iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057756

Ensembl Protein ID

AES60379

UniProt Accession

G7I632; G7I632_MEDTR

Genbank Protein ID

AES60379.1

Protein Name

Pre-mRNA-processing factor

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g044720

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g044720	AES60379	AES60379

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-12	48.1	4	66
E3 adaptor/Cullin RING/DCX/DWD	3.80e-23	82.0	262	292
UBD/Beta-Prp	3.10e-46	159.3	217	425

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 11   slelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           s+e++ +Pvv++ sG  ++++ Ie+++ + gk cPvt++plt +d+vP +t + +  + +++ s
   Q: 4    SGEVPDEPVVSKsSGLLFEKRLIERHIMDFGK-CPVTGEPLTMDDIVPIKTGKIVKPRPVQAAS 66
           89*********99*******************.*********************9998887765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+ +vt+++f  ++  +++Gs D+t+++W 
   Q: 262  GHSKKVTSVKFvgQGESIITGSADKTVRLWQ 292
           8**********976699*************6 PP

UBD/Beta-Prp

   S: 48   l.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvw...dletgqcleetlsghdgvvncvv 144
           l +  ++++ a+++ +++++++tg  D ++ ++d  +g+ + tl+gh+++v+s++f  +g+++++Gs+d+t+r+w   d  ++ c + +l+ h++ v  v+
   Q: 217  LnKTSKQGIIALDILHSKDLIATGNIDTNAVIFDRPSGQVLATLTGHSKKVTSVKFVGQGESIITGSADKTVRLWqgsDDGHYNCKQ-ILKDHSAEVEAVT 316
           44556677******************************************************************8333556677777.************* PP
   S: 145  vhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgs 245
           vh ++n++v++slD+   ++ l++g++l++ +    +  +s +f+++g  l +g +d+ vk+wd++++  v ++ gh   v+ + fs+n+ +l+++++Dg 
   Q: 317  VHATNNYFVTASLDGSWCFYELSSGTCLTQVSD-SSEGYTSAAFHPDGLILGTGTTDSLVKIWDVKSQANVAKFDGHVGHVTAISFSENGYYLATAAHDG- 415
           *******************************98.99999************************************************9999999998765. PP
   S: 246  iriWdlrsgd 255
           +++Wdlr+ +
   Q: 416  VKLWDLRKLK 425
           8*****9976 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNFSGEVPDE PVVSKSSGLL FEKRLIERHI MDFGKCPVTG EPLTMDDIVP IKTGKIVKPR 60
PVQAASIPGM LGMFQNEWDG LMLSNFALEQ QLHTARQELS HALYQHDAAC RVIARLKKER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTGCT CCAGTTAATT TCTTCTTCCT CTATTCTCTT CTTTCGTTTC TTCTCTGTTT 60
CGATTTCGAA TTTCATTGTT TTTGATCTGC GATTTTTTTT TTTTTTTTTG CAGTTTCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_1g044720

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	67.77	0.00e+00	727.00
IUUC-Aml-001230	Ailuropoda melanoleuca	43.36	5.00e-106	377.00
IUUC-Atr-002594	Amborella trichopoda	71.48	0.00e+00	790.00
IUUC-Apl-003686	Anas platyrhynchos	42.96	4.00e-81	294.00
IUUC-Aca-005272	Anolis carolinensis	44.66	2.00e-111	395.00
IUUC-Aly-005586	Arabidopsis lyrata	73.59	0.00e+00	800.00
IUUC-Ath-007696	Arabidopsis thaliana	73.01	0.00e+00	786.00
IUUC-Ago-007879	Ashbya gossypii	24.75	3.00e-26	112.00
IUUC-Acl-008335	Aspergillus clavatus	33.05	2.00e-61	229.00
IUUC-Afl-008527	Aspergillus flavus	32.43	2.00e-63	236.00
IUUC-Afu-008957	Aspergillus fumigatus	34.67	1.00e-67	249.00
IUUC-Ani-009280	Aspergillus nidulans	34.93	3.00e-60	225.00
IUUC-Ang-009746	Aspergillus niger	34.11	4.00e-63	234.00
IUUC-Aor-009905	Aspergillus oryzae	32.43	9.00e-66	243.00
IUUC-Ate-010412	Aspergillus terreus	34.11	2.00e-59	222.00
IUUC-Ame-011561	Astyanax mexicanus	40.48	1.00e-38	152.00
IUUC-Bgr-012283	Blumeria graminis	32.09	6.00e-52	197.00
IUUC-Bta-013242	Bos taurus	44.08	3.00e-111	394.00
IUUC-Bci-013901	Botrytis cinerea	32.16	3.00e-62	231.00
IUUC-Bdi-014277	Brachypodium distachyon	73.36	0.00e+00	802.00
IUUC-Bol-016207	Brassica oleracea	73.59	0.00e+00	798.00
IUUC-Bra-017650	Brassica rapa	73.79	0.00e+00	797.00
IUUC-Cel-018271	Caenorhabditis elegans	39.81	6.00e-99	353.00
IUUC-Cja-019879	Callithrix jacchus	43.99	1.00e-109	389.00
IUUC-Cfa-020175	Canis familiaris	43.88	3.00e-111	394.00
IUUC-Cpo-022379	Cavia porcellus	44.27	1.00e-111	395.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	45.45	3.00e-127	448.00
IUUC-Csa-023500	Chlorocebus sabaeus	43.88	8.00e-111	393.00
IUUC-Cho-025065	Choloepus hoffmanni	34.60	4.00e-41	160.00
IUUC-Cin-025699	Ciona intestinalis	46.30	2.00e-101	362.00
IUUC-Csv-026128	Ciona savignyi	45.52	8.00e-115	406.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	32.88	2.00e-62	232.00
IUUC-Cne-026860	Cryptococcus neoformans	37.09	7.00e-89	320.00
IUUC-Dre-028187	Danio rerio	42.61	8.00e-106	376.00
IUUC-Dno-029453	Dasypus novemcinctus	43.88	9.00e-111	393.00
IUUC-Dor-030150	Dipodomys ordii	42.17	3.00e-40	159.00
IUUC-Dse-031220	Dothistroma septosporum	32.23	2.00e-60	225.00
IUUC-Dme-031906	Drosophila melanogaster	44.38	3.00e-108	384.00
IUUC-Ete-033035	Echinops telfairi	44.44	8.00e-53	200.00
IUUC-Eca-033478	Equus caballus	44.08	4.00e-111	394.00
IUUC-Eeu-034974	Erinaceus europaeus	44.81	2.00e-72	265.00
IUUC-Fca-036194	Felis catus	44.05	4.00e-111	394.00
IUUC-Fal-037417	Ficedula albicollis	44.66	3.00e-112	397.00
IUUC-Fox-037922	Fusarium oxysporum	31.60	3.00e-61	228.00
IUUC-Fso-038256	Fusarium solani	32.03	6.00e-64	237.00
IUUC-Gmo-038713	Gadus morhua	43.19	3.00e-108	384.00
IUUC-Ggr-039854	Gaeumannomyces graminis	31.99	1.00e-51	196.00
IUUC-Gga-041143	Gallus gallus	44.47	4.00e-112	397.00
IUUC-Gac-042129	Gasterosteus aculeatus	43.97	3.00e-110	391.00
IUUC-Gma-043635	Glycine max	87.43	0.00e+00	954.00
IUUC-Ggo-045262	Gorilla gorilla	43.88	8.00e-111	393.00
IUUC-Hsa-046036	Homo sapiens	43.88	8.00e-111	393.00
IUUC-Hvu-047442	Hordeum vulgare	69.35	1.00e-129	454.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	43.88	9.00e-108	383.00
IUUC-Lch-050105	Latimeria chalumnae	43.50	6.00e-110	390.00
IUUC-Lpe-050976	Leersia perrieri	73.36	0.00e+00	790.00
IUUC-Loc-052042	Lepisosteus oculatus	40.54	9.00e-79	286.00
IUUC-Lma-053143	Leptosphaeria maculans	31.99	6.00e-59	222.00
IUUC-Laf-053451	Loxodonta africana	42.48	2.00e-107	382.00
IUUC-Mcc-055786	Macaca mulatta	43.88	8.00e-111	393.00
IUUC-Meu-056161	Macropus eugenii	42.24	7.00e-47	181.00
IUUC-Mor-057215	Magnaporthe oryzae	33.33	3.00e-55	208.00
IUUC-Mpo-057419	Magnaporthe poae	30.43	4.00e-47	181.00
IUUC-Mla-059085	Melampsora laricipopulina	35.87	3.00e-72	265.00
IUUC-Mga-060158	Meleagris gallopavo	44.28	2.00e-100	358.00
IUUC-Mvi-060441	Microbotryum violaceum	35.46	2.00e-71	262.00
IUUC-Mmr-061085	Microcebus murinus	43.88	8.00e-111	393.00
IUUC-Mdo-061804	Monodelphis domestica	43.88	8.00e-111	393.00
IUUC-Mmu-063608	Mus musculus	42.32	1.00e-107	382.00
IUUC-Mac-064972	Musa acuminata	75.15	0.00e+00	809.00
IUUC-Mpu-065700	Mustela putorius furo	43.88	3.00e-111	394.00
IUUC-Mlu-068223	Myotis lucifugus	42.83	6.00e-108	384.00
IUUC-Nfi-068504	Neosartorya fischeri	35.16	2.00e-69	256.00
IUUC-Ncr-068729	Neurospora crassa	30.30	3.00e-55	208.00
IUUC-Nle-069754	Nomascus leucogenys	43.88	8.00e-111	393.00
IUUC-Opr-070621	Ochotona princeps	45.69	1.00e-105	375.00
IUUC-Ont-071377	Oreochromis niloticus	43.19	6.00e-107	380.00
IUUC-Oan-073498	Ornithorhynchus anatinus	30.75	2.00e-32	132.00
IUUC-Ocu-074182	Oryctolagus cuniculus	42.16	5.00e-107	380.00
IUUC-Oba-075509	Oryza barthii	74.76	0.00e+00	804.00
IUUC-Obr-076480	Oryza brachyantha	74.56	0.00e+00	808.00
IUUC-Ogl-077052	Oryza glaberrima	74.76	0.00e+00	805.00
IUUC-Ogu-078919	Oryza glumaepatula	74.95	0.00e+00	805.00
IUUC-Oin-079357	Oryza indica	71.46	0.00e+00	748.00
IUUC-Olo-080376	Oryza longistaminata	74.69	0.00e+00	758.00
IUUC-Ome-081973	Oryza meridionalis	74.49	0.00e+00	756.00
IUUC-Oni-082849	Oryza nivara	74.37	0.00e+00	800.00
IUUC-Opu-083243	Oryza punctata	74.76	0.00e+00	805.00
IUUC-Oru-084613	Oryza rufipogon	74.56	0.00e+00	801.00
IUUC-Osa-085407	Oryza sativa	74.76	0.00e+00	805.00
IUUC-Ola-086566	Oryzias latipes	43.00	9.00e-107	380.00
IUUC-Olu-087757	Ostreococcus lucimarinus	44.20	1.00e-112	399.00
IUUC-Oga-089010	Otolemur garnettii	43.00	1.00e-105	375.00
IUUC-Oar-089638	Ovis aries	44.08	3.00e-111	394.00
IUUC-Ptr-091141	Pan troglodytes	43.88	8.00e-111	393.00
IUUC-Pan-092662	Papio anubis	43.88	8.00e-111	393.00
IUUC-Psi-093777	Pelodiscus sinensis	44.60	1.00e-88	319.00
IUUC-Pno-095115	Phaeosphaeria nodorum	32.43	6.00e-59	221.00
IUUC-Ppa-095924	Physcomitrella patens	68.93	0.00e+00	728.00
IUUC-Pfo-096390	Poecilia formosa	43.84	5.00e-108	384.00
IUUC-Pab-098250	Pongo abelii	44.38	2.00e-106	379.00
IUUC-Pop-099854	Populus trichocarpa	76.36	0.00e+00	851.00
IUUC-Pca-100553	Procavia capensis	43.88	1.00e-108	385.00
IUUC-Ppe-101383	Prunus persica	74.42	0.00e+00	800.00
IUUC-Pva-102189	Pteropus vampyrus	44.08	2.00e-111	395.00
IUUC-Pgr-103304	Puccinia graminis	34.88	9.00e-73	267.00
IUUC-Ptt-103984	Puccinia triticina	34.69	1.00e-73	270.00
IUUC-Pte-104385	Pyrenophora teres	30.41	8.00e-58	217.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	30.60	5.00e-58	218.00
IUUC-Rno-105581	Rattus norvegicus	43.88	4.00e-111	394.00
IUUC-Sce-106147	Saccharomyces cerevisiae	25.42	8.00e-22	97.80
IUUC-Sha-107071	Sarcophilus harrisii	42.09	5.00e-107	380.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	28.54	2.00e-39	156.00
IUUC-Spo-108315	Schizosaccharomyces pombe	31.60	1.00e-37	150.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	31.77	8.00e-60	223.00
IUUC-Smo-109648	Selaginella moellendorffii	65.82	0.00e+00	716.00
IUUC-Sit-109873	Setaria italica	74.17	0.00e+00	800.00
IUUC-Sly-111673	Solanum lycopersicum	76.16	0.00e+00	819.00
IUUC-Stu-112125	Solanum tuberosum	76.55	0.00e+00	820.00
IUUC-Sbi-114696	Sorghum bicolor	68.89	0.00e+00	713.00
IUUC-Sre-115134	Sporisorium reilianum	33.70	4.00e-74	271.00
IUUC-Ssc-116260	Sus scrofa	44.08	2.00e-111	395.00
IUUC-Tgu-116533	Taeniopygia guttata	44.47	4.00e-112	397.00
IUUC-Tru-117800	Takifugu rubripes	43.66	4.00e-110	391.00
IUUC-Tsy-118980	Tarsius syrichta	42.13	3.00e-98	351.00
IUUC-Tni-120334	Tetraodon nigroviridis	43.57	7.00e-73	267.00
IUUC-Tca-121807	Theobroma cacao	75.48	0.00e+00	834.00
IUUC-Tre-121920	Trichoderma reesei	32.22	2.00e-56	212.00
IUUC-Tvi-122294	Trichoderma virens	30.86	8.00e-46	177.00
IUUC-Tae-125794	Triticum aestivum	72.15	0.00e+00	791.00
IUUC-Tur-126199	Triticum urartu	63.19	0.00e+00	738.00
IUUC-Tme-127026	Tuber melanosporum	35.01	2.00e-66	246.00
IUUC-Tbe-127582	Tupaia belangeri	44.51	3.00e-72	265.00
IUUC-Ttr-128313	Tursiops truncatus	44.08	5.00e-110	390.00
IUUC-Uma-129626	Ustilago maydis	34.82	6.00e-75	274.00
IUUC-Vda-129699	Verticillium dahliae	30.58	2.00e-55	209.00
IUUC-Vpa-130593	Vicugna pacos	45.91	1.00e-105	376.00
IUUC-Vvi-131668	Vitis vinifera	79.65	0.00e+00	880.00
IUUC-Xtr-132186	Xenopus tropicalis	46.88	1.00e-98	352.00
IUUC-Xma-133212	Xiphophorus maculatus	44.03	3.00e-107	381.00
IUUC-Yli-134607	Yarrowia lipolytica	50.00	6.00e-33	132.00
IUUC-Zma-135662	Zea mays	73.59	0.00e+00	798.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence