iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028752

Ensembl Protein ID

ENSDARP00000099718.3

UniProt Accession

E7F296; E9QH75; E7F296_DANRE

Genbank Protein ID

ENSDARP00000099718

Protein Name

WD repeat and HMG-box DNA-binding protein 1

Genbank Nucleotide ID

CU464134

Gene Name

wdhd1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000015998.10	ENSDART00000133710.3	ENSDARP00000113096.2
ENSDARG00000015998.10	ENSDART00000138764.2	ENSDARP00000115064.1
ENSDARG00000015998.10	ENSDART00000110507.3	ENSDARP00000099718.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-11	45.1	134	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH ++v ++a+  sd +l+s+s Dg++ vW++ ++++
   Q: 134  GHDAPVLSVALdpSDEFLASSSCDGSVAVWSIESQTQ 170
           8***********777****************988766 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MPCERKPMRY GHSEGHTDVC FDDQGKCIVT CGSDGDVRIW ESLDDDDPKS INVGEKVYSV 60
ALKNGKLVTA VSNNTVQIHT FPDGEPDGIL TRFTTNANHV TFNNSGSRVA AGSSDFLVKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCGCGGGAG ATGTGAGCGA GAGGGCGAAG AGTGCTGAGA ATTACCGCCA AACTAAAGCT 60
GTAAGTACTT TGTTTTGAAA CATGCATACA ACATATATCG ACGTAATCAT ATTCGGTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR009071--HMG_box_dom
IPR022100--Mcl1_mid
IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50118--HMG_BOX_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A
PF00505--HMG_box
PF12341--Mcl1_mid
PF00400--WD40

SMART

SM00398--HMG
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000357	Aegilops tauschii	29.80	1.00e-48	188.00
IUUC-Aml-001369	Ailuropoda melanoleuca	66.30	0.00e+00	1153.00
IUUC-Atr-002987	Amborella trichopoda	34.09	1.00e-31	131.00
IUUC-Apl-003331	Anas platyrhynchos	58.42	0.00e+00	1278.00
IUUC-Aca-004285	Anolis carolinensis	58.53	0.00e+00	1221.00
IUUC-Aly-005907	Arabidopsis lyrata	29.51	4.00e-30	127.00
IUUC-Ath-007037	Arabidopsis thaliana	28.84	4.00e-64	240.00
IUUC-Acl-008185	Aspergillus clavatus	25.68	9.00e-30	125.00
IUUC-Afl-008630	Aspergillus flavus	23.00	9.00e-56	212.00
IUUC-Afu-008921	Aspergillus fumigatus	26.28	2.00e-34	141.00
IUUC-Ani-009243	Aspergillus nidulans	21.93	2.00e-22	101.00
IUUC-Ang-009860	Aspergillus niger	26.33	3.00e-34	140.00
IUUC-Aor-010029	Aspergillus oryzae	23.00	9.00e-56	212.00
IUUC-Ate-010570	Aspergillus terreus	25.97	1.00e-34	141.00
IUUC-Bgr-012205	Blumeria graminis	25.24	3.00e-34	140.00
IUUC-Bta-012495	Bos taurus	58.11	0.00e+00	1246.00
IUUC-Bci-013848	Botrytis cinerea	24.92	2.00e-23	104.00
IUUC-Bdi-014162	Brachypodium distachyon	31.03	1.00e-27	118.00
IUUC-Bol-015828	Brassica oleracea	26.63	3.00e-32	134.00
IUUC-Bra-016792	Brassica rapa	31.65	9.00e-31	129.00
IUUC-Cja-018995	Callithrix jacchus	57.83	0.00e+00	1271.00
IUUC-Cfa-020713	Canis familiaris	56.15	0.00e+00	1099.00
IUUC-Cpo-021596	Cavia porcellus	56.43	0.00e+00	1155.00
IUUC-Cre-022785	Chlamydomonas reinhardtii	27.40	8.00e-21	96.70
IUUC-Csa-024080	Chlorocebus sabaeus	57.93	0.00e+00	1217.00
IUUC-Cho-024295	Choloepus hoffmanni	53.24	2.00e-120	426.00
IUUC-Cin-025123	Ciona intestinalis	48.83	2.00e-116	413.00
IUUC-Csv-025859	Ciona savignyi	45.71	3.00e-108	387.00
IUUC-Cgl-026546	Colletotrichum gloeosporioides	24.83	2.00e-30	127.00
IUUC-Cne-026873	Cryptococcus neoformans	28.54	2.00e-45	178.00
IUUC-Dno-029844	Dasypus novemcinctus	61.02	0.00e+00	1057.00
IUUC-Dse-031515	Dothistroma septosporum	25.83	1.00e-56	215.00
IUUC-Dme-031614	Drosophila melanogaster	35.32	1.00e-62	235.00
IUUC-Ete-032291	Echinops telfairi	74.81	2.00e-125	443.00
IUUC-Eca-033665	Equus caballus	59.02	0.00e+00	1285.00
IUUC-Eeu-035036	Erinaceus europaeus	46.25	0.00e+00	629.00
IUUC-Fca-036209	Felis catus	66.05	0.00e+00	1134.00
IUUC-Fal-037229	Ficedula albicollis	58.03	0.00e+00	822.00
IUUC-Fox-037686	Fusarium oxysporum	27.21	3.00e-28	119.00
IUUC-Fso-038120	Fusarium solani	25.45	1.00e-31	131.00
IUUC-Gmo-039627	Gadus morhua	70.79	0.00e+00	689.00
IUUC-Ggr-040058	Gaeumannomyces graminis	27.60	7.00e-28	119.00
IUUC-Gga-040825	Gallus gallus	58.38	0.00e+00	1259.00
IUUC-Gac-042000	Gasterosteus aculeatus	57.52	0.00e+00	1166.00
IUUC-Gma-044023	Glycine max	33.47	8.00e-33	136.00
IUUC-Ggo-044531	Gorilla gorilla	58.25	0.00e+00	1284.00
IUUC-Hsa-046362	Homo sapiens	58.34	0.00e+00	1276.00
IUUC-Hvu-047719	Hordeum vulgare	29.56	2.00e-47	184.00
IUUC-Itr-048089	Ictidomys tridecemlineatus	58.84	4.00e-148	518.00
IUUC-Lch-050106	Latimeria chalumnae	65.19	0.00e+00	1107.00
IUUC-Lpe-050996	Leersia perrieri	32.33	2.00e-30	128.00
IUUC-Loc-051766	Lepisosteus oculatus	68.83	0.00e+00	1477.00
IUUC-Lma-053144	Leptosphaeria maculans	27.69	2.00e-22	101.00
IUUC-Laf-054285	Loxodonta africana	58.46	0.00e+00	1243.00
IUUC-Mcc-054702	Macaca mulatta	58.27	0.00e+00	1273.00
IUUC-Meu-056634	Macropus eugenii	51.95	4.00e-145	509.00
IUUC-Mor-057040	Magnaporthe oryzae	26.03	5.00e-29	123.00
IUUC-Mpo-057395	Magnaporthe poae	28.43	8.00e-29	122.00
IUUC-Mtr-057830	Medicago truncatula	27.71	3.00e-75	276.00
IUUC-Mla-059152	Melampsora laricipopulina	25.39	8.00e-30	126.00
IUUC-Mga-059492	Meleagris gallopavo	57.63	0.00e+00	1268.00
IUUC-Mvi-060303	Microbotryum violaceum	27.54	6.00e-41	163.00
IUUC-Mmr-061066	Microcebus murinus	57.95	0.00e+00	1271.00
IUUC-Mdo-062039	Monodelphis domestica	58.17	0.00e+00	1274.00
IUUC-Mmu-063620	Mus musculus	56.87	0.00e+00	1211.00
IUUC-Mac-065638	Musa acuminata	30.58	1.00e-47	185.00
IUUC-Mpu-066212	Mustela putorius furo	56.45	0.00e+00	1233.00
IUUC-Mlu-068167	Myotis lucifugus	60.16	0.00e+00	1254.00
IUUC-Nfi-068338	Neosartorya fischeri	26.28	3.00e-34	140.00
IUUC-Ncr-068798	Neurospora crassa	27.57	1.00e-26	115.00
IUUC-Nle-069987	Nomascus leucogenys	58.12	0.00e+00	1272.00
IUUC-Opr-070369	Ochotona princeps	67.05	1.00e-110	394.00
IUUC-Ont-072317	Oreochromis niloticus	70.16	0.00e+00	1463.00
IUUC-Oan-073516	Ornithorhynchus anatinus	73.41	6.00e-121	426.00
IUUC-Ocu-074529	Oryctolagus cuniculus	58.18	0.00e+00	1280.00
IUUC-Oba-075044	Oryza barthii	27.05	4.00e-37	150.00
IUUC-Obr-076499	Oryza brachyantha	29.74	1.00e-27	119.00
IUUC-Ogl-077757	Oryza glaberrima	27.05	2.00e-37	151.00
IUUC-Ogu-078878	Oryza glumaepatula	27.30	1.00e-37	152.00
IUUC-Oin-079900	Oryza indica	27.30	7.00e-38	152.00
IUUC-Olo-080741	Oryza longistaminata	27.25	2.00e-37	151.00
IUUC-Ome-081734	Oryza meridionalis	27.30	3.00e-37	150.00
IUUC-Oni-082656	Oryza nivara	27.30	1.00e-37	152.00
IUUC-Opu-083312	Oryza punctata	27.30	5.00e-37	150.00
IUUC-Oru-084507	Oryza rufipogon	27.25	4.00e-37	150.00
IUUC-Osa-085329	Oryza sativa	27.30	4.00e-38	153.00
IUUC-Ola-086433	Oryzias latipes	73.20	0.00e+00	1209.00
IUUC-Olu-087690	Ostreococcus lucimarinus	27.53	4.00e-40	159.00
IUUC-Oga-088410	Otolemur garnettii	65.36	0.00e+00	1087.00
IUUC-Oar-089993	Ovis aries	59.16	0.00e+00	1253.00
IUUC-Ptr-091145	Pan troglodytes	58.27	0.00e+00	1297.00
IUUC-Pan-092500	Papio anubis	58.36	0.00e+00	1268.00
IUUC-Psi-093984	Pelodiscus sinensis	59.80	0.00e+00	1315.00
IUUC-Pma-094567	Petromyzon marinus	56.04	6.00e-96	345.00
IUUC-Pno-095002	Phaeosphaeria nodorum	25.41	1.00e-40	161.00
IUUC-Pfo-097387	Poecilia formosa	67.26	0.00e+00	1226.00
IUUC-Pab-097803	Pongo abelii	57.94	0.00e+00	1249.00
IUUC-Pop-099165	Populus trichocarpa	32.03	6.00e-41	163.00
IUUC-Pca-100989	Procavia capensis	76.52	6.00e-111	395.00
IUUC-Ppe-102022	Prunus persica	30.12	4.00e-43	170.00
IUUC-Pva-102389	Pteropus vampyrus	53.82	0.00e+00	1134.00
IUUC-Pgr-103635	Puccinia graminis	26.63	2.00e-32	134.00
IUUC-Pte-104320	Pyrenophora teres	25.39	7.00e-47	182.00
IUUC-Pyt-104622	Pyrenophora triticirepentis	25.50	6.00e-45	176.00
IUUC-Rno-105689	Rattus norvegicus	56.57	0.00e+00	1207.00
IUUC-Sha-107448	Sarcophilus harrisii	56.63	0.00e+00	1217.00
IUUC-Sja-107702	Schizosaccharomyces japonicus	25.77	7.00e-25	109.00
IUUC-Spo-108360	Schizosaccharomyces pombe	26.33	8.00e-25	109.00
IUUC-Ssl-108529	Sclerotinia sclerotiorum	24.58	2.00e-22	101.00
IUUC-Smo-109178	Selaginella moellendorffii	30.88	5.00e-40	159.00
IUUC-Sit-110790	Setaria italica	28.04	1.00e-38	155.00
IUUC-Sly-111470	Solanum lycopersicum	31.96	3.00e-34	140.00
IUUC-Stu-111945	Solanum tuberosum	31.96	9.00e-34	139.00
IUUC-Sar-113075	Sorex araneus	48.57	0.00e+00	835.00
IUUC-Sbi-114822	Sorghum bicolor	28.24	4.00e-65	243.00
IUUC-Sre-114913	Sporisorium reilianum	27.44	6.00e-19	90.10
IUUC-Ssc-116073	Sus scrofa	57.93	0.00e+00	1089.00
IUUC-Tgu-117253	Taeniopygia guttata	64.50	0.00e+00	1122.00
IUUC-Tru-117741	Takifugu rubripes	69.04	0.00e+00	1428.00
IUUC-Tsy-118834	Tarsius syrichta	70.54	2.00e-166	580.00
IUUC-Tni-120726	Tetraodon nigroviridis	67.08	0.00e+00	1419.00
IUUC-Tca-121655	Theobroma cacao	35.65	3.00e-34	140.00
IUUC-Tre-121921	Trichoderma reesei	26.59	3.00e-31	130.00
IUUC-Tvi-122540	Trichoderma virens	25.51	4.00e-29	124.00
IUUC-Tae-123766	Triticum aestivum	29.80	2.00e-48	187.00
IUUC-Tur-126398	Triticum urartu	28.48	5.00e-69	256.00
IUUC-Tme-127075	Tuber melanosporum	25.23	4.00e-28	120.00
IUUC-Tbe-128002	Tupaia belangeri	64.45	1.00e-121	431.00
IUUC-Ttr-129101	Tursiops truncatus	59.94	0.00e+00	1199.00
IUUC-Uma-129374	Ustilago maydis	24.03	3.00e-25	111.00
IUUC-Vda-129719	Verticillium dahliae	26.97	2.00e-27	118.00
IUUC-Vpa-130039	Vicugna pacos	66.50	0.00e+00	1133.00
IUUC-Vvi-131442	Vitis vinifera	30.51	3.00e-25	110.00
IUUC-Xtr-132599	Xenopus tropicalis	57.47	0.00e+00	1273.00
IUUC-Xma-132991	Xiphophorus maculatus	69.62	0.00e+00	1467.00
IUUC-Zma-135846	Zea mays	27.25	3.00e-68	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence