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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105377
UUCD1 version UUC-RaN-01086
Ensembl Protein ID ENSRNOP00000072190.1
UniProt Accession A0A0G2K2C7; A0A0G2K2C7_RAT
Genbank Protein ID ENSRNOP00000072190
Protein Name Ubiquitin-specific peptidase 9, X-linked
Genbank Nucleotide ID AABR07037041
Gene Name Usp9x
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000003261.7 ENSRNOT00000080651.1 ENSRNOP00000072190.1
ENSRNOG00000003261.7 ENSRNOT00000048980.5 ENSRNOP00000043441.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFACRAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.40e-84 284.6 1557 1956
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP
   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle................kkkeklneenp............................. 42
           +GlkN g+tCYmNSv+Q+L++ip++r+ +l                 k         +                             
   Q: 1557 VGLKNAGATCYMNSVIQQLYMIPSIRNGILAiegtgsdvdddmsgdeK---------Qdnesnvdprddvfgypqqfedkpplskte 1634
           6******************************98888877766654431.........033333455677777777777777777777 PP
   S: 43   ..kepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedksels 127
             ke +  +l++lq +f +l  s+ +++ pr ++k+++ + e ++  eq+Da Ef++ l+d+l+e+l                    
   Q: 1635 drKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEAL-------------------- 1701
           7677777************************************************************.................... PP
   S: 128  deaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkk 214
                 k   ++ ++s++++g++ +q +c+ c ++++ ee+f++l++++++++     +l d+Le+++k + leg+n+y+cekc+kk
   Q: 1702 ------KALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQ-----NLLDSLEQYVKGDLLEGANAYHCEKCNKK 1777
           ......67999******************************************.....9**************************** PP
   S: 215  qeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts......................peekqkekkkYe 279
           ++++k+l +kklP+vL ++LkRf ++ e+++ +k+n+++efp+eLd++p+++                       +e++++ ++kY+
   Q: 1778 VDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAgvaklegdnvnpesqliqqneqSESEKAGSTKYR 1864
           *****************************************************99999999999888888776654444444***** PP
   S: 280  LiavvvHsGslssGHYvayvkn......ekgkWllfdDskVtevkeeevleetg...........................staYvl 333
           L++v+vHsG++s+GHY++y+ +      ek++W++fdD  Vte+k+++ +e+++                           ++aY+l
   Q: 1865 LVGVLVHSGQASGGHYYSYIIQrnggdgEKNRWYKFDDGDVTECKMDDDEEMKNqcfggeymgevfdhmmkrmsyrrqkrwWNAYIL 1951
           **********************6666655666*******************9999******************************** PP
   S: 334  fYkrr 338
           fY+r+
   Q: 1952 FYERM 1956
           ***96 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MTATTRGSPV GGNDNQGQAP DGQSQPPLQQ NQTSSPDSSN ENSPATPPDE QGQGDAPPQI 60
EDEEPAFPHT DLAKLDDMIN RPRWVVPVLP KGELEVLLEA AIDLSKKGLD VKSEACQRFF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105377|DUB,USP|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGGCGGCGCT GAGACTAGTG GGAGTCTGCG CTGCTGCCGC TGCTGCCGCT GCTGTCGCTG 60
TCGCTGCTGC CGCTGCCGCC GCCGACACTG CCACTGGCCG TGCGGGTTTT CTTTTTCTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105377|DUB,USP|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
Pfam

PF00443--UCH
Gene Ontology

GO:0005737--C:cytoplasm
GO:0030426--C:growth cone
GO:0016020--C:membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0048675--P:axon extension
GO:0030509--P:BMP signaling pathway
GO:0016477--P:cell migration
GO:0001764--P:neuron migration
GO:0016579--P:protein deubiquitination
GO:0007179--P:transforming growth factor beta receptor signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001640 Ailuropoda melanoleuca 98.55 0.00e+00 5001.00
IUUC-Apl-003592 Anas platyrhynchos 94.87 0.00e+00 4828.00
IUUC-Aca-004939 Anolis carolinensis 94.64 0.00e+00 4789.00
IUUC-Ame-011772 Astyanax mexicanus 87.75 0.00e+00 4533.00
IUUC-Bta-012775 Bos taurus 98.16 0.00e+00 4961.00
IUUC-Cja-019464 Callithrix jacchus 98.20 0.00e+00 4889.00
IUUC-Cfa-020569 Canis familiaris 98.27 0.00e+00 3223.00
IUUC-Csa-023405 Chlorocebus sabaeus 98.67 0.00e+00 4952.00
IUUC-Cho-024524 Choloepus hoffmanni 93.22 0.00e+00 797.00
IUUC-Cin-025551 Ciona intestinalis 63.75 4.00e-143 501.00
IUUC-Csv-025956 Ciona savignyi 53.78 0.00e+00 2502.00
IUUC-Dre-028329 Danio rerio 88.12 0.00e+00 4564.00
IUUC-Dno-028936 Dasypus novemcinctus 98.43 0.00e+00 5001.00
IUUC-Dor-030352 Dipodomys ordii 93.89 0.00e+00 2245.00
IUUC-Dme-032160 Drosophila melanogaster 47.88 0.00e+00 2168.00
IUUC-Ete-032287 Echinops telfairi 96.51 0.00e+00 2764.00
IUUC-Eca-033352 Equus caballus 97.28 0.00e+00 4984.00
IUUC-Eeu-034907 Erinaceus europaeus 86.61 0.00e+00 1837.00
IUUC-Fca-035458 Felis catus 97.86 0.00e+00 5022.00
IUUC-Fal-036924 Ficedula albicollis 94.70 0.00e+00 4732.00
IUUC-Gmo-039578 Gadus morhua 89.57 0.00e+00 4468.00
IUUC-Gga-040978 Gallus gallus 94.95 0.00e+00 4833.00
IUUC-Gac-041970 Gasterosteus aculeatus 90.30 0.00e+00 4564.00
IUUC-Ggo-045575 Gorilla gorilla 97.98 0.00e+00 4972.00
IUUC-Hsa-046295 Homo sapiens 98.05 0.00e+00 4978.00
IUUC-Itr-048768 Ictidomys tridecemlineatus 98.90 0.00e+00 5013.00
IUUC-Lch-050493 Latimeria chalumnae 92.15 0.00e+00 4630.00
IUUC-Loc-052667 Lepisosteus oculatus 89.61 0.00e+00 4670.00
IUUC-Laf-054094 Loxodonta africana 97.86 0.00e+00 4991.00
IUUC-Mcc-054861 Macaca mulatta 97.52 0.00e+00 4934.00
IUUC-Meu-056849 Macropus eugenii 82.72 0.00e+00 1411.00
IUUC-Mga-060159 Meleagris gallopavo 94.76 0.00e+00 4825.00
IUUC-Mmr-060732 Microcebus murinus 98.52 0.00e+00 5007.00
IUUC-Mdo-062274 Monodelphis domestica 95.06 0.00e+00 4898.00
IUUC-Mmu-064056 Mus musculus 99.65 0.00e+00 5052.00
IUUC-Mpu-066669 Mustela putorius furo 98.59 0.00e+00 5008.00
IUUC-Mlu-067516 Myotis lucifugus 97.69 0.00e+00 4960.00
IUUC-Nle-069664 Nomascus leucogenys 98.74 0.00e+00 3665.00
IUUC-Opr-070185 Ochotona princeps 87.76 0.00e+00 797.00
IUUC-Ont-072119 Oreochromis niloticus 89.50 0.00e+00 4576.00
IUUC-Oan-073154 Ornithorhynchus anatinus 94.64 0.00e+00 4875.00
IUUC-Ocu-074485 Oryctolagus cuniculus 98.37 0.00e+00 5048.00
IUUC-Ola-086350 Oryzias latipes 89.95 0.00e+00 4495.00
IUUC-Oga-088328 Otolemur garnettii 97.55 0.00e+00 5045.00
IUUC-Oar-090098 Ovis aries 97.47 0.00e+00 4984.00
IUUC-Pan-091741 Papio anubis 98.58 0.00e+00 3792.00
IUUC-Psi-093040 Pelodiscus sinensis 94.80 0.00e+00 4816.00
IUUC-Pfo-096871 Poecilia formosa 88.79 0.00e+00 4560.00
IUUC-Pab-098374 Pongo abelii 98.63 0.00e+00 4948.00
IUUC-Pca-100801 Procavia capensis 89.08 0.00e+00 2417.00
IUUC-Pva-102992 Pteropus vampyrus 92.42 0.00e+00 2416.00
IUUC-Sha-106648 Sarcophilus harrisii 92.41 0.00e+00 4717.00
IUUC-Smo-108879 Selaginella moellendorffii 28.10 0.00e+00 810.00
IUUC-Sar-113729 Sorex araneus 94.27 0.00e+00 3143.00
IUUC-Ssc-116261 Sus scrofa 92.03 0.00e+00 4778.00
IUUC-Tgu-117126 Taeniopygia guttata 94.91 0.00e+00 4831.00
IUUC-Tru-117676 Takifugu rubripes 89.93 0.00e+00 4566.00
IUUC-Tsy-119209 Tarsius syrichta 86.69 0.00e+00 2676.00
IUUC-Tni-120207 Tetraodon nigroviridis 85.29 0.00e+00 2040.00
IUUC-Tbe-128033 Tupaia belangeri 98.80 0.00e+00 1058.00
IUUC-Ttr-128742 Tursiops truncatus 96.63 0.00e+00 4919.00
IUUC-Vpa-130581 Vicugna pacos 94.68 0.00e+00 4778.00
IUUC-Xtr-132145 Xenopus tropicalis 92.49 0.00e+00 4747.00
Created Date 25-Jun-2017

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