iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017078

Ensembl Protein ID

Bra037314.1-P

UniProt Accession

M4F8A3; M4F8A3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra037314	Bra037314.1	Bra037314.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-17	63.4	81	114

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH dsv +l+f sd + l+++++Dg+i+v+ l++
   Q: 81   GHGDSVDALCFsSDgKSLATACGDGVIRVFKLDD 114
           8***********999***************9977 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDSILTVGIA SVVLGALIAV VFFSSYLRKR TSEVDSMAKA EPQDPIRIPK SNPKKSHPKS 60
HATDKNQNKR HHPLDLNTLK GHGDSVDALC FSSDGKSLAT ACGDGVIRVF KLDDASSKSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCGA TCCTTACGGT GGGCATCGCA TCTGTTGTTT TGGGTGCGTT GATAGCGGTC 60
GTCTTCTTCA GTAGCTACTT GAGGAAGCGG ACATCGGAGG TGGATTCGAT GGCGAAAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	62.75	6.00e-70	256.00
IUUC-Aml-002212	Ailuropoda melanoleuca	28.92	2.00e-39	156.00
IUUC-Atr-002903	Amborella trichopoda	67.05	3.00e-174	603.00
IUUC-Apl-003635	Anas platyrhynchos	32.31	4.00e-38	151.00
IUUC-Aca-004472	Anolis carolinensis	32.14	1.00e-36	146.00
IUUC-Aly-005761	Arabidopsis lyrata	89.69	0.00e+00	778.00
IUUC-Ath-007476	Arabidopsis thaliana	89.53	0.00e+00	804.00
IUUC-Ame-011221	Astyanax mexicanus	30.68	1.00e-42	166.00
IUUC-Bta-013186	Bos taurus	29.10	4.00e-38	152.00
IUUC-Bdi-014298	Brachypodium distachyon	66.48	1.00e-141	496.00
IUUC-Bol-015192	Brassica oleracea	97.66	0.00e+00	834.00
IUUC-Cel-018602	Caenorhabditis elegans	26.14	1.00e-27	117.00
IUUC-Cja-018909	Callithrix jacchus	31.61	1.00e-36	146.00
IUUC-Cfa-020970	Canis familiaris	29.62	2.00e-39	155.00
IUUC-Cpo-022215	Cavia porcellus	29.89	7.00e-38	151.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	41.01	6.00e-35	139.00
IUUC-Csa-023530	Chlorocebus sabaeus	30.83	1.00e-39	157.00
IUUC-Cho-024598	Choloepus hoffmanni	29.03	6.00e-26	111.00
IUUC-Cin-025486	Ciona intestinalis	26.88	5.00e-30	125.00
IUUC-Csv-025930	Ciona savignyi	24.24	1.00e-21	97.40
IUUC-Dre-027507	Danio rerio	30.97	1.00e-41	164.00
IUUC-Dno-029726	Dasypus novemcinctus	28.72	3.00e-38	152.00
IUUC-Dor-030501	Dipodomys ordii	33.49	9.00e-29	120.00
IUUC-Ete-032794	Echinops telfairi	34.21	4.00e-30	124.00
IUUC-Eca-033982	Equus caballus	31.00	5.00e-37	148.00
IUUC-Eeu-035090	Erinaceus europaeus	36.07	3.00e-30	125.00
IUUC-Fca-035944	Felis catus	29.73	1.00e-40	160.00
IUUC-Fal-036992	Ficedula albicollis	28.65	7.00e-34	137.00
IUUC-Gmo-038710	Gadus morhua	31.38	6.00e-40	158.00
IUUC-Gga-040885	Gallus gallus	37.58	5.00e-28	117.00
IUUC-Gac-041922	Gasterosteus aculeatus	31.34	9.00e-41	160.00
IUUC-Gma-044233	Glycine max	73.22	3.00e-176	610.00
IUUC-Ggo-045172	Gorilla gorilla	30.79	5.00e-39	154.00
IUUC-Hsa-045711	Homo sapiens	30.79	5.00e-39	155.00
IUUC-Itr-048196	Ictidomys tridecemlineatus	28.69	4.00e-37	148.00
IUUC-Lch-049739	Latimeria chalumnae	29.50	2.00e-39	156.00
IUUC-Lpe-050795	Leersia perrieri	55.35	2.00e-120	425.00
IUUC-Loc-052113	Lepisosteus oculatus	29.53	3.00e-37	149.00
IUUC-Laf-053751	Loxodonta africana	29.43	2.00e-41	163.00
IUUC-Mcc-055022	Macaca mulatta	30.79	1.00e-39	157.00
IUUC-Meu-056003	Macropus eugenii	28.16	2.00e-36	146.00
IUUC-Mtr-058500	Medicago truncatula	72.55	7.00e-173	599.00
IUUC-Mga-059278	Meleagris gallopavo	38.79	2.00e-28	119.00
IUUC-Mmr-061148	Microcebus murinus	30.30	2.00e-39	156.00
IUUC-Mdo-063002	Monodelphis domestica	29.84	3.00e-31	129.00
IUUC-Mmu-063607	Mus musculus	27.87	2.00e-36	146.00
IUUC-Mac-065359	Musa acuminata	63.84	2.00e-163	568.00
IUUC-Mpu-066323	Mustela putorius furo	30.25	4.00e-38	151.00
IUUC-Mlu-067946	Myotis lucifugus	29.94	1.00e-39	157.00
IUUC-Nle-069019	Nomascus leucogenys	30.79	5.00e-39	155.00
IUUC-Opr-071047	Ochotona princeps	29.48	2.00e-38	152.00
IUUC-Ont-071694	Oreochromis niloticus	32.30	4.00e-40	158.00
IUUC-Ocu-074493	Oryctolagus cuniculus	30.17	4.00e-37	148.00
IUUC-Oba-075468	Oryza barthii	63.26	1.00e-141	496.00
IUUC-Obr-076681	Oryza brachyantha	66.76	3.00e-134	471.00
IUUC-Ogl-077870	Oryza glaberrima	63.26	1.00e-141	496.00
IUUC-Ogu-078536	Oryza glumaepatula	63.26	7.00e-142	496.00
IUUC-Oin-080175	Oryza indica	63.26	1.00e-141	496.00
IUUC-Olo-080796	Oryza longistaminata	66.76	7.00e-136	476.00
IUUC-Oni-082076	Oryza nivara	63.26	1.00e-141	496.00
IUUC-Opu-083267	Oryza punctata	66.58	7.00e-142	496.00
IUUC-Oru-084553	Oryza rufipogon	63.26	7.00e-142	496.00
IUUC-Osa-085389	Oryza sativa	63.26	1.00e-141	496.00
IUUC-Ola-086414	Oryzias latipes	33.75	9.00e-44	170.00
IUUC-Oga-088656	Otolemur garnettii	30.65	2.00e-37	149.00
IUUC-Oar-089719	Ovis aries	29.10	2.00e-37	149.00
IUUC-Ptr-091087	Pan troglodytes	30.79	5.00e-39	155.00
IUUC-Pan-091709	Papio anubis	30.79	2.00e-39	156.00
IUUC-Psi-093265	Pelodiscus sinensis	29.56	6.00e-34	137.00
IUUC-Ppa-095365	Physcomitrella patens	56.58	4.00e-126	444.00
IUUC-Pfo-097494	Poecilia formosa	31.16	2.00e-42	166.00
IUUC-Pab-098362	Pongo abelii	31.07	1.00e-39	157.00
IUUC-Pop-099474	Populus trichocarpa	68.42	1.00e-169	588.00
IUUC-Pca-101019	Procavia capensis	35.09	3.00e-31	129.00
IUUC-Ppe-102101	Prunus persica	72.18	0.00e+00	652.00
IUUC-Pva-102849	Pteropus vampyrus	31.03	9.00e-40	157.00
IUUC-Rno-105511	Rattus norvegicus	28.25	2.00e-36	146.00
IUUC-Sha-107265	Sarcophilus harrisii	29.25	3.00e-35	142.00
IUUC-Smo-108866	Selaginella moellendorffii	56.55	3.00e-118	417.00
IUUC-Sit-110806	Setaria italica	60.96	2.00e-146	511.00
IUUC-Sly-110994	Solanum lycopersicum	66.82	5.00e-173	600.00
IUUC-Stu-112493	Solanum tuberosum	72.06	4.00e-121	427.00
IUUC-Sar-113628	Sorex araneus	31.40	8.00e-38	150.00
IUUC-Sbi-114397	Sorghum bicolor	58.85	2.00e-143	502.00
IUUC-Ssc-116418	Sus scrofa	29.69	5.00e-40	158.00
IUUC-Tgu-117054	Taeniopygia guttata	31.00	6.00e-36	144.00
IUUC-Tru-118504	Takifugu rubripes	31.66	4.00e-43	168.00
IUUC-Tni-120254	Tetraodon nigroviridis	31.66	5.00e-44	171.00
IUUC-Tca-121085	Theobroma cacao	73.25	1.00e-179	621.00
IUUC-Tae-124791	Triticum aestivum	64.25	5.00e-137	480.00
IUUC-Tur-126756	Triticum urartu	57.64	6.00e-120	423.00
IUUC-Tbe-127903	Tupaia belangeri	29.89	2.00e-37	149.00
IUUC-Ttr-129118	Tursiops truncatus	29.87	6.00e-43	167.00
IUUC-Vvi-131125	Vitis vinifera	69.72	0.00e+00	628.00
IUUC-Xtr-132287	Xenopus tropicalis	32.28	7.00e-40	157.00
IUUC-Xma-134246	Xiphophorus maculatus	31.44	1.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence