iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mpu-066390

Ensembl Protein ID

ENSMPUP00000015341.1

UniProt Accession

M3YVI1; M3YVI1_MUSPF

Genbank Protein ID

ENSMPUP00000015341

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEYP01007961

Gene Name

SNRNP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMPUG00000015451.1	ENSMPUT00000015580.1	ENSMPUP00000015341.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-46	154.4	150	184
UBD/Beta-Prp	9.60e-80	267.9	63	266

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 150  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 184
           8*******9659955588999***********876 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 63   LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 150
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 151  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++r+Wd+r
   Q: 238  SVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
           ***************************97 PP

Organism

Mustela putorius furo

Protein Sequence
(Fasta)

MIEQQKRKGP ELPLVPVKRQ RHELLLGAAG SGPGAGQQPT APGALLQAGP PRCSSLQAPI 60
MLLSGHEGEV YCCKFHPNGS TLASAGFDRL ILLWNVYGDC DNYATLKGHS GAVMELHYNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGCGCGTT GCCTGAGTGT GTCGGCGCGG TCAGTGGCGG CGCTGAGGAG AGTGGTTGCC 60
GCCATGATAG AGCAGCAAAA GCGCAAAGGC CCAGAGTTGC CACTGGTTCC AGTCAAGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	57.63	2.00e-120	425.00
IUUC-Aml-001428	Ailuropoda melanoleuca	96.49	1.00e-180	625.00
IUUC-Atr-003164	Amborella trichopoda	57.88	3.00e-122	431.00
IUUC-Apl-003447	Anas platyrhynchos	97.21	3.00e-162	563.00
IUUC-Aca-004270	Anolis carolinensis	91.26	4.00e-169	587.00
IUUC-Aly-005659	Arabidopsis lyrata	61.44	2.00e-124	438.00
IUUC-Ath-006764	Arabidopsis thaliana	61.81	1.00e-123	436.00
IUUC-Acl-008324	Aspergillus clavatus	49.37	3.00e-94	338.00
IUUC-Afl-008607	Aspergillus flavus	49.66	2.00e-89	322.00
IUUC-Afu-008998	Aspergillus fumigatus	49.05	5.00e-94	337.00
IUUC-Ani-009363	Aspergillus nidulans	49.05	2.00e-95	342.00
IUUC-Ang-009513	Aspergillus niger	48.51	5.00e-85	307.00
IUUC-Aor-010237	Aspergillus oryzae	50.32	1.00e-95	342.00
IUUC-Ate-010374	Aspergillus terreus	46.20	3.00e-83	301.00
IUUC-Ame-010728	Astyanax mexicanus	83.06	6.00e-171	593.00
IUUC-Bgr-012297	Blumeria graminis	46.15	3.00e-70	258.00
IUUC-Bta-012433	Bos taurus	99.44	0.00e+00	654.00
IUUC-Bci-013763	Botrytis cinerea	50.62	8.00e-96	343.00
IUUC-Bdi-014490	Brachypodium distachyon	58.92	2.00e-119	421.00
IUUC-Bol-016479	Brassica oleracea	61.86	3.00e-124	437.00
IUUC-Bra-017219	Brassica rapa	62.14	4.00e-124	437.00
IUUC-Cel-018512	Caenorhabditis elegans	56.39	3.00e-113	401.00
IUUC-Cja-019308	Callithrix jacchus	98.32	0.00e+00	657.00
IUUC-Cfa-020998	Canis familiaris	99.72	0.00e+00	660.00
IUUC-Cpo-021580	Cavia porcellus	98.04	0.00e+00	654.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	54.78	1.00e-107	382.00
IUUC-Csa-023456	Chlorocebus sabaeus	96.65	0.00e+00	655.00
IUUC-Cho-024644	Choloepus hoffmanni	99.68	2.00e-179	621.00
IUUC-Cin-025463	Ciona intestinalis	58.84	2.00e-126	445.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	48.10	2.00e-94	338.00
IUUC-Cne-026780	Cryptococcus neoformans	41.96	3.00e-67	248.00
IUUC-Dre-027671	Danio rerio	81.11	1.00e-176	612.00
IUUC-Dno-029769	Dasypus novemcinctus	98.88	0.00e+00	664.00
IUUC-Dor-030776	Dipodomys ordii	97.19	6.00e-86	310.00
IUUC-Dse-031316	Dothistroma septosporum	43.11	1.00e-85	309.00
IUUC-Dme-031756	Drosophila melanogaster	61.78	8.00e-125	439.00
IUUC-Ete-032753	Echinops telfairi	89.66	2.00e-164	571.00
IUUC-Eca-033979	Equus caballus	99.16	0.00e+00	654.00
IUUC-Eeu-034862	Erinaceus europaeus	100.00	3.00e-72	265.00
IUUC-Fca-036110	Felis catus	99.68	5.00e-160	556.00
IUUC-Fal-037648	Ficedula albicollis	97.10	1.00e-176	612.00
IUUC-Fox-037861	Fusarium oxysporum	46.28	1.00e-91	330.00
IUUC-Fso-038405	Fusarium solani	46.28	2.00e-91	328.00
IUUC-Gmo-039383	Gadus morhua	82.78	4.00e-172	597.00
IUUC-Ggr-040082	Gaeumannomyces graminis	45.43	1.00e-83	303.00
IUUC-Gga-040785	Gallus gallus	90.86	7.00e-180	622.00
IUUC-Gac-041645	Gasterosteus aculeatus	83.06	1.00e-169	588.00
IUUC-Gma-044329	Glycine max	60.50	5.00e-123	434.00
IUUC-Ggo-044800	Gorilla gorilla	87.17	3.00e-158	551.00
IUUC-Hsa-045918	Homo sapiens	96.65	0.00e+00	655.00
IUUC-Hvu-047342	Hordeum vulgare	57.63	6.00e-120	423.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	98.63	8.00e-113	399.00
IUUC-Kpa-049149	Komagataella pastoris	34.30	1.00e-36	147.00
IUUC-Lch-050395	Latimeria chalumnae	86.63	0.00e+00	650.00
IUUC-Lpe-051275	Leersia perrieri	59.24	3.00e-120	425.00
IUUC-Loc-052666	Lepisosteus oculatus	85.64	2.00e-172	597.00
IUUC-Lma-053129	Leptosphaeria maculans	45.25	7.00e-88	317.00
IUUC-Laf-054512	Loxodonta africana	96.37	0.00e+00	649.00
IUUC-Mcc-055819	Macaca mulatta	96.65	0.00e+00	655.00
IUUC-Meu-056350	Macropus eugenii	83.10	7.00e-159	553.00
IUUC-Mor-057063	Magnaporthe oryzae	48.42	9.00e-92	330.00
IUUC-Mpo-057369	Magnaporthe poae	46.37	2.00e-84	305.00
IUUC-Mtr-058228	Medicago truncatula	59.56	2.00e-122	432.00
IUUC-Mla-059093	Melampsora laricipopulina	42.38	3.00e-69	255.00
IUUC-Mga-059719	Meleagris gallopavo	96.82	3.00e-178	617.00
IUUC-Mvi-060285	Microbotryum violaceum	40.12	2.00e-63	236.00
IUUC-Mmr-061685	Microcebus murinus	92.74	2.00e-171	594.00
IUUC-Mdo-062121	Monodelphis domestica	91.97	0.00e+00	635.00
IUUC-Mmu-063216	Mus musculus	97.77	0.00e+00	665.00
IUUC-Mac-065463	Musa acuminata	55.62	9.00e-110	389.00
IUUC-Mlu-066932	Myotis lucifugus	99.42	0.00e+00	627.00
IUUC-Nfi-068509	Neosartorya fischeri	49.37	3.00e-94	338.00
IUUC-Ncr-068870	Neurospora crassa	47.95	9.00e-93	333.00
IUUC-Nle-069539	Nomascus leucogenys	96.65	0.00e+00	655.00
IUUC-Opr-070555	Ochotona princeps	87.15	6.00e-168	583.00
IUUC-Ont-071490	Oreochromis niloticus	82.27	2.00e-169	587.00
IUUC-Oan-073044	Ornithorhynchus anatinus	79.61	1.00e-154	538.00
IUUC-Ocu-073764	Oryctolagus cuniculus	98.88	0.00e+00	671.00
IUUC-Oba-075704	Oryza barthii	59.24	3.00e-120	424.00
IUUC-Obr-076455	Oryza brachyantha	59.55	7.00e-120	423.00
IUUC-Ogl-077382	Oryza glaberrima	59.55	2.00e-120	425.00
IUUC-Ogu-078739	Oryza glumaepatula	59.24	3.00e-120	424.00
IUUC-Oin-079072	Oryza indica	59.24	3.00e-120	424.00
IUUC-Olo-080809	Oryza longistaminata	59.24	3.00e-120	424.00
IUUC-Ome-081677	Oryza meridionalis	59.24	9.00e-120	422.00
IUUC-Oni-082937	Oryza nivara	59.24	3.00e-120	424.00
IUUC-Opu-083510	Oryza punctata	59.24	3.00e-120	424.00
IUUC-Oru-084360	Oryza rufipogon	59.24	4.00e-120	424.00
IUUC-Osa-085640	Oryza sativa	59.24	3.00e-120	424.00
IUUC-Ola-086504	Oryzias latipes	82.50	1.00e-171	595.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.64	3.00e-63	234.00
IUUC-Oga-088773	Otolemur garnettii	98.88	0.00e+00	658.00
IUUC-Oar-089677	Ovis aries	98.61	0.00e+00	649.00
IUUC-Ptr-090724	Pan troglodytes	96.50	1.00e-180	625.00
IUUC-Pan-092683	Papio anubis	96.65	0.00e+00	655.00
IUUC-Psi-093415	Pelodiscus sinensis	98.05	3.00e-176	610.00
IUUC-Pma-094562	Petromyzon marinus	75.14	5.00e-167	580.00
IUUC-Pno-095014	Phaeosphaeria nodorum	48.84	2.00e-88	319.00
IUUC-Ppa-095728	Physcomitrella patens	57.79	1.00e-121	429.00
IUUC-Pfo-096579	Poecilia formosa	81.94	1.00e-168	585.00
IUUC-Pab-098313	Pongo abelii	96.65	0.00e+00	655.00
IUUC-Pop-099747	Populus trichocarpa	61.49	3.00e-123	434.00
IUUC-Pca-100871	Procavia capensis	85.36	4.00e-130	456.00
IUUC-Ppe-101389	Prunus persica	61.51	3.00e-124	437.00
IUUC-Pva-102468	Pteropus vampyrus	85.20	1.00e-150	525.00
IUUC-Pgr-103523	Puccinia graminis	41.69	3.00e-73	268.00
IUUC-Ptt-103930	Puccinia triticina	41.69	2.00e-72	266.00
IUUC-Pte-104299	Pyrenophora teres	48.43	5.00e-94	337.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	49.06	3.00e-94	338.00
IUUC-Rno-105796	Rattus norvegicus	98.32	0.00e+00	657.00
IUUC-Sha-107191	Sarcophilus harrisii	91.69	0.00e+00	635.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	38.78	8.00e-64	237.00
IUUC-Spo-108249	Schizosaccharomyces pombe	43.81	2.00e-80	291.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	49.84	2.00e-94	338.00
IUUC-Sit-110805	Setaria italica	58.28	4.00e-119	421.00
IUUC-Sly-111567	Solanum lycopersicum	61.44	5.00e-126	443.00
IUUC-Stu-112562	Solanum tuberosum	61.44	3.00e-127	447.00
IUUC-Sar-112991	Sorex araneus	98.63	2.00e-120	424.00
IUUC-Sbi-114010	Sorghum bicolor	57.76	4.00e-119	421.00
IUUC-Sre-114947	Sporisorium reilianum	42.99	6.00e-74	271.00
IUUC-Ssc-115371	Sus scrofa	99.44	0.00e+00	654.00
IUUC-Tgu-117429	Taeniopygia guttata	94.46	2.00e-174	604.00
IUUC-Tru-118081	Takifugu rubripes	83.33	3.00e-172	597.00
IUUC-Tsy-119101	Tarsius syrichta	86.87	1.00e-159	555.00
IUUC-Tni-120532	Tetraodon nigroviridis	82.78	1.00e-169	588.00
IUUC-Tca-121373	Theobroma cacao	61.13	9.00e-126	442.00
IUUC-Tre-122050	Trichoderma reesei	45.63	2.00e-90	325.00
IUUC-Tvi-122394	Trichoderma virens	44.82	1.00e-84	306.00
IUUC-Tae-124661	Triticum aestivum	57.76	2.00e-119	422.00
IUUC-Tme-126998	Tuber melanosporum	51.46	3.00e-94	338.00
IUUC-Tbe-128032	Tupaia belangeri	98.60	0.00e+00	659.00
IUUC-Ttr-129102	Tursiops truncatus	88.83	3.00e-160	557.00
IUUC-Uma-129363	Ustilago maydis	43.61	2.00e-77	282.00
IUUC-Vda-129891	Verticillium dahliae	49.21	1.00e-93	336.00
IUUC-Vpa-130827	Vicugna pacos	98.60	0.00e+00	651.00
IUUC-Vvi-131202	Vitis vinifera	60.50	3.00e-124	437.00
IUUC-Xtr-132769	Xenopus tropicalis	82.61	4.00e-169	587.00
IUUC-Xma-133147	Xiphophorus maculatus	82.22	3.00e-168	583.00
IUUC-Yli-134352	Yarrowia lipolytica	34.11	2.00e-36	145.00
IUUC-Zma-135294	Zea mays	58.04	8.00e-119	419.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence