuropoda melanoleuca	34.90	2.00e-44	171.00
IUUC-Apl-003813	Anas platyrhynchos	34.90	2.00e-44	171.00
IUUC-Aca-005014	Anolis carolinensis	34.90	3.00e-44	171.00
IUUC-Ame-011196	Astyanax mexicanus	35.29	7.00e-45	173.00
IUUC-Bta-012887	Bos taurus	34.90	2.00e-44	171.00
IUUC-Cel-018320	Caenorhabditis elegans	31.56	1.00e-37	150.00
IUUC-Cja-019796	Callithrix jacchus	34.90	3.00e-44	171.00
IUUC-Cfa-020642	Canis familiaris	34.90	2.00e-44	172.00
IUUC-Cpo-022348	Cavia porcellus	34.90	2.00e-44	171.00
IUUC-Csa-023974	Chlorocebus sabaeus	34.90	2.00e-44	171.00
IUUC-Cho-024933	Choloepus hoffmanni	34.52	7.00e-42	163.00
IUUC-Dre-028041	Danio rerio	35.29	7.00e-45	173.00
IUUC-Dno-029764	Dasypus novemcinctus	34.90	3.00e-44	171.00
IUUC-Dor-030489	Dipodomys ordii	29.19	5.00e-21	93.20
IUUC-Ete-032423	Echinops telfairi	36.51	1.00e-43	169.00
IUUC-Eca-033536	Equus caballus	34.90	2.00e-44	171.00
IUUC-Eeu-035314	Erinaceus europaeus	36.51	1.00e-43	169.00
IUUC-Fca-035362	Felis catus	34.90	2.00e-44	172.00
IUUC-Fal-037487	Ficedula albicollis	34.90	2.00e-44	171.00
IUUC-Gmo-039091	Gadus morhua	35.50	1.00e-42	166.00
IUUC-Gga-040269	Gallus gallus	34.90	2.00e-44	171.00
IUUC-Gac-042282	Gasterosteus aculeatus	35.29	6.00e-45	173.00
IUUC-Ggo-045444	Gorilla gorilla	34.90	2.00e-44	171.00
IUUC-Hsa-046357	Homo sapiens	34.90	2.00e-44	171.00
IUUC-Itr-048046	Ictidomys tridecemlineatus	34.90	2.00e-44	171.00
IUUC-Lch-049504	Latimeria chalumnae	34.90	2.00e-44	171.00
IUUC-Loc-052191	Lepisosteus oculatus	34.90	2.00e-44	172.00
IUUC-Laf-053668	Loxodonta africana	34.90	2.00e-44	171.00
IUUC-Mcc-054640	Macaca mulatta	34.90	2.00e-44	171.00
IUUC-Meu-055922	Macropus eugenii	33.73	3.00e-40	158.00
IUUC-Mga-059503	Meleagris gallopavo	34.90	3.00e-44	171.00
IUUC-Mmr-060794	Microcebus murinus	34.90	2.00e-44	171.00
IUUC-Mdo-061971	Monodelphis domestica	34.13	2.00e-41	162.00
IUUC-Mmu-064129	Mus musculus	34.90	1.00e-44	172.00
IUUC-Mpu-066488	Mustela putorius furo	34.90	2.00e-44	171.00
IUUC-Mlu-067207	Myotis lucifugus	34.90	2.00e-44	172.00
IUUC-Nle-069706	Nomascus leucogenys	34.90	3.00e-44	171.00
IUUC-Ont-071849	Oreochromis niloticus	35.29	7.00e-45	173.00
IUUC-Ocu-074876	Oryctolagus cuniculus	34.90	3.00e-44	171.00
IUUC-Ola-086814	Oryzias latipes	35.29	6.00e-45	173.00
IUUC-Oga-088399	Otolemur garnettii	34.90	2.00e-44	171.00
IUUC-Oar-089323	Ovis aries	34.90	2.00e-44	172.00
IUUC-Ptr-090692	Pan troglodytes	34.90	3.00e-44	171.00
IUUC-Pan-092012	Papio anubis	34.90	2.00e-44	171.00
IUUC-Psi-093687	Pelodiscus sinensis	34.90	2.00e-44	172.00
IUUC-Pma-094387	Petromyzon marinus	35.04	2.00e-45	174.00
IUUC-Pfo-097134	Poecilia formosa	35.29	6.00e-45	173.00
IUUC-Pab-097555	Pongo abelii	34.90	2.00e-44	171.00
IUUC-Pca-100328	Procavia capensis	33.73	3.00e-39	154.00
IUUC-Rno-104866	Rattus norvegicus	34.90	1.00e-44	172.00
IUUC-Sha-106547	Sarcophilus harrisii	34.90	2.00e-44	171.00
IUUC-Ssc-116441	Sus scrofa	34.52	7.00e-42	163.00
IUUC-Tgu-116579	Taeniopygia guttata	34.90	2.00e-44	171.00
IUUC-Tru-118250	Takifugu rubripes	34.90	2.00e-43	168.00
IUUC-Tni-120488	Tetraodon nigroviridis	36.59	4.00e-42	164.00
IUUC-Ttr-129166	Tursiops truncatus	36.10	1.00e-41	163.00
IUUC-Vpa-130799	Vicugna pacos	30.41	4.00e-20	90.50
IUUC-Xtr-132553	Xenopus tropicalis	34.90	2.00e-44	171.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence