iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104523

Ensembl Protein ID

EDU45774

UniProt Accession

B2VXK5; B2VXK5_PYRTR

Genbank Protein ID

EDU45774.1

Protein Name

Transcription initiation factor TFIID subunit 5

Genbank Nucleotide ID

DS231616

Gene Name

PTRG_03251

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_03251	EDU45774	EDU45774

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-34	115.0	439	487
UBD/Beta-Prp	1.50e-61	207.5	383	661

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.............sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++vt++af             ++   l+s+s D+t+++W+l+t ++
   Q: 439  GHSGPVTAVAFspstanpdpngppTNsECLLSCSEDKTVRLWSLDTYTC 487
           8************9999988777533466**************988666 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.............lrslsgheaevtavkfspdgk............ilvtgseDrtikvwdls 82
           ++  + i+c++fs d++l+a+g   + i+vw+++   l              r+l gh+++vtav fsp++              l+++seD+t+++w+l+
   Q: 383  HNTYDSINCIDFSGDNQLVAAGMNESYIRVWSMDGSPLtspndtantqpssSRRLVGHSGPVTAVAFSPSTAnpdpngpptnseCLLSCSEDKTVRLWSLD 483
           566789*****************************999*******************************988899999*********************** PP
   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           t++c+++++gh++ v+++++ p+g+++++Gs+drt+r+w +++ + l+ +  ghd  v cv++hp++ ++++Gs Drtvr+W ++ g++lr +tg ht+ v
   Q: 484  TYTCLVAYRGHDNPVWDVQWGPYGHYFLTGSNDRTARLWSTDHIEPLR-IYVGHDNDVDCVTFHPNNLYIFTGSCDRTVRMWHIAGGNCLRLFTG-HTGNV 582
           ************************************************.*********************************************9.***** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
           + +s +++gk l+s+++ g ++lw l tg+  ++++gh    ++s+  s ++  lvs+++D+++r+Wd+ +    k++ 
   Q: 583  TAISCSPDGKTLASADDAGNIILWTLDTGRRKKRMRGHGkGGIWSLSWSVESSVLVSAGADKTVRVWDVLQEPSEKATD 661
           *************************************964789*************************98776666655 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MSGPPQGPGP VRAMSVGNGP PSAGLPPHSA MPPQGGPPPP GSSGPQSQQN LNQIVLEYLS 60
KKGYVRTEAM LRKESEPQTN GQPLTAQSTE AGGAKYTKAF ELLRKYTEDN LDLYRPELRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGGGC CCCCGCAAGG GCCCGGGCCT GTGAGGGCCA TGAGCGTAGG GAATGGTCCG 60
CCCAGTGCTG GCTTACCACC ACACAGCGCG ATGCCTCCGC AAGGCGGTCC ACCACCACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000124--C:SAGA complex
GO:0046695--C:SLIK (SAGA-like) complex
GO:0005669--C:transcription factor TFIID complex
GO:0003682--F:chromatin binding
GO:0003743--F:translation initiation factor activity
GO:0016573--P:histone acetylation
GO:0006366--P:transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	37.39	4.00e-59	221.00
IUUC-Aml-001607	Ailuropoda melanoleuca	37.74	6.00e-79	286.00
IUUC-Atr-003136	Amborella trichopoda	37.22	4.00e-73	267.00
IUUC-Apl-004193	Anas platyrhynchos	37.68	7.00e-79	286.00
IUUC-Aca-004522	Anolis carolinensis	30.11	3.00e-89	321.00
IUUC-Aly-006476	Arabidopsis lyrata	32.35	2.00e-87	315.00
IUUC-Ath-006587	Arabidopsis thaliana	31.23	4.00e-87	313.00
IUUC-Ago-007736	Ashbya gossypii	48.36	6.00e-112	396.00
IUUC-Acl-008092	Aspergillus clavatus	56.89	0.00e+00	801.00
IUUC-Afl-008659	Aspergillus flavus	58.14	0.00e+00	806.00
IUUC-Afu-008902	Aspergillus fumigatus	56.52	0.00e+00	781.00
IUUC-Ani-009462	Aspergillus nidulans	55.67	0.00e+00	684.00
IUUC-Aor-010083	Aspergillus oryzae	57.99	0.00e+00	805.00
IUUC-Ate-010271	Aspergillus terreus	57.64	0.00e+00	788.00
IUUC-Ame-010721	Astyanax mexicanus	36.96	2.00e-77	281.00
IUUC-Bgr-012257	Blumeria graminis	47.70	1.00e-173	601.00
IUUC-Bta-013539	Bos taurus	37.74	6.00e-79	286.00
IUUC-Bci-013737	Botrytis cinerea	49.93	0.00e+00	693.00
IUUC-Bdi-015041	Brachypodium distachyon	40.17	1.00e-66	245.00
IUUC-Bol-016198	Brassica oleracea	31.15	1.00e-87	315.00
IUUC-Bra-017660	Brassica rapa	30.58	3.00e-87	314.00
IUUC-Cel-018451	Caenorhabditis elegans	25.11	2.00e-49	188.00
IUUC-Cja-018881	Callithrix jacchus	37.50	2.00e-78	285.00
IUUC-Cfa-020056	Canis familiaris	37.74	6.00e-79	286.00
IUUC-Cpo-021454	Cavia porcellus	30.40	2.00e-92	332.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	33.87	5.00e-43	167.00
IUUC-Csa-023045	Chlorocebus sabaeus	37.50	3.00e-78	284.00
IUUC-Cho-024284	Choloepus hoffmanni	41.84	2.00e-63	234.00
IUUC-Cin-025457	Ciona intestinalis	39.52	6.00e-57	212.00
IUUC-Csv-025882	Ciona savignyi	34.28	2.00e-63	235.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	46.23	6.00e-180	622.00
IUUC-Cne-026876	Cryptococcus neoformans	34.90	3.00e-94	337.00
IUUC-Cme-027302	Cyanidioschyzon merolae	37.05	1.00e-60	226.00
IUUC-Dre-027980	Danio rerio	37.92	7.00e-80	290.00
IUUC-Dno-028863	Dasypus novemcinctus	37.50	3.00e-78	284.00
IUUC-Dor-030561	Dipodomys ordii	37.50	1.00e-78	286.00
IUUC-Dse-031547	Dothistroma septosporum	53.43	0.00e+00	727.00
IUUC-Dme-031917	Drosophila melanogaster	33.25	5.00e-64	237.00
IUUC-Ete-032712	Echinops telfairi	37.43	8.00e-61	226.00
IUUC-Eca-033927	Equus caballus	31.48	8.00e-93	333.00
IUUC-Eeu-034449	Erinaceus europaeus	38.75	3.00e-72	265.00
IUUC-Fca-036325	Felis catus	37.74	1.00e-78	286.00
IUUC-Fal-036604	Ficedula albicollis	37.68	2.00e-78	285.00
IUUC-Fox-038049	Fusarium oxysporum	43.97	6.00e-152	529.00
IUUC-Fso-038302	Fusarium solani	44.16	1.00e-159	555.00
IUUC-Gmo-038832	Gadus morhua	37.44	1.00e-79	288.00
IUUC-Ggr-039878	Gaeumannomyces graminis	47.48	5.00e-163	566.00
IUUC-Gga-041147	Gallus gallus	31.10	2.00e-91	328.00
IUUC-Gac-041373	Gasterosteus aculeatus	36.71	4.00e-76	277.00
IUUC-Gma-043230	Glycine max	40.78	2.00e-73	268.00
IUUC-Ggo-044568	Gorilla gorilla	37.70	2.00e-60	225.00
IUUC-Hsa-045971	Homo sapiens	37.50	2.00e-78	285.00
IUUC-Hvu-047695	Hordeum vulgare	40.22	1.00e-67	248.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	37.50	1.00e-78	286.00
IUUC-Kpa-049402	Komagataella pastoris	39.66	2.00e-139	488.00
IUUC-Lch-049526	Latimeria chalumnae	35.58	4.00e-70	257.00
IUUC-Lpe-050793	Leersia perrieri	29.01	1.00e-69	255.00
IUUC-Loc-052882	Lepisosteus oculatus	37.20	4.00e-79	287.00
IUUC-Lma-053212	Leptosphaeria maculans	83.56	0.00e+00	1141.00
IUUC-Laf-053859	Loxodonta africana	37.74	7.00e-79	286.00
IUUC-Mcc-054957	Macaca mulatta	37.50	4.00e-78	283.00
IUUC-Meu-056182	Macropus eugenii	37.70	3.00e-60	224.00
IUUC-Mor-057024	Magnaporthe oryzae	47.86	7.00e-161	559.00
IUUC-Mpo-057520	Magnaporthe poae	48.08	8.00e-154	535.00
IUUC-Mtr-058754	Medicago truncatula	32.20	3.00e-93	334.00
IUUC-Mla-058881	Melampsora laricipopulina	35.45	1.00e-78	286.00
IUUC-Mga-059776	Meleagris gallopavo	30.55	9.00e-92	329.00
IUUC-Mvi-060208	Microbotryum violaceum	45.13	2.00e-89	321.00
IUUC-Mmr-061783	Microcebus murinus	37.50	4.00e-78	283.00
IUUC-Mdo-062856	Monodelphis domestica	37.50	3.00e-78	285.00
IUUC-Mmu-064218	Mus musculus	37.50	2.00e-78	285.00
IUUC-Mac-064886	Musa acuminata	42.68	8.00e-57	213.00
IUUC-Mpu-065735	Mustela putorius furo	37.74	7.00e-79	286.00
IUUC-Mlu-067544	Myotis lucifugus	37.65	3.00e-77	281.00
IUUC-Nfi-068502	Neosartorya fischeri	56.81	0.00e+00	784.00
IUUC-Ncr-068891	Neurospora crassa	48.86	5.00e-165	572.00
IUUC-Nle-069389	Nomascus leucogenys	37.50	1.00e-78	286.00
IUUC-Opr-071042	Ochotona princeps	36.27	2.00e-70	258.00
IUUC-Ont-071455	Oreochromis niloticus	37.92	2.00e-80	291.00
IUUC-Oan-073181	Ornithorhynchus anatinus	30.16	3.00e-89	320.00
IUUC-Ocu-073758	Oryctolagus cuniculus	31.33	2.00e-92	331.00
IUUC-Oba-075739	Oryza barthii	38.66	5.00e-60	223.00
IUUC-Obr-076111	Oryza brachyantha	41.44	2.00e-73	268.00
IUUC-Ogl-077914	Oryza glaberrima	37.50	2.00e-61	228.00
IUUC-Ogu-078057	Oryza glumaepatula	41.01	9.00e-53	199.00
IUUC-Oin-079473	Oryza indica	38.76	3.00e-64	238.00
IUUC-Olo-080557	Oryza longistaminata	40.97	3.00e-59	220.00
IUUC-Ome-081831	Oryza meridionalis	41.01	8.00e-53	199.00
IUUC-Oni-082441	Oryza nivara	36.68	5.00e-53	200.00
IUUC-Opu-083239	Oryza punctata	41.37	2.00e-53	201.00
IUUC-Oru-085131	Oryza rufipogon	36.68	8.00e-53	199.00
IUUC-Osa-086189	Oryza sativa	38.76	3.00e-64	238.00
IUUC-Ola-086574	Oryzias latipes	37.86	4.00e-80	290.00
IUUC-Olu-087616	Ostreococcus lucimarinus	38.89	1.00e-67	248.00
IUUC-Oga-088827	Otolemur garnettii	37.50	2.00e-78	285.00
IUUC-Oar-089648	Ovis aries	37.74	6.00e-79	286.00
IUUC-Ptr-091195	Pan troglodytes	37.50	1.00e-78	285.00
IUUC-Pan-091978	Papio anubis	37.50	1.00e-78	285.00
IUUC-Psi-093598	Pelodiscus sinensis	30.63	3.00e-84	303.00
IUUC-Pma-094593	Petromyzon marinus	37.91	5.00e-50	190.00
IUUC-Pno-094823	Phaeosphaeria nodorum	85.89	0.00e+00	1137.00
IUUC-Ppa-095455	Physcomitrella patens	30.87	9.00e-89	319.00
IUUC-Pfo-097120	Poecilia formosa	38.65	2.00e-80	291.00
IUUC-Pab-098771	Pongo abelii	37.50	1.00e-78	286.00
IUUC-Pop-099134	Populus trichocarpa	39.79	5.00e-74	270.00
IUUC-Pca-100727	Procavia capensis	37.16	7.00e-60	223.00
IUUC-Ppe-101686	Prunus persica	31.39	3.00e-89	321.00
IUUC-Pva-102414	Pteropus vampyrus	32.93	3.00e-58	218.00
IUUC-Pgr-103603	Puccinia graminis	31.15	1.00e-85	309.00
IUUC-Ptt-103995	Puccinia triticina	31.12	6.00e-72	264.00
IUUC-Pte-104359	Pyrenophora teres	98.35	0.00e+00	1358.00
IUUC-Rno-105064	Rattus norvegicus	37.50	1.00e-78	286.00
IUUC-Sce-106186	Saccharomyces cerevisiae	35.96	2.00e-130	457.00
IUUC-Sha-106582	Sarcophilus harrisii	30.61	1.00e-91	328.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	39.47	4.00e-138	483.00
IUUC-Spo-108142	Schizosaccharomyces pombe	40.27	1.00e-140	491.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	50.29	0.00e+00	665.00
IUUC-Smo-109097	Selaginella moellendorffii	31.89	2.00e-89	321.00
IUUC-Sit-109804	Setaria italica	38.67	4.00e-68	251.00
IUUC-Sly-111693	Solanum lycopersicum	30.80	2.00e-88	318.00
IUUC-Sar-113381	Sorex araneus	36.65	1.00e-64	238.00
IUUC-Sbi-114849	Sorghum bicolor	38.72	7.00e-66	243.00
IUUC-Sre-114945	Sporisorium reilianum	37.63	3.00e-78	285.00
IUUC-Ssc-115582	Sus scrofa	36.52	1.00e-73	269.00
IUUC-Tgu-116899	Taeniopygia guttata	37.44	1.00e-78	285.00
IUUC-Tru-118011	Takifugu rubripes	37.92	2.00e-77	281.00
IUUC-Tsy-119622	Tarsius syrichta	29.01	2.00e-33	135.00
IUUC-Tni-120598	Tetraodon nigroviridis	37.05	2.00e-76	278.00
IUUC-Tca-121247	Theobroma cacao	39.12	3.00e-73	267.00
IUUC-Tre-121949	Trichoderma reesei	46.55	4.00e-161	559.00
IUUC-Tvi-122626	Trichoderma virens	45.05	8.00e-171	592.00
IUUC-Tae-123335	Triticum aestivum	39.94	3.00e-69	254.00
IUUC-Tur-126005	Triticum urartu	36.64	9.00e-59	219.00
IUUC-Tme-126904	Tuber melanosporum	43.63	6.00e-154	536.00
IUUC-Tbe-127254	Tupaia belangeri	32.21	1.00e-56	212.00
IUUC-Ttr-128544	Tursiops truncatus	37.74	5.00e-79	287.00
IUUC-Uma-129379	Ustilago maydis	38.38	7.00e-79	287.00
IUUC-Vda-129761	Verticillium dahliae	44.48	2.00e-153	534.00
IUUC-Vpa-130485	Vicugna pacos	37.74	1.00e-78	286.00
IUUC-Vvi-131171	Vitis vinifera	31.34	3.00e-93	334.00
IUUC-Xtr-132762	Xenopus tropicalis	27.66	9.00e-72	263.00
IUUC-Xma-133583	Xiphophorus maculatus	38.41	2.00e-80	291.00
IUUC-Yli-134446	Yarrowia lipolytica	39.01	2.00e-142	497.00
IUUC-Zma-135722	Zea mays	39.55	9.00e-68	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence