iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016962

Ensembl Protein ID

Bra028566.1-P

UniProt Accession

M4EIF1; M4EIF1_BRARP

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra028566	Bra028566.1	Bra028566.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.70e-78	263.8	137	477

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           Gl+Nlg tC+mN+vLQ+L++ p+lr++ l+ +++++l  + ++    +l + l  +f+++ +++++ +sp +ll + ++ + ++ +yeqqD++Ef+
   Q: 137  GLNNLGSTCFMNAVLQALVHAPPLRNFWLSgQHNRDLCPR-RSMGLLCLPCDLDVIFSAMFSGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFF 231
           9*****************************5333333322.245566999********************************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke....... 185
             lld ++e+                    +++  +k++++ +++ ++ F g l+s+++c +c+++s++++pf+d+sl +++ + tk +       
   Q: 232  ISLLDCIHENEG------------------KSKCLYKDHEECQCITHRAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLESAKGTKSRnsgepsv 309
           ***********2..................2345688999*****************************************9998766699***** PP
   S: 186  ......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts........ 267
                 +l+ cL+ ft+ e+l  ++k++c++c +k+e++k++++++lP+ L+lh kRf+ s ++k ++ki++++++p +L++sp+++s        
   Q: 310  nspmmpTLSGCLDLFTRSEKLGPDQKLNCRSCGDKRESSKQMSMRRLPPLLCLHVKRFEHSLTRKASRKIDSYLQYPFRLNMSPYLSSsiigkrfg 405
           ****************************************************************************************99999999 PP
   S: 268  ......peekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
                 + e++++  ++e++avv HsG l sGHYv+y +  kg W+++dD  ++ev+ee v     ++ Y+lfY +
   Q: 406  nrmfafDGEGEHDGSEFEIFAVVTHSGMLASGHYVTYLRL-KGLWYRCDDAWINEVEEEVVRG---CECYMLFYAQ 477
           99999966666669**************************.999************9988888...********86 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MFTPLNDGRI KIKLPETTRC THCSVPHHHK LYICLICRTL SCSSHLLSHA RSNQGHDLAI 60
DVERSELYCS SCVDQVYDPD FDNLLVSKLG SLSVAVVASD GVGGCGVRSS KKRRLLADSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCACAC CCCTCAACGA CGGACGAATC AAGATCAAAC TCCCTGAAAC AACCAGATGC 60
ACTCACTGCT CTGTTCCTCA TCACCACAAA CTCTACATCT GCTTGATCTG CCGCACCCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000393	Aegilops tauschii	51.21	2.00e-91	329.00
IUUC-Aml-001480	Ailuropoda melanoleuca	37.16	2.00e-76	279.00
IUUC-Atr-002653	Amborella trichopoda	52.15	6.00e-134	470.00
IUUC-Apl-003433	Anas platyrhynchos	37.04	2.00e-75	275.00
IUUC-Aca-005347	Anolis carolinensis	36.27	2.00e-73	269.00
IUUC-Aly-006565	Arabidopsis lyrata	80.04	0.00e+00	771.00
IUUC-Ath-007536	Arabidopsis thaliana	79.70	0.00e+00	762.00
IUUC-Ago-007811	Ashbya gossypii	27.42	3.00e-40	159.00
IUUC-Acl-008124	Aspergillus clavatus	31.13	3.00e-54	205.00
IUUC-Afl-008464	Aspergillus flavus	31.26	1.00e-43	170.00
IUUC-Afu-008912	Aspergillus fumigatus	30.29	6.00e-50	191.00
IUUC-Ani-009168	Aspergillus nidulans	31.50	3.00e-52	199.00
IUUC-Ang-009694	Aspergillus niger	31.79	3.00e-51	196.00
IUUC-Aor-010035	Aspergillus oryzae	32.82	3.00e-32	131.00
IUUC-Ate-010382	Aspergillus terreus	32.39	1.00e-47	183.00
IUUC-Ame-011253	Astyanax mexicanus	35.02	2.00e-66	246.00
IUUC-Bgr-012150	Blumeria graminis	26.55	1.00e-38	154.00
IUUC-Bta-013303	Bos taurus	37.87	1.00e-73	270.00
IUUC-Bci-013604	Botrytis cinerea	29.30	1.00e-50	194.00
IUUC-Bdi-014171	Brachypodium distachyon	50.85	2.00e-115	409.00
IUUC-Bol-016509	Brassica oleracea	96.07	0.00e+00	944.00
IUUC-Cja-019283	Callithrix jacchus	37.41	2.00e-68	252.00
IUUC-Cfa-020956	Canis familiaris	36.71	2.00e-76	279.00
IUUC-Cpo-022014	Cavia porcellus	37.26	1.00e-75	277.00
IUUC-Csa-023824	Chlorocebus sabaeus	37.86	7.00e-75	274.00
IUUC-Cin-025109	Ciona intestinalis	32.66	5.00e-47	181.00
IUUC-Csv-026214	Ciona savignyi	33.13	4.00e-59	221.00
IUUC-Cgl-026457	Colletotrichum gloeosporioides	31.53	4.00e-53	202.00
IUUC-Cne-027085	Cryptococcus neoformans	29.57	9.00e-46	177.00
IUUC-Dre-027433	Danio rerio	38.35	1.00e-75	276.00
IUUC-Dno-030095	Dasypus novemcinctus	37.95	9.00e-75	273.00
IUUC-Dor-030832	Dipodomys ordii	39.89	3.00e-33	135.00
IUUC-Dse-031415	Dothistroma septosporum	31.75	2.00e-64	239.00
IUUC-Dme-032074	Drosophila melanogaster	35.43	6.00e-63	234.00
IUUC-Ete-032611	Echinops telfairi	27.34	1.00e-25	110.00
IUUC-Eca-033957	Equus caballus	37.21	1.00e-76	280.00
IUUC-Eeu-034814	Erinaceus europaeus	38.54	2.00e-33	136.00
IUUC-Fca-035768	Felis catus	37.68	3.00e-76	278.00
IUUC-Fal-037645	Ficedula albicollis	37.21	2.00e-75	275.00
IUUC-Fox-038046	Fusarium oxysporum	31.39	2.00e-52	199.00
IUUC-Fso-038321	Fusarium solani	30.57	2.00e-47	182.00
IUUC-Gmo-038474	Gadus morhua	39.80	2.00e-50	193.00
IUUC-Ggr-040044	Gaeumannomyces graminis	30.13	1.00e-50	194.00
IUUC-Gga-040624	Gallus gallus	37.04	4.00e-75	275.00
IUUC-Gac-042197	Gasterosteus aculeatus	37.08	2.00e-74	273.00
IUUC-Gma-043469	Glycine max	54.51	3.00e-146	511.00
IUUC-Ggo-044925	Gorilla gorilla	37.47	6.00e-76	277.00
IUUC-Hsa-046521	Homo sapiens	37.53	5.00e-74	271.00
IUUC-Hvu-047739	Hordeum vulgare	54.87	4.00e-103	367.00
IUUC-Itr-048281	Ictidomys tridecemlineatus	37.58	4.00e-75	275.00
IUUC-Kpa-049135	Komagataella pastoris	32.67	5.00e-60	224.00
IUUC-Lch-050537	Latimeria chalumnae	37.05	3.00e-74	272.00
IUUC-Lpe-050969	Leersia perrieri	55.67	5.00e-105	374.00
IUUC-Loc-052765	Lepisosteus oculatus	34.01	1.00e-59	223.00
IUUC-Lma-053105	Leptosphaeria maculans	31.32	1.00e-55	210.00
IUUC-Laf-053947	Loxodonta africana	37.47	2.00e-76	279.00
IUUC-Mcc-055420	Macaca mulatta	37.86	2.00e-74	273.00
IUUC-Mor-057103	Magnaporthe oryzae	29.13	2.00e-49	189.00
IUUC-Mpo-057621	Magnaporthe poae	29.58	5.00e-51	195.00
IUUC-Mtr-057894	Medicago truncatula	53.89	3.00e-142	498.00
IUUC-Mla-059185	Melampsora laricipopulina	30.09	2.00e-34	139.00
IUUC-Mga-059709	Meleagris gallopavo	37.04	2.00e-75	275.00
IUUC-Mvi-060530	Microbotryum violaceum	32.88	2.00e-57	216.00
IUUC-Mmr-060988	Microcebus murinus	38.16	8.00e-75	274.00
IUUC-Mdo-063065	Monodelphis domestica	36.84	3.00e-74	271.00
IUUC-Mmu-063829	Mus musculus	37.74	2.00e-74	272.00
IUUC-Mac-065419	Musa acuminata	46.43	7.00e-108	384.00
IUUC-Mpu-066433	Mustela putorius furo	37.68	2.00e-76	279.00
IUUC-Mlu-067330	Myotis lucifugus	37.68	1.00e-75	277.00
IUUC-Nfi-068423	Neosartorya fischeri	30.29	4.00e-50	191.00
IUUC-Ncr-068809	Neurospora crassa	29.03	1.00e-49	190.00
IUUC-Nle-069859	Nomascus leucogenys	37.45	4.00e-73	269.00
IUUC-Opr-070469	Ochotona princeps	35.38	4.00e-48	185.00
IUUC-Ont-071961	Oreochromis niloticus	36.71	7.00e-73	267.00
IUUC-Oan-073565	Ornithorhynchus anatinus	34.95	5.00e-72	265.00
IUUC-Ocu-074365	Oryctolagus cuniculus	36.38	5.00e-75	275.00
IUUC-Oba-075688	Oryza barthii	49.80	2.00e-111	395.00
IUUC-Obr-076652	Oryza brachyantha	55.82	1.00e-104	372.00
IUUC-Ogl-077910	Oryza glaberrima	49.70	2.00e-112	399.00
IUUC-Ogu-078479	Oryza glumaepatula	49.90	2.00e-112	399.00
IUUC-Oin-079697	Oryza indica	54.23	5.00e-103	367.00
IUUC-Olo-080811	Oryza longistaminata	53.61	1.00e-71	262.00
IUUC-Ome-081706	Oryza meridionalis	49.70	6.00e-112	398.00
IUUC-Oni-083070	Oryza nivara	49.49	1.00e-111	396.00
IUUC-Opu-083605	Oryza punctata	54.67	1.00e-96	345.00
IUUC-Oru-084522	Oryza rufipogon	49.70	2.00e-112	399.00
IUUC-Osa-085351	Oryza sativa	54.50	2.00e-104	372.00
IUUC-Ola-086743	Oryzias latipes	40.77	2.00e-67	248.00
IUUC-Olu-087695	Ostreococcus lucimarinus	34.34	2.00e-50	192.00
IUUC-Oga-088771	Otolemur garnettii	36.11	2.00e-75	275.00
IUUC-Oar-089610	Ovis aries	36.51	4.00e-76	278.00
IUUC-Ptr-090783	Pan troglodytes	37.32	8.00e-74	270.00
IUUC-Pan-091707	Papio anubis	37.65	1.00e-74	274.00
IUUC-Psi-093670	Pelodiscus sinensis	37.24	3.00e-75	275.00
IUUC-Pma-094323	Petromyzon marinus	34.39	3.00e-59	222.00
IUUC-Pno-095141	Phaeosphaeria nodorum	29.63	3.00e-49	189.00
IUUC-Ppa-095413	Physcomitrella patens	43.73	4.00e-114	405.00
IUUC-Pfo-096473	Poecilia formosa	37.76	5.00e-75	275.00
IUUC-Pab-098324	Pongo abelii	37.47	7.00e-76	277.00
IUUC-Pop-099893	Populus trichocarpa	58.38	1.00e-161	563.00
IUUC-Pca-100329	Procavia capensis	37.47	4.00e-76	278.00
IUUC-Ppe-101583	Prunus persica	57.57	1.00e-145	509.00
IUUC-Pva-102721	Pteropus vampyrus	36.02	3.00e-67	248.00
IUUC-Pgr-103657	Puccinia graminis	25.70	3.00e-27	116.00
IUUC-Pte-104340	Pyrenophora teres	29.77	7.00e-54	204.00
IUUC-Pyt-104782	Pyrenophora triticirepentis	30.93	1.00e-56	214.00
IUUC-Rno-105247	Rattus norvegicus	37.74	2.00e-74	272.00
IUUC-Sce-106247	Saccharomyces cerevisiae	28.17	2.00e-43	169.00
IUUC-Sja-107656	Schizosaccharomyces japonicus	29.76	2.00e-50	192.00
IUUC-Spo-108226	Schizosaccharomyces pombe	30.93	1.00e-55	209.00
IUUC-Ssl-108531	Sclerotinia sclerotiorum	28.86	1.00e-46	181.00
IUUC-Smo-109595	Selaginella moellendorffii	49.80	2.00e-115	409.00
IUUC-Sit-109716	Setaria italica	49.90	1.00e-120	426.00
IUUC-Sly-111077	Solanum lycopersicum	54.71	3.00e-146	511.00
IUUC-Stu-112203	Solanum tuberosum	56.64	2.00e-136	478.00
IUUC-Sar-113174	Sorex araneus	37.33	6.00e-69	254.00
IUUC-Sbi-114205	Sorghum bicolor	49.20	4.00e-122	431.00
IUUC-Sre-115195	Sporisorium reilianum	25.73	2.00e-42	167.00
IUUC-Ssc-115500	Sus scrofa	38.16	6.00e-76	278.00
IUUC-Tgu-116938	Taeniopygia guttata	37.05	2.00e-74	272.00
IUUC-Tru-118304	Takifugu rubripes	37.24	2.00e-74	272.00
IUUC-Tsy-119413	Tarsius syrichta	35.29	4.00e-72	265.00
IUUC-Tni-120661	Tetraodon nigroviridis	37.89	2.00e-75	276.00
IUUC-Tca-121154	Theobroma cacao	60.08	3.00e-166	577.00
IUUC-Tre-122139	Trichoderma reesei	30.75	1.00e-49	190.00
IUUC-Tvi-122599	Trichoderma virens	29.96	6.00e-51	194.00
IUUC-Tae-125608	Triticum aestivum	51.01	2.00e-123	435.00
IUUC-Tme-127115	Tuber melanosporum	33.91	3.00e-66	245.00
IUUC-Ttr-129006	Tursiops truncatus	37.23	1.00e-73	270.00
IUUC-Uma-129455	Ustilago maydis	29.76	3.00e-26	113.00
IUUC-Vda-129829	Verticillium dahliae	30.13	5.00e-31	127.00
IUUC-Vvi-131477	Vitis vinifera	58.25	6.00e-150	523.00
IUUC-Xtr-132444	Xenopus tropicalis	37.86	2.00e-77	283.00
IUUC-Xma-133514	Xiphophorus maculatus	37.47	7.00e-75	274.00
IUUC-Yli-134357	Yarrowia lipolytica	29.86	2.00e-37	149.00
IUUC-Zma-134945	Zea mays	51.11	2.00e-119	422.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence