iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132136

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

THO complex 3

Genbank Nucleotide ID

AAMC01076520

Gene Name

thoc3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000022316.3	ENSXETT00000048296.3	ENSXETP00000048296.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.60e-28	95.3	68	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvll 36
           gH dsv  l++   + +l+v++s+D+ti++WD+r  +++
   Q: 68   GHGDSVDQLCWhpyNPDLFVTASGDKTIRIWDVRNEKCI 106
           8***********86339*****************99997 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

LSTMSVQEIQ EHFKTNNKTR EFSAHSAKVH SVAWSCDGRR LASGSFDKTA SVFVLEKDRL 60
TKENNYRGHG DSVDQLCWHP YNPDLFVTAS GDKTIRIWDV RNEKCISTIS TKGENINICW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAAGTACCA TGTCTGTGCA GGAGATACAG GAGCATTTCA AAACCAATAA TAAGACCCGA 60
GAGTTCTCGG CGCACAGTGC AAAGGTTCAT TCGGTGGCTT GGAGCTGTGA TGGGAGGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000445--C:THO complex part of transcription export complex
GO:0006406--P:mRNA export from nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	48.25	2.00e-81	295.00
IUUC-Aml-001264	Ailuropoda melanoleuca	88.12	7.00e-170	589.00
IUUC-Atr-003050	Amborella trichopoda	49.05	8.00e-90	323.00
IUUC-Apl-003426	Anas platyrhynchos	77.44	6.00e-118	416.00
IUUC-Aca-004931	Anolis carolinensis	88.74	1.00e-115	408.00
IUUC-Aly-006237	Arabidopsis lyrata	49.50	1.00e-90	326.00
IUUC-Ath-007581	Arabidopsis thaliana	49.50	4.00e-91	327.00
IUUC-Acl-008253	Aspergillus clavatus	28.86	4.00e-40	158.00
IUUC-Afl-008519	Aspergillus flavus	32.87	1.00e-42	166.00
IUUC-Afu-008886	Aspergillus fumigatus	27.51	8.00e-38	150.00
IUUC-Ani-009275	Aspergillus nidulans	31.15	6.00e-42	164.00
IUUC-Ang-009862	Aspergillus niger	30.88	1.00e-41	163.00
IUUC-Ate-010247	Aspergillus terreus	29.68	6.00e-40	157.00
IUUC-Ame-010828	Astyanax mexicanus	87.58	3.00e-171	593.00
IUUC-Bgr-012163	Blumeria graminis	28.68	6.00e-36	144.00
IUUC-Bta-013514	Bos taurus	76.25	5.00e-146	510.00
IUUC-Bci-013639	Botrytis cinerea	32.18	3.00e-47	181.00
IUUC-Bdi-015049	Brachypodium distachyon	46.33	2.00e-80	292.00
IUUC-Bol-015401	Brassica oleracea	49.20	2.00e-87	315.00
IUUC-Bra-017867	Brassica rapa	49.20	2.00e-87	315.00
IUUC-Cel-018699	Caenorhabditis elegans	34.27	4.00e-47	181.00
IUUC-Cja-019591	Callithrix jacchus	88.33	2.00e-169	587.00
IUUC-Cfa-020692	Canis familiaris	88.12	3.00e-170	590.00
IUUC-Cpo-022135	Cavia porcellus	76.80	6.00e-142	496.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	35.55	5.00e-43	167.00
IUUC-Csa-023408	Chlorocebus sabaeus	88.64	8.00e-170	589.00
IUUC-Cho-024340	Choloepus hoffmanni	82.61	2.00e-94	337.00
IUUC-Cin-025418	Ciona intestinalis	72.46	2.00e-54	204.00
IUUC-Csv-026130	Ciona savignyi	68.65	1.00e-132	465.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	31.36	6.00e-46	177.00
IUUC-Dre-028634	Danio rerio	86.65	4.00e-170	590.00
IUUC-Dno-029449	Dasypus novemcinctus	88.64	5.00e-170	589.00
IUUC-Dor-030301	Dipodomys ordii	72.24	3.00e-106	377.00
IUUC-Dse-031341	Dothistroma septosporum	28.08	8.00e-33	134.00
IUUC-Dme-031674	Drosophila melanogaster	62.97	4.00e-123	434.00
IUUC-Ete-033136	Echinops telfairi	88.22	3.00e-168	583.00
IUUC-Eca-034432	Equus caballus	80.00	3.00e-153	533.00
IUUC-Fca-035694	Felis catus	88.12	3.00e-170	590.00
IUUC-Fal-037328	Ficedula albicollis	88.64	7.00e-170	589.00
IUUC-Fox-037894	Fusarium oxysporum	31.10	6.00e-46	177.00
IUUC-Fso-038266	Fusarium solani	30.10	3.00e-43	169.00
IUUC-Gmo-039617	Gadus morhua	85.40	6.00e-169	586.00
IUUC-Ggr-039819	Gaeumannomyces graminis	29.62	4.00e-39	154.00
IUUC-Gga-041164	Gallus gallus	88.54	6.00e-168	583.00
IUUC-Gac-042407	Gasterosteus aculeatus	86.65	4.00e-171	593.00
IUUC-Gma-043663	Glycine max	49.84	1.00e-91	329.00
IUUC-Ggo-044989	Gorilla gorilla	89.17	1.00e-169	588.00
IUUC-Hsa-046784	Homo sapiens	88.64	7.00e-170	589.00
IUUC-Hvu-047633	Hordeum vulgare	45.83	1.00e-55	209.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	66.46	1.00e-115	409.00
IUUC-Kpa-049182	Komagataella pastoris	25.78	9.00e-18	84.30
IUUC-Lch-049894	Latimeria chalumnae	89.44	2.00e-174	604.00
IUUC-Lpe-051061	Leersia perrieri	40.39	5.00e-60	224.00
IUUC-Loc-052424	Lepisosteus oculatus	87.89	2.00e-172	597.00
IUUC-Lma-053127	Leptosphaeria maculans	32.86	1.00e-48	188.00
IUUC-Laf-053396	Loxodonta africana	88.33	3.00e-169	587.00
IUUC-Mcc-055517	Macaca mulatta	88.64	8.00e-170	589.00
IUUC-Meu-056034	Macropus eugenii	88.64	3.00e-170	590.00
IUUC-Mor-057011	Magnaporthe oryzae	26.00	2.00e-27	116.00
IUUC-Mpo-057490	Magnaporthe poae	28.34	4.00e-39	155.00
IUUC-Mtr-057927	Medicago truncatula	49.05	6.00e-91	327.00
IUUC-Mla-058945	Melampsora laricipopulina	35.25	9.00e-48	183.00
IUUC-Mga-060155	Meleagris gallopavo	88.49	4.00e-132	463.00
IUUC-Mvi-060344	Microbotryum violaceum	36.57	1.00e-52	200.00
IUUC-Mmr-060834	Microcebus murinus	88.64	3.00e-170	590.00
IUUC-Mdo-062587	Monodelphis domestica	88.64	3.00e-170	590.00
IUUC-Mmu-063395	Mus musculus	88.64	6.00e-170	589.00
IUUC-Mac-064579	Musa acuminata	48.51	7.00e-89	320.00
IUUC-Mpu-066688	Mustela putorius furo	89.14	1.00e-143	502.00
IUUC-Mlu-067299	Myotis lucifugus	88.44	1.00e-170	592.00
IUUC-Nfi-068562	Neosartorya fischeri	29.33	3.00e-39	155.00
IUUC-Ncr-068654	Neurospora crassa	28.37	1.00e-38	153.00
IUUC-Nle-069736	Nomascus leucogenys	87.70	2.00e-167	581.00
IUUC-Ont-071763	Oreochromis niloticus	87.58	1.00e-171	595.00
IUUC-Ocu-074909	Oryctolagus cuniculus	88.64	8.00e-170	589.00
IUUC-Oba-075902	Oryza barthii	40.39	1.00e-60	226.00
IUUC-Obr-076613	Oryza brachyantha	46.91	1.00e-79	289.00
IUUC-Ogl-077009	Oryza glaberrima	46.45	2.00e-78	285.00
IUUC-Ogu-078344	Oryza glumaepatula	40.39	1.00e-60	226.00
IUUC-Oin-079773	Oryza indica	46.45	2.00e-78	285.00
IUUC-Olo-080474	Oryza longistaminata	43.52	2.00e-44	171.00
IUUC-Ome-081837	Oryza meridionalis	42.86	2.00e-31	128.00
IUUC-Oni-082263	Oryza nivara	40.39	1.00e-60	226.00
IUUC-Opu-083813	Oryza punctata	46.45	2.00e-78	285.00
IUUC-Oru-084610	Oryza rufipogon	40.39	1.00e-60	226.00
IUUC-Osa-085415	Oryza sativa	46.45	2.00e-78	285.00
IUUC-Ola-086659	Oryzias latipes	87.27	2.00e-171	594.00
IUUC-Olu-087649	Ostreococcus lucimarinus	37.50	5.00e-55	207.00
IUUC-Oga-087923	Otolemur garnettii	88.64	5.00e-170	589.00
IUUC-Oar-089688	Ovis aries	85.00	2.00e-164	571.00
IUUC-Ptr-091628	Pan troglodytes	88.64	7.00e-170	589.00
IUUC-Pan-092586	Papio anubis	87.81	3.00e-168	583.00
IUUC-Psi-093701	Pelodiscus sinensis	87.80	2.00e-106	377.00
IUUC-Pma-094465	Petromyzon marinus	83.76	2.00e-163	567.00
IUUC-Pno-094767	Phaeosphaeria nodorum	33.21	1.00e-48	187.00
IUUC-Ppa-095195	Physcomitrella patens	51.95	4.00e-94	337.00
IUUC-Pfo-097383	Poecilia formosa	86.96	8.00e-172	595.00
IUUC-Pab-098669	Pongo abelii	88.64	5.00e-170	589.00
IUUC-Pop-099409	Populus trichocarpa	50.00	5.00e-90	323.00
IUUC-Pca-100769	Procavia capensis	77.29	3.00e-140	491.00
IUUC-Ppe-101321	Prunus persica	49.06	1.00e-89	322.00
IUUC-Pva-102759	Pteropus vampyrus	87.81	2.00e-169	587.00
IUUC-Pgr-103535	Puccinia graminis	35.83	4.00e-53	201.00
IUUC-Ptt-103820	Puccinia triticina	35.83	5.00e-53	201.00
IUUC-Pte-104271	Pyrenophora teres	32.01	5.00e-46	177.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	30.86	1.00e-38	154.00
IUUC-Rno-106126	Rattus norvegicus	88.64	6.00e-170	589.00
IUUC-Sha-107146	Sarcophilus harrisii	88.54	4.00e-168	583.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	36.43	3.00e-53	201.00
IUUC-Spo-108324	Schizosaccharomyces pombe	41.76	3.00e-59	221.00
IUUC-Smo-108990	Selaginella moellendorffii	50.16	5.00e-91	327.00
IUUC-Sit-110773	Setaria italica	48.68	4.00e-80	291.00
IUUC-Sly-111619	Solanum lycopersicum	49.67	1.00e-90	326.00
IUUC-Stu-112241	Solanum tuberosum	50.00	2.00e-91	328.00
IUUC-Sbi-114842	Sorghum bicolor	49.34	2.00e-81	295.00
IUUC-Sre-115070	Sporisorium reilianum	34.63	2.00e-53	202.00
IUUC-Ssc-115581	Sus scrofa	88.12	3.00e-170	590.00
IUUC-Tgu-117354	Taeniopygia guttata	88.10	2.00e-164	571.00
IUUC-Tru-117745	Takifugu rubripes	85.71	3.00e-168	583.00
IUUC-Tni-120050	Tetraodon nigroviridis	84.78	4.00e-166	576.00
IUUC-Tca-121279	Theobroma cacao	51.31	1.00e-91	329.00
IUUC-Tre-121952	Trichoderma reesei	29.97	7.00e-46	177.00
IUUC-Tvi-122581	Trichoderma virens	29.62	2.00e-45	176.00
IUUC-Tae-124204	Triticum aestivum	48.25	2.00e-81	295.00
IUUC-Tur-126279	Triticum urartu	46.49	1.00e-80	293.00
IUUC-Tme-127000	Tuber melanosporum	27.93	1.00e-39	156.00
IUUC-Ttr-128405	Tursiops truncatus	90.08	2.00e-142	498.00
IUUC-Uma-129547	Ustilago maydis	35.80	3.00e-52	198.00
IUUC-Vda-129689	Verticillium dahliae	29.89	1.00e-38	153.00
IUUC-Vvi-131345	Vitis vinifera	49.68	3.00e-91	328.00
IUUC-Xma-133767	Xiphophorus maculatus	86.96	2.00e-171	594.00
IUUC-Yli-134522	Yarrowia lipolytica	25.88	1.00e-28	120.00
IUUC-Zma-135816	Zea mays	48.68	4.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence