iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126531

Ensembl Protein ID

TRIUR3_28578-P1

UniProt Accession

M7YJ12; M7YJ12_TRIUA

Genbank Protein ID

EMS50433.1

Protein Name

WD repeat-containing protein LWD1

Genbank Nucleotide ID

KD231786

Gene Name

TRIUR3_28578

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_28578	TRIUR3_28578-T1	TRIUR3_28578-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-13	49.7	202	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++v+Dlr+
   Q: 202  HDKEVYDIAWGGaGVFASVSADGSVRVFDLRD 233
           8899******55699**************987 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MGGGGAAGDA DGWADQDQGN GGSRGGGEAK RSEIYTYEAG WHIYGMNWSV RRDKKYRLAI 60
ASLLEQLVNR VEVVQLDEST GDIAPVLSFD HPFPPTKSMF VPDPQGLRPD LLATSADLLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGGCG GCGGCGCAGC CGGGGATGCC GATGGGTGGG CGGATCAGGA CCAGGGCAAC 60
GGCGGGAGCC GCGGCGGGGG TGAGGCGAAG CGGTCGGAGA TCTATACCTA CGAGGCCGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002310	Ailuropoda melanoleuca	50.00	1.00e-91	328.00
IUUC-Atr-002576	Amborella trichopoda	71.09	4.00e-149	519.00
IUUC-Apl-003746	Anas platyrhynchos	50.00	1.00e-91	328.00
IUUC-Aca-005293	Anolis carolinensis	50.77	3.00e-108	384.00
IUUC-Aly-006500	Arabidopsis lyrata	70.82	5.00e-150	522.00
IUUC-Ath-006739	Arabidopsis thaliana	70.56	1.00e-149	521.00
IUUC-Ago-007732	Ashbya gossypii	31.44	1.00e-40	160.00
IUUC-Acl-008299	Aspergillus clavatus	35.93	6.00e-38	151.00
IUUC-Afl-008470	Aspergillus flavus	33.83	8.00e-31	127.00
IUUC-Afu-008896	Aspergillus fumigatus	34.15	8.00e-33	134.00
IUUC-Ani-009375	Aspergillus nidulans	34.03	1.00e-31	130.00
IUUC-Ang-009687	Aspergillus niger	36.04	5.00e-38	151.00
IUUC-Aor-010198	Aspergillus oryzae	33.33	4.00e-31	128.00
IUUC-Ate-010363	Aspergillus terreus	34.98	1.00e-29	123.00
IUUC-Ame-010643	Astyanax mexicanus	45.29	1.00e-87	315.00
IUUC-Bgr-012055	Blumeria graminis	37.39	1.00e-40	160.00
IUUC-Bta-013199	Bos taurus	50.77	4.00e-108	383.00
IUUC-Bci-013840	Botrytis cinerea	36.69	4.00e-38	151.00
IUUC-Bdi-014374	Brachypodium distachyon	88.72	9.00e-176	608.00
IUUC-Bol-015620	Brassica oleracea	51.72	1.00e-98	352.00
IUUC-Bra-017922	Brassica rapa	69.50	2.00e-146	510.00
IUUC-Cel-018487	Caenorhabditis elegans	45.32	1.00e-92	332.00
IUUC-Cja-018736	Callithrix jacchus	50.77	4.00e-108	383.00
IUUC-Cfa-020446	Canis familiaris	50.77	4.00e-108	383.00
IUUC-Cpo-022424	Cavia porcellus	50.77	4.00e-108	383.00
IUUC-Cre-022609	Chlamydomonas reinhardtii	61.07	4.00e-122	429.00
IUUC-Csa-024013	Chlorocebus sabaeus	49.86	4.00e-94	338.00
IUUC-Cho-024507	Choloepus hoffmanni	50.43	2.00e-91	327.00
IUUC-Cin-025620	Ciona intestinalis	50.51	2.00e-107	381.00
IUUC-Csv-026111	Ciona savignyi	50.00	9.00e-107	379.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	35.63	2.00e-40	159.00
IUUC-Cne-026871	Cryptococcus neoformans	31.70	1.00e-38	152.00
IUUC-Cme-027345	Cyanidioschyzon merolae	29.02	6.00e-38	150.00
IUUC-Dre-027940	Danio rerio	51.03	4.00e-108	383.00
IUUC-Dno-029520	Dasypus novemcinctus	50.77	4.00e-108	383.00
IUUC-Dor-030262	Dipodomys ordii	50.86	3.00e-29	121.00
IUUC-Dse-031207	Dothistroma septosporum	36.57	2.00e-28	119.00
IUUC-Dme-031639	Drosophila melanogaster	51.41	3.00e-109	387.00
IUUC-Ete-032605	Echinops telfairi	43.81	2.00e-79	287.00
IUUC-Eca-033668	Equus caballus	47.46	1.00e-93	335.00
IUUC-Fca-035942	Felis catus	50.77	4.00e-108	383.00
IUUC-Fal-037544	Ficedula albicollis	50.77	4.00e-108	383.00
IUUC-Fox-037852	Fusarium oxysporum	37.95	9.00e-40	157.00
IUUC-Fso-038173	Fusarium solani	35.44	7.00e-38	150.00
IUUC-Gmo-038850	Gadus morhua	51.03	3.00e-108	384.00
IUUC-Ggr-040072	Gaeumannomyces graminis	37.54	3.00e-36	145.00
IUUC-Gga-040439	Gallus gallus	50.77	4.00e-108	383.00
IUUC-Gac-041776	Gasterosteus aculeatus	50.77	7.00e-108	382.00
IUUC-Gma-043558	Glycine max	71.09	7.00e-151	525.00
IUUC-Ggo-044490	Gorilla gorilla	50.77	4.00e-108	383.00
IUUC-Hsa-046015	Homo sapiens	50.77	4.00e-108	383.00
IUUC-Hvu-047667	Hordeum vulgare	95.35	0.00e+00	652.00
IUUC-Itr-048428	Ictidomys tridecemlineatus	50.77	4.00e-108	383.00
IUUC-Kpa-049347	Komagataella pastoris	29.97	1.00e-37	149.00
IUUC-Lch-049754	Latimeria chalumnae	51.03	2.00e-108	384.00
IUUC-Lpe-050741	Leersia perrieri	84.16	2.00e-172	597.00
IUUC-Loc-052351	Lepisosteus oculatus	50.77	2.00e-106	377.00
IUUC-Lma-053005	Leptosphaeria maculans	36.20	2.00e-36	146.00
IUUC-Laf-054077	Loxodonta africana	50.77	4.00e-108	383.00
IUUC-Mcc-055728	Macaca mulatta	50.77	4.00e-108	383.00
IUUC-Meu-056685	Macropus eugenii	53.81	1.00e-56	212.00
IUUC-Mor-057075	Magnaporthe oryzae	34.50	4.00e-33	134.00
IUUC-Mpo-057336	Magnaporthe poae	36.12	7.00e-37	147.00
IUUC-Mtr-057654	Medicago truncatula	72.15	3.00e-151	526.00
IUUC-Mla-058866	Melampsora laricipopulina	34.98	3.00e-41	161.00
IUUC-Mga-059566	Meleagris gallopavo	50.00	1.00e-91	328.00
IUUC-Mvi-060379	Microbotryum violaceum	42.86	2.00e-38	152.00
IUUC-Mmr-060831	Microcebus murinus	50.77	4.00e-108	383.00
IUUC-Mdo-062612	Monodelphis domestica	50.77	4.00e-108	383.00
IUUC-Mmu-063399	Mus musculus	50.77	4.00e-108	383.00
IUUC-Mac-065226	Musa acuminata	68.27	4.00e-135	473.00
IUUC-Mpu-065951	Mustela putorius furo	50.77	4.00e-108	383.00
IUUC-Mlu-067858	Myotis lucifugus	50.90	3.00e-107	380.00
IUUC-Nfi-068302	Neosartorya fischeri	35.33	1.00e-36	146.00
IUUC-Ncr-068642	Neurospora crassa	37.24	1.00e-37	150.00
IUUC-Nle-070059	Nomascus leucogenys	50.77	4.00e-108	383.00
IUUC-Opr-070572	Ochotona princeps	51.03	2.00e-108	384.00
IUUC-Ont-071420	Oreochromis niloticus	48.72	1.00e-102	365.00
IUUC-Ocu-074105	Oryctolagus cuniculus	50.77	4.00e-108	383.00
IUUC-Oba-075409	Oryza barthii	86.68	3.00e-171	593.00
IUUC-Obr-076284	Oryza brachyantha	84.39	4.00e-148	516.00
IUUC-Ogl-076984	Oryza glaberrima	86.68	2.00e-171	594.00
IUUC-Ogu-078283	Oryza glumaepatula	86.68	2.00e-171	593.00
IUUC-Olo-081042	Oryza longistaminata	89.81	1.00e-120	424.00
IUUC-Ome-081174	Oryza meridionalis	86.68	2.00e-171	594.00
IUUC-Oni-082033	Oryza nivara	86.68	2.00e-171	594.00
IUUC-Opu-084034	Oryza punctata	85.83	1.00e-172	597.00
IUUC-Oru-084908	Oryza rufipogon	84.53	2.00e-151	528.00
IUUC-Osa-085678	Oryza sativa	86.68	2.00e-171	594.00
IUUC-Ola-086324	Oryzias latipes	51.03	2.00e-108	384.00
IUUC-Olu-087620	Ostreococcus lucimarinus	60.53	6.00e-126	442.00
IUUC-Oga-088446	Otolemur garnettii	50.77	4.00e-108	383.00
IUUC-Oar-090168	Ovis aries	50.77	4.00e-108	383.00
IUUC-Ptr-090691	Pan troglodytes	50.90	2.00e-108	384.00
IUUC-Pan-092772	Papio anubis	50.77	4.00e-108	383.00
IUUC-Psi-093304	Pelodiscus sinensis	50.78	4.00e-84	303.00
IUUC-Pma-094292	Petromyzon marinus	49.86	2.00e-91	328.00
IUUC-Pno-094967	Phaeosphaeria nodorum	35.26	1.00e-34	140.00
IUUC-Ppa-095734	Physcomitrella patens	65.07	4.00e-136	476.00
IUUC-Pfo-097157	Poecilia formosa	51.03	2.00e-108	384.00
IUUC-Pab-097898	Pongo abelii	49.86	1.00e-93	337.00
IUUC-Pop-099943	Populus trichocarpa	72.41	2.00e-154	537.00
IUUC-Pca-100404	Procavia capensis	51.03	2.00e-108	384.00
IUUC-Ppe-102015	Prunus persica	71.35	3.00e-150	523.00
IUUC-Pva-102938	Pteropus vampyrus	46.36	4.00e-54	204.00
IUUC-Pgr-103490	Puccinia graminis	35.18	2.00e-52	198.00
IUUC-Ptt-103946	Puccinia triticina	38.35	6.00e-53	200.00
IUUC-Pte-104094	Pyrenophora teres	36.20	1.00e-36	147.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	36.20	1.00e-36	147.00
IUUC-Rno-104961	Rattus norvegicus	50.77	4.00e-108	383.00
IUUC-Sce-106252	Saccharomyces cerevisiae	34.56	5.00e-42	164.00
IUUC-Sha-107196	Sarcophilus harrisii	42.53	8.00e-87	312.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	37.81	2.00e-42	165.00
IUUC-Spo-108014	Schizosaccharomyces pombe	32.35	1.00e-42	166.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	37.06	7.00e-38	151.00
IUUC-Smo-109172	Selaginella moellendorffii	61.97	5.00e-126	442.00
IUUC-Sit-110625	Setaria italica	83.67	3.00e-122	430.00
IUUC-Sly-111410	Solanum lycopersicum	71.09	4.00e-150	522.00
IUUC-Stu-112854	Solanum tuberosum	70.82	2.00e-149	520.00
IUUC-Sar-113705	Sorex araneus	53.81	6.00e-57	213.00
IUUC-Sbi-114474	Sorghum bicolor	82.69	6.00e-168	582.00
IUUC-Sre-114968	Sporisorium reilianum	36.00	4.00e-48	185.00
IUUC-Ssc-116028	Sus scrofa	50.77	4.00e-108	383.00
IUUC-Tgu-117189	Taeniopygia guttata	50.77	4.00e-108	383.00
IUUC-Tru-117581	Takifugu rubripes	51.03	2.00e-108	384.00
IUUC-Tsy-119425	Tarsius syrichta	39.13	4.00e-59	220.00
IUUC-Tni-120649	Tetraodon nigroviridis	50.77	1.00e-106	378.00
IUUC-Tca-121561	Theobroma cacao	71.62	5.00e-151	525.00
IUUC-Tre-121987	Trichoderma reesei	35.95	4.00e-38	151.00
IUUC-Tvi-122586	Trichoderma virens	35.87	9.00e-38	150.00
IUUC-Tae-125627	Triticum aestivum	96.90	0.00e+00	650.00
IUUC-Tme-126973	Tuber melanosporum	36.95	6.00e-33	135.00
IUUC-Tbe-127919	Tupaia belangeri	51.03	2.00e-108	384.00
IUUC-Ttr-129135	Tursiops truncatus	58.55	2.00e-58	218.00
IUUC-Uma-129362	Ustilago maydis	49.50	9.00e-45	174.00
IUUC-Vda-130025	Verticillium dahliae	36.53	2.00e-38	153.00
IUUC-Vpa-130486	Vicugna pacos	30.23	4.00e-37	147.00
IUUC-Vvi-131265	Vitis vinifera	71.35	1.00e-150	524.00
IUUC-Xtr-132175	Xenopus tropicalis	50.77	3.00e-108	383.00
IUUC-Xma-134129	Xiphophorus maculatus	51.03	2.00e-108	384.00
IUUC-Yli-134419	Yarrowia lipolytica	36.24	6.00e-50	190.00
IUUC-Zma-135092	Zea mays	81.70	6.00e-169	585.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence