iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091199

Ensembl Protein ID

ENSPTRP00000056131.1

UniProt Accession

H2RBQ9; H2RBQ9_PANTR

Genbank Protein ID

ENSPTRP00000056131

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03089395

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000004507.6	ENSPTRT00000064569.1	ENSPTRP00000056131.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.10e-18	66.2	295	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC +Cg+g +++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 295  VCMFCGRGNNED-KLLLCDGCDDSYHTFCLIPP-LPDVPKGD-WRCPKCVA 342
           8*********88.6*******************.*******7.******75 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAGVGPGGYA AEFVPPPECP VFEPSWEEFT DPLSFIGRIR PLAEKTGICK IRPPKDWQPP 60
FACEVKSFRF TPRVQRLNEL EAMTRVRLDF LDQLAKFWEL QGSTLKIPVV ERKILDLYAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAAAAGTC CTGAACCTCA GAGGAAAAGC CTTGCAAGAA ACAATAACAA ACGGGAGGAG 60
GAAGCGATTC TGGGGTTTCT GTGTTGAACG GTTCTTGTCC GCGAAGATGC GCTTCGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0019907--C:cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032993--C:protein-DNA complex
GO:0031490--F:chromatin DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0032922--P:circadian regulation of gene expression
GO:0034720--P:histone H3-K4 demethylation
GO:1901726--P:negative regulation of histone deacetylase activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	98.05	0.00e+00	2964.00
IUUC-Atr-002595	Amborella trichopoda	30.76	2.00e-125	444.00
IUUC-Apl-004141	Anas platyrhynchos	92.00	0.00e+00	2807.00
IUUC-Aca-004952	Anolis carolinensis	90.01	0.00e+00	2810.00
IUUC-Acl-008162	Aspergillus clavatus	31.71	6.00e-122	432.00
IUUC-Afu-008796	Aspergillus fumigatus	30.69	8.00e-119	422.00
IUUC-Ani-009139	Aspergillus nidulans	29.68	6.00e-114	406.00
IUUC-Ate-010453	Aspergillus terreus	29.54	1.00e-117	418.00
IUUC-Ame-011323	Astyanax mexicanus	77.12	0.00e+00	2087.00
IUUC-Bgr-012241	Blumeria graminis	30.14	3.00e-114	407.00
IUUC-Bta-012902	Bos taurus	97.11	0.00e+00	2988.00
IUUC-Bci-013992	Botrytis cinerea	32.92	5.00e-106	380.00
IUUC-Bdi-014050	Brachypodium distachyon	29.84	2.00e-119	424.00
IUUC-Cja-018988	Callithrix jacchus	96.31	0.00e+00	2787.00
IUUC-Cfa-020212	Canis familiaris	97.04	0.00e+00	2925.00
IUUC-Cpo-022221	Cavia porcellus	97.09	0.00e+00	2073.00
IUUC-Csa-023575	Chlorocebus sabaeus	98.95	0.00e+00	2897.00
IUUC-Cho-024280	Choloepus hoffmanni	92.66	0.00e+00	2722.00
IUUC-Cin-025321	Ciona intestinalis	49.10	0.00e+00	1083.00
IUUC-Csv-026185	Ciona savignyi	48.34	0.00e+00	1177.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	28.56	1.00e-111	399.00
IUUC-Dre-027909	Danio rerio	76.99	0.00e+00	1656.00
IUUC-Dno-029473	Dasypus novemcinctus	97.40	0.00e+00	2698.00
IUUC-Dor-030281	Dipodomys ordii	93.97	0.00e+00	1214.00
IUUC-Dse-031479	Dothistroma septosporum	28.05	5.00e-114	406.00
IUUC-Dme-032021	Drosophila melanogaster	47.24	0.00e+00	1125.00
IUUC-Eca-034265	Equus caballus	96.28	0.00e+00	2950.00
IUUC-Fca-035476	Felis catus	97.04	0.00e+00	2961.00
IUUC-Fal-037078	Ficedula albicollis	92.07	0.00e+00	2504.00
IUUC-Fox-037694	Fusarium oxysporum	32.57	1.00e-97	352.00
IUUC-Fso-038127	Fusarium solani	29.64	5.00e-112	399.00
IUUC-Ggr-039929	Gaeumannomyces graminis	30.29	9.00e-110	392.00
IUUC-Gga-040466	Gallus gallus	90.74	0.00e+00	2888.00
IUUC-Gac-042566	Gasterosteus aculeatus	76.26	0.00e+00	2133.00
IUUC-Ggo-044524	Gorilla gorilla	92.42	0.00e+00	2542.00
IUUC-Hsa-045821	Homo sapiens	99.17	0.00e+00	3016.00
IUUC-Kpa-049245	Komagataella pastoris	22.43	4.00e-48	187.00
IUUC-Lch-050630	Latimeria chalumnae	74.90	0.00e+00	2137.00
IUUC-Loc-051963	Lepisosteus oculatus	76.92	0.00e+00	2076.00
IUUC-Laf-053918	Loxodonta africana	91.63	0.00e+00	2590.00
IUUC-Mcc-055672	Macaca mulatta	97.55	0.00e+00	2994.00
IUUC-Mor-057198	Magnaporthe oryzae	30.76	4.00e-120	426.00
IUUC-Mpo-057317	Magnaporthe poae	29.72	8.00e-111	395.00
IUUC-Mtr-058113	Medicago truncatula	31.84	2.00e-95	344.00
IUUC-Mga-059192	Meleagris gallopavo	82.51	0.00e+00	2430.00
IUUC-Mmr-060968	Microcebus murinus	95.91	0.00e+00	2980.00
IUUC-Mdo-062945	Monodelphis domestica	95.20	0.00e+00	2794.00
IUUC-Mmu-063614	Mus musculus	96.15	0.00e+00	2935.00
IUUC-Mpu-066349	Mustela putorius furo	97.92	0.00e+00	2868.00
IUUC-Mlu-067363	Myotis lucifugus	97.51	0.00e+00	3021.00
IUUC-Nle-070142	Nomascus leucogenys	98.99	0.00e+00	3014.00
IUUC-Opr-071002	Ochotona princeps	90.53	0.00e+00	1397.00
IUUC-Ont-072471	Oreochromis niloticus	78.84	0.00e+00	1901.00
IUUC-Oan-072797	Ornithorhynchus anatinus	79.94	0.00e+00	2032.00
IUUC-Ocu-074164	Oryctolagus cuniculus	96.51	0.00e+00	3014.00
IUUC-Oba-075388	Oryza barthii	27.95	4.00e-83	303.00
IUUC-Obr-076296	Oryza brachyantha	34.43	5.00e-97	350.00
IUUC-Ogu-079040	Oryza glumaepatula	28.00	2.00e-83	305.00
IUUC-Ome-081764	Oryza meridionalis	29.82	2.00e-101	365.00
IUUC-Oni-083012	Oryza nivara	27.91	1.00e-82	301.00
IUUC-Opu-083164	Oryza punctata	28.84	1.00e-93	338.00
IUUC-Oru-084630	Oryza rufipogon	27.79	3.00e-82	301.00
IUUC-Ola-087076	Oryzias latipes	75.68	0.00e+00	2118.00
IUUC-Oga-088350	Otolemur garnettii	95.50	0.00e+00	2884.00
IUUC-Oar-090045	Ovis aries	96.98	0.00e+00	2972.00
IUUC-Pan-092094	Papio anubis	95.54	0.00e+00	2743.00
IUUC-Psi-093550	Pelodiscus sinensis	91.77	0.00e+00	2607.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.38	6.00e-119	422.00
IUUC-Ppa-095839	Physcomitrella patens	35.20	5.00e-16	81.30
IUUC-Pfo-097266	Poecilia formosa	75.64	0.00e+00	2128.00
IUUC-Pab-098576	Pongo abelii	99.11	0.00e+00	3009.00
IUUC-Pca-100123	Procavia capensis	95.04	0.00e+00	1657.00
IUUC-Ppe-101504	Prunus persica	32.29	3.00e-102	367.00
IUUC-Pva-103109	Pteropus vampyrus	91.72	0.00e+00	2800.00
IUUC-Pgr-103434	Puccinia graminis	28.15	5.00e-38	151.00
IUUC-Pte-104195	Pyrenophora teres	30.10	2.00e-122	434.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	30.20	1.00e-124	441.00
IUUC-Rno-105664	Rattus norvegicus	96.15	0.00e+00	2933.00
IUUC-Sha-107506	Sarcophilus harrisii	93.27	0.00e+00	2539.00
IUUC-Sja-107734	Schizosaccharomyces japonicus	21.13	2.00e-35	144.00
IUUC-Spo-108283	Schizosaccharomyces pombe	23.24	1.00e-52	202.00
IUUC-Smo-108843	Selaginella moellendorffii	52.08	9.00e-11	62.40
IUUC-Sit-110534	Setaria italica	29.71	4.00e-122	433.00
IUUC-Sar-113052	Sorex araneus	96.45	0.00e+00	2953.00
IUUC-Sbi-114173	Sorghum bicolor	58.14	8.00e-12	64.30
IUUC-Sre-115161	Sporisorium reilianum	30.31	8.00e-132	466.00
IUUC-Tgu-116613	Taeniopygia guttata	90.89	0.00e+00	2803.00
IUUC-Tru-118604	Takifugu rubripes	75.63	0.00e+00	2169.00
IUUC-Tsy-119237	Tarsius syrichta	97.45	0.00e+00	1310.00
IUUC-Tni-120779	Tetraodon nigroviridis	75.47	0.00e+00	2149.00
IUUC-Tca-121478	Theobroma cacao	32.39	3.00e-106	380.00
IUUC-Tre-122213	Trichoderma reesei	30.11	8.00e-115	409.00
IUUC-Tvi-122263	Trichoderma virens	29.48	8.00e-113	402.00
IUUC-Tae-125894	Triticum aestivum	29.54	5.00e-112	399.00
IUUC-Tbe-127627	Tupaia belangeri	98.99	0.00e+00	806.00
IUUC-Ttr-129242	Tursiops truncatus	95.38	0.00e+00	2885.00
IUUC-Uma-129590	Ustilago maydis	30.35	2.00e-133	471.00
IUUC-Vpa-130429	Vicugna pacos	90.33	0.00e+00	1466.00
IUUC-Xtr-131762	Xenopus tropicalis	77.09	0.00e+00	2269.00
IUUC-Xma-133693	Xiphophorus maculatus	75.60	0.00e+00	2144.00
IUUC-Zma-135829	Zea mays	29.82	7.00e-118	419.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence