iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003447

Ensembl Protein ID

ENSAPLP00000009526.1

UniProt Accession

U3IQK3; U3IQK3_ANAPL

Genbank Protein ID

ENSAPLP00000009526

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01045269

Gene Name

SNRNP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000009767.1	ENSAPLT00000010221.1	ENSAPLP00000009526.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-43	143.1	80	114
UBD/Beta-Prp	1.70e-59	201.2	2	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 80   GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 114
           8*******9659955588999***********886 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           c kf+p+++ la+++ d+ i +w+v   ++   ++l+gh+++v  + ++ dg++l ++s+D+t+ vwd +tg+ v  lkgh++ v s+ 
   Q: 2    CCKFHPGGNTLASAGFDRLILLWNVYG-DCdnYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 89
           789*********************997.55569******************************************************** PP
   S: 102  fspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfd 189
             + g + + +Gs+d t+++wd++++  ++ t++ ++  v  v+++++++ ++sG+ D+ +++Wdl+++kl +t++g h dsv+ ls++
   Q: 90   PARRGpQLVCTGSDDGTVKLWDIRKKAAVQ-TFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG-HADSVTGLSLS 175
           ***9978888*******************9.554.5557999**********************************9.*********** PP
   S: 190  sngkelvsgsldgtvklwdlq....tgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisv 270
           s+g +l+s ++d+tv++wd++    +++cv++++g      +n ++   sp++  ++ gs+D+ +++Wd++s+ +l +l +h+ sv   
   Q: 176  SEGSYLLSNAMDNTVRIWDVRpfapKERCVKIFQGNVhnfeKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNEL 264
           **********************************9663454555566666*************************************** PP
   S: 271  avlsfgdnvlvlgsedskv 289
           a+ ++++++++++s+d+++
   Q: 265  AF-HPEEPIILSASSDKRL 282
           **.************9875 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

XCCKFHPGGN TLASAGFDRL ILLWNVYGDC DNYATLKGHS GAVMELHYNT DGSMLFSAST 60
DKTVAVWDSE TGERVKRLKG HTSFVNSCYP ARRGPQLVCT GSDDGTVKLW DIRKKAAVQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNCTGCTGCA AGTTCCACCC CGGCGGCAAC ACCCTGGCCT CCGCCGGCTT CGACAGGCTC 60
ATCCGTGAGT ACGGCAGGGC CGGGGTGCGG TGCTCAGCCC GGGGCTCCCA GGGACAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	58.39	5.00e-110	390.00
IUUC-Aml-001428	Ailuropoda melanoleuca	97.05	1.00e-152	532.00
IUUC-Atr-003164	Amborella trichopoda	60.35	3.00e-112	397.00
IUUC-Aca-004270	Anolis carolinensis	90.66	2.00e-155	541.00
IUUC-Aly-005659	Arabidopsis lyrata	61.62	9.00e-115	405.00
IUUC-Ath-006764	Arabidopsis thaliana	60.92	2.00e-114	405.00
IUUC-Acl-008324	Aspergillus clavatus	47.39	3.00e-83	301.00
IUUC-Afl-008607	Aspergillus flavus	48.78	6.00e-84	303.00
IUUC-Afu-008998	Aspergillus fumigatus	47.04	4.00e-83	300.00
IUUC-Ani-009363	Aspergillus nidulans	47.04	2.00e-84	305.00
IUUC-Ang-009513	Aspergillus niger	48.08	3.00e-79	288.00
IUUC-Aor-010237	Aspergillus oryzae	48.78	3.00e-84	305.00
IUUC-Ate-010374	Aspergillus terreus	48.52	6.00e-80	290.00
IUUC-Ame-010728	Astyanax mexicanus	90.24	2.00e-152	531.00
IUUC-Bgr-012297	Blumeria graminis	46.52	4.00e-70	257.00
IUUC-Bta-012433	Bos taurus	97.21	3.00e-162	563.00
IUUC-Bci-013763	Botrytis cinerea	49.65	2.00e-84	305.00
IUUC-Bdi-014490	Brachypodium distachyon	58.74	2.00e-109	388.00
IUUC-Bol-016479	Brassica oleracea	61.62	2.00e-114	405.00
IUUC-Bra-017219	Brassica rapa	61.62	1.00e-114	405.00
IUUC-Cel-018512	Caenorhabditis elegans	58.30	3.00e-104	371.00
IUUC-Cja-019308	Callithrix jacchus	96.86	4.00e-162	563.00
IUUC-Cfa-020998	Canis familiaris	97.21	3.00e-162	563.00
IUUC-Cpo-021580	Cavia porcellus	97.21	2.00e-162	564.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	55.02	3.00e-99	354.00
IUUC-Csa-023456	Chlorocebus sabaeus	96.86	6.00e-162	562.00
IUUC-Cho-024644	Choloepus hoffmanni	97.21	6.00e-162	562.00
IUUC-Cin-025463	Ciona intestinalis	62.24	3.00e-113	401.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	47.92	3.00e-84	305.00
IUUC-Cne-026780	Cryptococcus neoformans	41.36	3.00e-61	228.00
IUUC-Dre-027671	Danio rerio	88.85	6.00e-160	556.00
IUUC-Dno-029769	Dasypus novemcinctus	97.21	4.00e-162	563.00
IUUC-Dor-030776	Dipodomys ordii	98.13	2.00e-60	224.00
IUUC-Dse-031316	Dothistroma septosporum	43.71	3.00e-78	285.00
IUUC-Dme-031756	Drosophila melanogaster	61.40	6.00e-113	400.00
IUUC-Ete-032753	Echinops telfairi	89.55	8.00e-140	489.00
IUUC-Eca-033979	Equus caballus	97.21	3.00e-162	563.00
IUUC-Eeu-034862	Erinaceus europaeus	96.40	1.00e-70	259.00
IUUC-Fca-036110	Felis catus	97.89	1.00e-131	462.00
IUUC-Fal-037648	Ficedula albicollis	98.95	2.00e-163	568.00
IUUC-Fox-037861	Fusarium oxysporum	45.49	8.00e-82	296.00
IUUC-Fso-038405	Fusarium solani	45.49	1.00e-81	296.00
IUUC-Gmo-039383	Gadus morhua	91.29	3.00e-154	537.00
IUUC-Ggr-040082	Gaeumannomyces graminis	43.40	7.00e-71	260.00
IUUC-Gga-040785	Gallus gallus	100.00	3.00e-165	573.00
IUUC-Gac-041645	Gasterosteus aculeatus	91.29	4.00e-154	536.00
IUUC-Gma-044329	Glycine max	61.27	4.00e-113	400.00
IUUC-Ggo-044800	Gorilla gorilla	85.29	6.00e-128	450.00
IUUC-Hsa-045918	Homo sapiens	96.86	6.00e-162	562.00
IUUC-Hvu-047342	Hordeum vulgare	58.39	1.00e-109	389.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	97.97	1.00e-85	308.00
IUUC-Kpa-049149	Komagataella pastoris	33.56	2.00e-32	132.00
IUUC-Lch-050395	Latimeria chalumnae	91.99	4.00e-165	573.00
IUUC-Lpe-051275	Leersia perrieri	59.09	3.00e-110	391.00
IUUC-Loc-052666	Lepisosteus oculatus	92.68	3.00e-151	527.00
IUUC-Lma-053129	Leptosphaeria maculans	43.90	2.00e-76	279.00
IUUC-Laf-054512	Loxodonta africana	97.21	3.00e-162	563.00
IUUC-Mcc-055819	Macaca mulatta	96.86	8.00e-162	562.00
IUUC-Meu-056350	Macropus eugenii	86.06	1.00e-136	479.00
IUUC-Mor-057063	Magnaporthe oryzae	46.53	2.00e-80	292.00
IUUC-Mpo-057369	Magnaporthe poae	44.44	1.00e-71	262.00
IUUC-Mtr-058228	Medicago truncatula	60.21	2.00e-112	398.00
IUUC-Mla-059093	Melampsora laricipopulina	42.28	2.00e-62	231.00
IUUC-Mga-059719	Meleagris gallopavo	99.65	2.00e-164	571.00
IUUC-Mvi-060285	Microbotryum violaceum	38.49	2.00e-54	205.00
IUUC-Mmr-061685	Microcebus murinus	89.55	7.00e-143	499.00
IUUC-Mdo-062121	Monodelphis domestica	97.21	9.00e-161	558.00
IUUC-Mmu-063216	Mus musculus	97.21	5.00e-162	563.00
IUUC-Mac-065463	Musa acuminata	56.34	2.00e-100	358.00
IUUC-Mpu-066390	Mustela putorius furo	97.21	4.00e-162	563.00
IUUC-Mlu-067686	Myotis lucifugus	93.38	9.00e-154	535.00
IUUC-Nfi-068509	Neosartorya fischeri	47.39	2.00e-83	301.00
IUUC-Ncr-068870	Neurospora crassa	47.22	4.00e-82	297.00
IUUC-Nle-069539	Nomascus leucogenys	96.86	5.00e-162	563.00
IUUC-Opr-070555	Ochotona princeps	83.28	7.00e-142	496.00
IUUC-Ont-071490	Oreochromis niloticus	89.93	3.00e-151	527.00
IUUC-Oan-073044	Ornithorhynchus anatinus	84.14	4.00e-131	460.00
IUUC-Ocu-073764	Oryctolagus cuniculus	97.21	2.00e-162	565.00
IUUC-Oba-075704	Oryza barthii	59.09	3.00e-110	390.00
IUUC-Obr-076455	Oryza brachyantha	59.44	5.00e-110	390.00
IUUC-Ogl-077382	Oryza glaberrima	59.09	3.00e-110	390.00
IUUC-Ogu-078739	Oryza glumaepatula	59.09	3.00e-110	390.00
IUUC-Oin-079072	Oryza indica	59.09	3.00e-110	390.00
IUUC-Olo-080809	Oryza longistaminata	59.09	3.00e-110	390.00
IUUC-Ome-081677	Oryza meridionalis	59.09	6.00e-110	389.00
IUUC-Oni-082937	Oryza nivara	59.09	3.00e-110	390.00
IUUC-Opu-083510	Oryza punctata	59.09	3.00e-110	390.00
IUUC-Oru-084360	Oryza rufipogon	59.09	4.00e-110	390.00
IUUC-Osa-085640	Oryza sativa	59.09	3.00e-110	391.00
IUUC-Ola-086504	Oryzias latipes	89.90	4.00e-153	533.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.87	1.00e-59	222.00
IUUC-Oga-088773	Otolemur garnettii	97.21	3.00e-162	564.00
IUUC-Oar-089677	Ovis aries	96.21	1.00e-160	558.00
IUUC-Ptr-090724	Pan troglodytes	96.69	6.00e-153	533.00
IUUC-Pan-092683	Papio anubis	96.86	6.00e-162	562.00
IUUC-Psi-093415	Pelodiscus sinensis	98.95	2.00e-163	567.00
IUUC-Pma-094562	Petromyzon marinus	82.23	6.00e-151	526.00
IUUC-Pno-095014	Phaeosphaeria nodorum	47.43	1.00e-77	283.00
IUUC-Ppa-095822	Physcomitrella patens	61.97	4.00e-112	397.00
IUUC-Pfo-096579	Poecilia formosa	90.24	6.00e-153	533.00
IUUC-Pab-098313	Pongo abelii	96.86	6.00e-162	562.00
IUUC-Pop-099747	Populus trichocarpa	62.68	6.00e-116	409.00
IUUC-Pca-100871	Procavia capensis	83.21	7.00e-128	449.00
IUUC-Ppe-101389	Prunus persica	63.03	2.00e-115	407.00
IUUC-Pva-102468	Pteropus vampyrus	80.14	9.00e-124	436.00
IUUC-Pgr-103523	Puccinia graminis	41.28	2.00e-65	242.00
IUUC-Ptt-103930	Puccinia triticina	40.94	3.00e-65	241.00
IUUC-Pte-104299	Pyrenophora teres	47.39	2.00e-82	298.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	48.08	2.00e-83	301.00
IUUC-Rno-105796	Rattus norvegicus	96.86	2.00e-161	561.00
IUUC-Sha-107191	Sarcophilus harrisii	97.21	9.00e-161	558.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	38.25	4.00e-61	227.00
IUUC-Spo-108249	Schizosaccharomyces pombe	43.86	3.00e-74	271.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	48.61	2.00e-83	302.00
IUUC-Sit-110805	Setaria italica	58.39	2.00e-109	388.00
IUUC-Sly-111567	Solanum lycopersicum	63.03	6.00e-116	409.00
IUUC-Stu-112562	Solanum tuberosum	63.03	7.00e-117	413.00
IUUC-Sar-112991	Sorex araneus	95.89	2.00e-118	417.00
IUUC-Sbi-114010	Sorghum bicolor	58.39	2.00e-109	388.00
IUUC-Sre-114947	Sporisorium reilianum	42.62	6.00e-69	254.00
IUUC-Ssc-115371	Sus scrofa	97.21	3.00e-162	563.00
IUUC-Tgu-117429	Taeniopygia guttata	96.17	2.00e-163	568.00
IUUC-Tru-118081	Takifugu rubripes	91.29	3.00e-154	537.00
IUUC-Tsy-119101	Tarsius syrichta	82.93	1.00e-132	465.00
IUUC-Tni-120532	Tetraodon nigroviridis	90.94	1.00e-153	535.00
IUUC-Tca-121373	Theobroma cacao	63.03	1.00e-115	409.00
IUUC-Tre-122050	Trichoderma reesei	45.14	5.00e-81	293.00
IUUC-Tvi-122394	Trichoderma virens	45.59	2.00e-75	275.00
IUUC-Tae-124661	Triticum aestivum	58.54	3.00e-109	387.00
IUUC-Tme-126998	Tuber melanosporum	50.00	4.00e-85	307.00
IUUC-Tbe-128032	Tupaia belangeri	97.21	3.00e-162	563.00
IUUC-Ttr-129102	Tursiops truncatus	85.37	1.00e-134	472.00
IUUC-Uma-129363	Ustilago maydis	43.14	3.00e-72	265.00
IUUC-Vda-129891	Verticillium dahliae	48.96	4.00e-83	301.00
IUUC-Vpa-130827	Vicugna pacos	96.86	5.00e-162	563.00
IUUC-Vvi-131202	Vitis vinifera	61.62	3.00e-114	404.00
IUUC-Xtr-132769	Xenopus tropicalis	92.39	2.00e-153	535.00
IUUC-Xma-133147	Xiphophorus maculatus	90.24	1.00e-152	531.00
IUUC-Yli-134352	Yarrowia lipolytica	33.81	3.00e-34	138.00
IUUC-Zma-135294	Zea mays	58.39	3.00e-109	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence