iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057679

Ensembl Protein ID

AES74237

UniProt Accession

G7J7R1; G7J7R1_MEDTR

Genbank Protein ID

AES74237.1

Protein Name

PHD finger and bromo-adjacent-like domain protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g117280

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g117280	AES74237	AES74237

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-08	35.3	120	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C  C+ +++ ++ +v+C++C++wfHpaC  ++vee  + + ++ C++C+
   Q: 120  VYC-KCEMPYNPDEVMVQCDHCTDWFHPACIDMTVEEAERID-NFSCESCS 168
           588.7*****************************77776666.5******7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNSDMSFREG DCVRMRSSKP LIPTYVAIIE EMKADSRDVR VRWYYWPEET KKGRRHFHGS 60
KELILSDHFD VQSVDTIEGK CTVHSLKKYM KLDVVGDDDF FCRFNYNSAT GALTPDIVQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTCAG ATATGTCATT CCGTGGTAAG TTATAATCAA AATTTTAAAC TATCATTATT 60
TTGTATTTTT ATTTTAATTG TACCTGATTG GAAATCTACA TTTTTTTTTT ATTTTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0035067--P:negative regulation of histone acetylation
GO:0009791--P:post-embryonic development
GO:2000028--P:regulation of photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

mtr:MTR_3g117280

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002427	Ailuropoda melanoleuca	42.31	7.00e-10	58.90
IUUC-Aca-004346	Anolis carolinensis	38.16	7.00e-12	65.90
IUUC-Cfa-021156	Canis familiaris	42.31	7.00e-10	59.30
IUUC-Cpo-022284	Cavia porcellus	41.54	3.00e-11	63.50
IUUC-Csa-023515	Chlorocebus sabaeus	41.54	7.00e-11	62.40
IUUC-Cne-026898	Cryptococcus neoformans	40.82	6.00e-07	49.70
IUUC-Dre-028423	Danio rerio	38.46	5.00e-10	59.70
IUUC-Dno-029446	Dasypus novemcinctus	43.08	3.00e-11	62.80
IUUC-Ete-032380	Echinops telfairi	43.08	5.00e-11	63.20
IUUC-Eca-034302	Equus caballus	42.31	7.00e-10	59.30
IUUC-Fca-035578	Felis catus	42.31	7.00e-10	59.30
IUUC-Fal-037017	Ficedula albicollis	46.00	1.00e-10	62.00
IUUC-Gmo-038789	Gadus morhua	36.36	5.00e-10	59.70
IUUC-Gac-041666	Gasterosteus aculeatus	36.23	3.00e-10	60.50
IUUC-Ggo-044712	Gorilla gorilla	41.79	6.00e-11	62.80
IUUC-Hsa-045724	Homo sapiens	41.54	6.00e-11	62.80
IUUC-Lch-049793	Latimeria chalumnae	40.91	5.00e-11	63.20
IUUC-Loc-051927	Lepisosteus oculatus	46.00	2.00e-10	60.80
IUUC-Laf-053656	Loxodonta africana	43.08	4.00e-11	63.20
IUUC-Mcc-055658	Macaca mulatta	41.54	7.00e-11	62.40
IUUC-Mvi-060256	Microbotryum violaceum	30.36	2.00e-06	47.00
IUUC-Mmr-060993	Microcebus murinus	41.54	6.00e-11	62.80
IUUC-Mdo-062097	Monodelphis domestica	37.68	8.00e-10	58.90
IUUC-Mmu-063909	Mus musculus	41.54	7.00e-11	62.80
IUUC-Mpu-066429	Mustela putorius furo	42.31	7.00e-10	59.30
IUUC-Mlu-067746	Myotis lucifugus	37.50	2.00e-10	60.80
IUUC-Nle-070143	Nomascus leucogenys	41.54	7.00e-11	62.40
IUUC-Ont-071935	Oreochromis niloticus	44.00	6.00e-07	49.70
IUUC-Oan-073654	Ornithorhynchus anatinus	42.31	1.00e-09	58.50
IUUC-Ola-087502	Oryzias latipes	37.68	2.00e-10	61.20
IUUC-Oga-088662	Otolemur garnettii	41.54	6.00e-11	62.80
IUUC-Oar-090332	Ovis aries	42.31	7.00e-10	59.30
IUUC-Ptr-091646	Pan troglodytes	41.54	5.00e-11	62.80
IUUC-Pan-092122	Papio anubis	41.54	7.00e-11	62.80
IUUC-Pma-094621	Petromyzon marinus	43.75	1.00e-09	57.00
IUUC-Pfo-096107	Poecilia formosa	36.25	6.00e-11	62.80
IUUC-Pab-097635	Pongo abelii	41.54	6.00e-11	62.80
IUUC-Pca-100779	Procavia capensis	40.24	8.00e-12	65.90
IUUC-Pva-102839	Pteropus vampyrus	42.31	7.00e-10	59.30
IUUC-Rno-105933	Rattus norvegicus	41.54	7.00e-11	62.80
IUUC-Ssc-115645	Sus scrofa	42.31	7.00e-10	59.30
IUUC-Tgu-117091	Taeniopygia guttata	46.00	1.00e-10	62.00
IUUC-Tru-118403	Takifugu rubripes	34.83	9.00e-11	62.40
IUUC-Tsy-119214	Tarsius syrichta	41.54	5.00e-11	63.20
IUUC-Tni-119736	Tetraodon nigroviridis	35.96	1.00e-11	64.70
IUUC-Tbe-128138	Tupaia belangeri	53.57	3.00e-05	43.90
IUUC-Vpa-130595	Vicugna pacos	42.31	7.00e-10	59.30
IUUC-Xtr-132307	Xenopus tropicalis	40.00	1.00e-10	61.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence