iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126650

Ensembl Protein ID

TRIUR3_12607-P1

UniProt Accession

M8AFM1; M8AFM1_TRIUA

Genbank Protein ID

EMS59459.1

Protein Name

Periodic tryptophan protein 2

Genbank Nucleotide ID

KD121106

Gene Name

TRIUR3_12607

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_12607	TRIUR3_12607-T1	TRIUR3_12607-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-31	107.3	308	335
UBD/Beta-Prp	2.10e-53	182.2	266	517

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDl 30
           +v+c+a+ +d  l+++G+dD+++kvW  
   Q: 308  DVNCIAYsPDsQLIATGADDNKVKVWTA 335
           79******999***************65 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           it   f   +++l+ g++  g + vw++++++++ + +gh   v+++ +spd+++++tg++D+ +kvw   tg c++t+++h++ v++++f+++
   Q: 266  ITTAIFNSLGNWLVFGCAKlGQLLVWEWRSETYILKQQGHYFDVNCIAYSPDSQLIATGADDNKVKVWTAATGFCFITFSEHTNAVTAVHFMAN 359
           56677888899***999876899*********************************************************************** PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           +++l+s+s d tir wdl  +  ++++ ++  +   +++ +++g ++ +G+lD++ + +W++ktg+ll+ l+g h+++v+ l f++ +  l+s 
   Q: 360  NHSLLSASLDGTIRAWDLFRYRNFKTFTTPSPRQFVSLTADQSGEVICAGTLDSFeIYVWSMKTGRLLDVLSG-HQGPVHGLMFSPISAILASS 452
           *************************99999999999*****************965****************9.******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           s d+tv+lwd+ +++  ++   h+  v+ ++  p++  +++ + Dg i++Wd   g l+ t++++
   Q: 453  SWDKTVRLWDVFESKGAVETFQHSHDVLTLAYRPDGRQIACSTLDGLINFWDPFDGLLMYTIEGR 517
           ************9999999999*****************************97766666666665 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MNYRFQNLLG APYRGGDAVL AGGSPVLLSA AAPSAIRFSP DGQLIAVAVG KLVQIWRSPS 60
FRKEFFPFHL LRTFPGFAAG VTSFDWSPDS ASLLVACKDL TARILPVKRG TGNKPFLFLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTACC GCTTCCAGAA CCTCCTGGGC GCGCCGTACC GCGGCGGCGA CGCCGTCCTC 60
GCGGGGGGCT CCCCCGTGCT CCTCTCCGCC GTGGGGNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0009553--P:embryo sac development
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	40.75	0.00e+00	628.00
IUUC-Atr-003033	Amborella trichopoda	64.70	0.00e+00	1056.00
IUUC-Apl-003219	Anas platyrhynchos	41.30	0.00e+00	652.00
IUUC-Aca-004950	Anolis carolinensis	40.94	0.00e+00	644.00
IUUC-Aly-006213	Arabidopsis lyrata	62.63	0.00e+00	1082.00
IUUC-Ath-006593	Arabidopsis thaliana	66.46	0.00e+00	1068.00
IUUC-Ago-007916	Ashbya gossypii	43.08	0.00e+00	635.00
IUUC-Acl-008225	Aspergillus clavatus	43.32	0.00e+00	660.00
IUUC-Afl-008390	Aspergillus flavus	44.14	0.00e+00	677.00
IUUC-Afu-009039	Aspergillus fumigatus	44.32	0.00e+00	672.00
IUUC-Ani-009228	Aspergillus nidulans	41.05	6.00e-161	560.00
IUUC-Ang-009663	Aspergillus niger	42.70	0.00e+00	637.00
IUUC-Aor-009923	Aspergillus oryzae	44.14	0.00e+00	677.00
IUUC-Ate-010264	Aspergillus terreus	44.07	0.00e+00	670.00
IUUC-Ame-010790	Astyanax mexicanus	32.08	1.00e-44	172.00
IUUC-Bgr-012066	Blumeria graminis	42.17	0.00e+00	648.00
IUUC-Bta-012399	Bos taurus	41.06	9.00e-177	613.00
IUUC-Bci-013757	Botrytis cinerea	44.05	0.00e+00	638.00
IUUC-Bdi-015028	Brachypodium distachyon	92.50	0.00e+00	1437.00
IUUC-Bol-016040	Brassica oleracea	67.73	0.00e+00	1088.00
IUUC-Bra-017096	Brassica rapa	67.35	0.00e+00	1046.00
IUUC-Cel-018690	Caenorhabditis elegans	32.50	1.00e-121	430.00
IUUC-Cja-019229	Callithrix jacchus	41.68	0.00e+00	634.00
IUUC-Cfa-020504	Canis familiaris	40.97	1.00e-180	625.00
IUUC-Cpo-021574	Cavia porcellus	41.91	0.00e+00	645.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	51.81	0.00e+00	649.00
IUUC-Csa-023436	Chlorocebus sabaeus	41.70	2.00e-178	618.00
IUUC-Cin-025397	Ciona intestinalis	40.81	5.00e-139	487.00
IUUC-Csv-026194	Ciona savignyi	37.62	4.00e-154	538.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	42.15	1.00e-178	619.00
IUUC-Cne-027031	Cryptococcus neoformans	44.19	0.00e+00	695.00
IUUC-Cme-027276	Cyanidioschyzon merolae	29.27	2.00e-87	316.00
IUUC-Dre-027514	Danio rerio	41.15	2.00e-179	622.00
IUUC-Dno-029191	Dasypus novemcinctus	42.48	0.00e+00	632.00
IUUC-Dor-030149	Dipodomys ordii	40.89	0.00e+00	630.00
IUUC-Dse-031260	Dothistroma septosporum	45.50	3.00e-144	504.00
IUUC-Dme-032043	Drosophila melanogaster	37.56	4.00e-153	534.00
IUUC-Ete-033102	Echinops telfairi	44.83	1.00e-151	528.00
IUUC-Eca-033223	Equus caballus	40.91	0.00e+00	631.00
IUUC-Fca-035795	Felis catus	38.19	3.00e-165	574.00
IUUC-Fal-036830	Ficedula albicollis	41.85	0.00e+00	636.00
IUUC-Fox-037835	Fusarium oxysporum	41.86	7.00e-176	610.00
IUUC-Fso-038324	Fusarium solani	42.49	0.00e+00	627.00
IUUC-Gmo-039355	Gadus morhua	41.12	0.00e+00	629.00
IUUC-Ggr-039840	Gaeumannomyces graminis	41.75	9.00e-167	579.00
IUUC-Gga-040907	Gallus gallus	48.29	5.00e-156	543.00
IUUC-Gac-042624	Gasterosteus aculeatus	40.87	9.00e-174	603.00
IUUC-Gma-043034	Glycine max	71.04	0.00e+00	1193.00
IUUC-Hsa-046145	Homo sapiens	41.57	0.00e+00	639.00
IUUC-Hvu-047416	Hordeum vulgare	97.21	0.00e+00	1491.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	41.98	0.00e+00	640.00
IUUC-Kpa-049150	Komagataella pastoris	40.40	7.00e-166	577.00
IUUC-Lch-049460	Latimeria chalumnae	41.27	2.00e-166	578.00
IUUC-Lpe-050840	Leersia perrieri	88.78	0.00e+00	1401.00
IUUC-Loc-052733	Lepisosteus oculatus	41.08	0.00e+00	642.00
IUUC-Lma-053277	Leptosphaeria maculans	43.67	0.00e+00	655.00
IUUC-Laf-054294	Loxodonta africana	41.66	1.00e-177	615.00
IUUC-Mcc-054624	Macaca mulatta	41.57	0.00e+00	638.00
IUUC-Meu-056665	Macropus eugenii	35.77	5.00e-105	374.00
IUUC-Mor-057288	Magnaporthe oryzae	42.03	2.00e-176	612.00
IUUC-Mpo-057594	Magnaporthe poae	41.83	4.00e-168	584.00
IUUC-Mtr-058700	Medicago truncatula	68.37	0.00e+00	1224.00
IUUC-Mla-058846	Melampsora laricipopulina	43.62	0.00e+00	645.00
IUUC-Mga-059207	Meleagris gallopavo	37.24	3.00e-155	541.00
IUUC-Mvi-060327	Microbotryum violaceum	46.03	0.00e+00	719.00
IUUC-Mmr-061264	Microcebus murinus	41.58	0.00e+00	631.00
IUUC-Mdo-062327	Monodelphis domestica	40.72	2.00e-176	612.00
IUUC-Mmu-063542	Mus musculus	40.15	2.00e-176	611.00
IUUC-Mac-065142	Musa acuminata	73.92	0.00e+00	1194.00
IUUC-Mpu-066098	Mustela putorius furo	40.92	4.00e-177	613.00
IUUC-Mlu-067056	Myotis lucifugus	36.88	9.00e-146	509.00
IUUC-Nfi-068323	Neosartorya fischeri	44.19	0.00e+00	673.00
IUUC-Ncr-068925	Neurospora crassa	41.65	0.00e+00	635.00
IUUC-Nle-068970	Nomascus leucogenys	42.11	0.00e+00	639.00
IUUC-Opr-070966	Ochotona princeps	52.22	1.00e-104	372.00
IUUC-Ont-071252	Oreochromis niloticus	40.77	5.00e-178	617.00
IUUC-Oan-072737	Ornithorhynchus anatinus	40.33	1.00e-172	599.00
IUUC-Oba-075794	Oryza barthii	88.54	0.00e+00	1400.00
IUUC-Obr-076617	Oryza brachyantha	89.42	0.00e+00	1443.00
IUUC-Ogl-077022	Oryza glaberrima	89.67	0.00e+00	1448.00
IUUC-Ogu-078757	Oryza glumaepatula	72.11	0.00e+00	1107.00
IUUC-Oin-079813	Oryza indica	89.04	0.00e+00	1447.00
IUUC-Olo-080265	Oryza longistaminata	89.42	0.00e+00	1442.00
IUUC-Ome-081494	Oryza meridionalis	89.67	0.00e+00	1456.00
IUUC-Oni-082639	Oryza nivara	72.24	0.00e+00	1108.00
IUUC-Opu-084005	Oryza punctata	89.92	0.00e+00	1460.00
IUUC-Oru-084883	Oryza rufipogon	71.73	0.00e+00	1101.00
IUUC-Osa-086158	Oryza sativa	89.04	0.00e+00	1451.00
IUUC-Ola-086822	Oryzias latipes	41.54	2.00e-178	619.00
IUUC-Olu-087741	Ostreococcus lucimarinus	32.80	6.00e-21	92.00
IUUC-Oga-088887	Otolemur garnettii	40.74	5.00e-178	617.00
IUUC-Oar-090110	Ovis aries	41.08	3.00e-173	601.00
IUUC-Pan-092808	Papio anubis	42.16	0.00e+00	646.00
IUUC-Psi-093954	Pelodiscus sinensis	41.83	0.00e+00	655.00
IUUC-Pno-094922	Phaeosphaeria nodorum	43.82	0.00e+00	669.00
IUUC-Ppa-095678	Physcomitrella patens	57.95	0.00e+00	852.00
IUUC-Pfo-097175	Poecilia formosa	41.78	0.00e+00	632.00
IUUC-Pab-098155	Pongo abelii	41.98	0.00e+00	644.00
IUUC-Pop-099635	Populus trichocarpa	73.68	0.00e+00	1174.00
IUUC-Pca-100947	Procavia capensis	38.49	4.00e-167	581.00
IUUC-Ppe-101552	Prunus persica	67.71	0.00e+00	1223.00
IUUC-Pva-102744	Pteropus vampyrus	39.01	1.00e-156	546.00
IUUC-Pgr-103389	Puccinia graminis	42.71	0.00e+00	628.00
IUUC-Ptt-103953	Puccinia triticina	36.51	3.00e-137	481.00
IUUC-Pte-104079	Pyrenophora teres	43.72	0.00e+00	662.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	43.87	0.00e+00	661.00
IUUC-Rno-105502	Rattus norvegicus	40.36	0.00e+00	633.00
IUUC-Sce-106390	Saccharomyces cerevisiae	43.31	0.00e+00	662.00
IUUC-Sha-107264	Sarcophilus harrisii	40.65	7.00e-88	316.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	42.60	0.00e+00	665.00
IUUC-Spo-108348	Schizosaccharomyces pombe	42.44	0.00e+00	645.00
IUUC-Smo-108982	Selaginella moellendorffii	58.14	0.00e+00	973.00
IUUC-Sit-110304	Setaria italica	89.87	0.00e+00	1490.00
IUUC-Sly-111620	Solanum lycopersicum	78.02	0.00e+00	949.00
IUUC-Stu-112877	Solanum tuberosum	72.73	0.00e+00	1221.00
IUUC-Sbi-114702	Sorghum bicolor	90.38	0.00e+00	1467.00
IUUC-Sre-115129	Sporisorium reilianum	44.30	0.00e+00	666.00
IUUC-Ssc-115931	Sus scrofa	42.97	5.00e-92	330.00
IUUC-Tgu-116787	Taeniopygia guttata	42.23	0.00e+00	640.00
IUUC-Tru-118218	Takifugu rubripes	40.73	0.00e+00	630.00
IUUC-Tsy-119401	Tarsius syrichta	45.73	1.00e-121	430.00
IUUC-Tni-120046	Tetraodon nigroviridis	41.08	4.00e-172	597.00
IUUC-Tca-121685	Theobroma cacao	66.29	0.00e+00	1189.00
IUUC-Tre-122154	Trichoderma reesei	42.82	0.00e+00	650.00
IUUC-Tvi-122451	Trichoderma virens	42.26	0.00e+00	645.00
IUUC-Tae-125397	Triticum aestivum	99.18	0.00e+00	928.00
IUUC-Tme-127005	Tuber melanosporum	44.76	0.00e+00	670.00
IUUC-Tbe-128102	Tupaia belangeri	41.68	3.00e-119	422.00
IUUC-Ttr-128259	Tursiops truncatus	40.86	1.00e-175	609.00
IUUC-Uma-129511	Ustilago maydis	44.96	0.00e+00	670.00
IUUC-Vda-129833	Verticillium dahliae	38.65	2.00e-157	548.00
IUUC-Vvi-131572	Vitis vinifera	70.96	0.00e+00	1172.00
IUUC-Xtr-131776	Xenopus tropicalis	37.11	5.00e-63	234.00
IUUC-Xma-133887	Xiphophorus maculatus	41.29	2.00e-176	612.00
IUUC-Yli-134427	Yarrowia lipolytica	40.86	0.00e+00	634.00
IUUC-Zma-135980	Zea mays	88.38	0.00e+00	1396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence