iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114696

UUCD1 version

UUC-SoB-00268

Ensembl Protein ID

Sb01g019790.1

UniProt Accession

A0A1B6QKE9; A0A1B6QKE9_SORBI

Genbank Protein ID

KXG38386.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G226000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g019790	Sb01g019790.1	Sb01g019790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.60e-15	55.5	1	68
E3 adaptor/Cullin RING/DCX/DWD	7.80e-26	89.9	270	300
UBD/Beta-Prp	1.30e-47	163.3	236	440

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++C+Is+e++ +Pvv++ sG  ++r+ Ie+++++ gk cPvt++ lt +d+vP +t + +  + +++ s
   Q: 1    MICAISGEVPDEPVVSKkSGLLFERRLIERYVEDHGK-CPVTKEDLTMDDIVPVKTNKVVKPRPLQAAS 68
           58******************************99999.********************99998888765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+ ++t l+f   d l+v+Gs D+t+++W 
   Q: 270  GHSKKITTLKFvpRDQLFVTGSADKTVRIWQ 300
           8***********877***************5 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw.dls...tgkcvhtlkghedsvlslsfspsgd 107
           v + ++++++atg+ d    ++d  +g+ l +l gh++++t++kf p+++++vtgs D+t+++w + +   ++ cvhtlk h+++v +++++++++
   Q: 236  VLVMDSQDIVATGGIDTNAVLFDRASGQILCTLTGHSKKITTLKFVPRDQLFVTGSADKTVRIWqE-NengSYNCVHTLKDHTAEVEAVTVHATQK 330
           566777888888888888888888888888888888888888888888888888888888888851.33447888888888888888888888888 PP
   S: 108  klvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
           ++vs+s+d+    +d++tg+cl +  ++  ++  +++++hpdg +l +G++D + ++Wd+kt++ + +++g h ++v+ +sf++ng +l+++++dg
   Q: 331  YFVSASKDNSWCFYDMSTGSCLTQvGEASGQEGYTSAAFHPDGLILGTGTTDAVAKIWDVKTQSNVAKFEG-HVGPVTAMSFSENGYFLATAAHDG 425
           88888888888888888888888763444455667788888888888888888888888888888888888.888888888888888888888887 PP
   S: 203  tvklwdlqtgecvrtl 218
            vklwdl++ +  rt+
   Q: 426  -VKLWDLRKLRNFRTF 440
           .788888866656655 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MICAISGEVP DEPVVSKKSG LLFERRLIER YVEDHGKCPV TKEDLTMDDI VPVKTNKVVK 60
PRPLQAASIP GLLGIFQNEW DALMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCTGCG CGAGTAATGC CCCTCTCTCC CTGCCTCGCA TCTCTGCTTC TCCTAACCCT 60
AGCTTCTCTG ATCCGTCGCT TCGCGAGCTA ACTCGTCCCG TGTCGCTTCT CCCGTAGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	73.24	0.00e+00	796.00
IUUC-Aml-001230	Ailuropoda melanoleuca	42.69	8.00e-107	379.00
IUUC-Atr-002594	Amborella trichopoda	68.44	0.00e+00	752.00
IUUC-Apl-003686	Anas platyrhynchos	40.54	6.00e-77	280.00
IUUC-Aca-005272	Anolis carolinensis	42.64	3.00e-110	390.00
IUUC-Aly-005586	Arabidopsis lyrata	66.92	0.00e+00	724.00
IUUC-Ath-007696	Arabidopsis thaliana	64.81	0.00e+00	708.00
IUUC-Ago-007879	Ashbya gossypii	46.15	3.00e-28	119.00
IUUC-Acl-008335	Aspergillus clavatus	32.88	2.00e-57	216.00
IUUC-Afl-008527	Aspergillus flavus	47.29	3.00e-44	171.00
IUUC-Afu-008957	Aspergillus fumigatus	32.82	3.00e-68	251.00
IUUC-Ani-009280	Aspergillus nidulans	33.65	8.00e-58	216.00
IUUC-Ang-009746	Aspergillus niger	32.99	1.00e-61	229.00
IUUC-Aor-009905	Aspergillus oryzae	34.91	6.00e-66	243.00
IUUC-Ate-010412	Aspergillus terreus	34.23	2.00e-59	222.00
IUUC-Ame-011561	Astyanax mexicanus	44.33	1.00e-34	139.00
IUUC-Bgr-012283	Blumeria graminis	30.64	4.00e-50	191.00
IUUC-Bta-013242	Bos taurus	42.83	3.00e-110	390.00
IUUC-Bci-013901	Botrytis cinerea	32.82	2.00e-64	238.00
IUUC-Bdi-014277	Brachypodium distachyon	83.65	0.00e+00	914.00
IUUC-Bol-016207	Brassica oleracea	64.55	0.00e+00	707.00
IUUC-Bra-017650	Brassica rapa	64.26	0.00e+00	704.00
IUUC-Cel-018271	Caenorhabditis elegans	37.71	2.00e-95	342.00
IUUC-Cja-019879	Callithrix jacchus	42.94	8.00e-109	386.00
IUUC-Cfa-020175	Canis familiaris	42.64	1.00e-109	389.00
IUUC-Cpo-022379	Cavia porcellus	42.27	7.00e-110	390.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	45.52	8.00e-120	422.00
IUUC-Csa-023500	Chlorocebus sabaeus	42.83	7.00e-110	389.00
IUUC-Cho-025065	Choloepus hoffmanni	44.67	1.00e-37	149.00
IUUC-Cin-025699	Ciona intestinalis	45.05	8.00e-95	339.00
IUUC-Csv-026128	Ciona savignyi	41.17	4.00e-104	371.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	32.58	1.00e-64	239.00
IUUC-Cne-026860	Cryptococcus neoformans	35.46	6.00e-84	303.00
IUUC-Dre-028187	Danio rerio	40.98	1.00e-106	379.00
IUUC-Dno-029453	Dasypus novemcinctus	42.83	9.00e-110	389.00
IUUC-Dor-030150	Dipodomys ordii	39.10	3.00e-34	138.00
IUUC-Dse-031220	Dothistroma septosporum	32.14	2.00e-61	229.00
IUUC-Dme-031906	Drosophila melanogaster	41.51	2.00e-100	358.00
IUUC-Ete-033035	Echinops telfairi	45.15	8.00e-56	210.00
IUUC-Eca-033478	Equus caballus	42.83	4.00e-110	390.00
IUUC-Eeu-034974	Erinaceus europaeus	42.29	1.00e-68	253.00
IUUC-Fca-036194	Felis catus	42.09	1.00e-107	382.00
IUUC-Fal-037417	Ficedula albicollis	43.02	1.00e-110	392.00
IUUC-Fox-037922	Fusarium oxysporum	33.20	1.00e-65	243.00
IUUC-Fso-038256	Fusarium solani	31.94	4.00e-68	251.00
IUUC-Gmo-038713	Gadus morhua	41.35	2.00e-107	381.00
IUUC-Ggr-039854	Gaeumannomyces graminis	29.77	3.00e-48	185.00
IUUC-Gga-041143	Gallus gallus	43.02	3.00e-110	391.00
IUUC-Gac-042129	Gasterosteus aculeatus	41.54	1.00e-109	389.00
IUUC-Gma-043635	Glycine max	69.85	0.00e+00	775.00
IUUC-Ggo-045262	Gorilla gorilla	42.83	7.00e-110	389.00
IUUC-Hsa-046036	Homo sapiens	42.83	7.00e-110	389.00
IUUC-Hvu-047442	Hordeum vulgare	80.62	1.00e-149	521.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	42.21	3.00e-106	377.00
IUUC-Lch-050105	Latimeria chalumnae	41.04	4.00e-107	380.00
IUUC-Lpe-050976	Leersia perrieri	83.64	0.00e+00	898.00
IUUC-Loc-052042	Lepisosteus oculatus	39.51	1.00e-79	289.00
IUUC-Lma-053143	Leptosphaeria maculans	32.85	1.00e-60	228.00
IUUC-Laf-053451	Loxodonta africana	41.52	9.00e-107	379.00
IUUC-Mcc-055786	Macaca mulatta	42.83	7.00e-110	389.00
IUUC-Meu-056161	Macropus eugenii	39.52	2.00e-42	165.00
IUUC-Mor-057215	Magnaporthe oryzae	32.70	7.00e-57	214.00
IUUC-Mpo-057419	Magnaporthe poae	32.40	6.00e-53	201.00
IUUC-Mtr-057756	Medicago truncatula	69.27	0.00e+00	752.00
IUUC-Mla-059085	Melampsora laricipopulina	34.56	3.00e-74	271.00
IUUC-Mga-060158	Meleagris gallopavo	42.08	2.00e-94	338.00
IUUC-Mvi-060441	Microbotryum violaceum	34.26	7.00e-69	253.00
IUUC-Mmr-061085	Microcebus murinus	42.83	7.00e-110	389.00
IUUC-Mdo-061804	Monodelphis domestica	42.83	6.00e-110	390.00
IUUC-Mmu-063608	Mus musculus	40.83	2.00e-106	378.00
IUUC-Mac-064972	Musa acuminata	75.43	0.00e+00	816.00
IUUC-Mpu-065700	Mustela putorius furo	42.64	9.00e-110	389.00
IUUC-Mlu-068223	Myotis lucifugus	41.67	3.00e-108	384.00
IUUC-Nfi-068504	Neosartorya fischeri	33.54	2.00e-66	245.00
IUUC-Ncr-068729	Neurospora crassa	31.05	9.00e-58	216.00
IUUC-Nle-069754	Nomascus leucogenys	42.83	7.00e-110	389.00
IUUC-Opr-070621	Ochotona princeps	43.57	8.00e-101	359.00
IUUC-Ont-071377	Oreochromis niloticus	41.92	9.00e-107	379.00
IUUC-Oan-073498	Ornithorhynchus anatinus	29.51	3.00e-27	114.00
IUUC-Ocu-074182	Oryctolagus cuniculus	41.22	4.00e-106	377.00
IUUC-Oba-075509	Oryza barthii	83.52	0.00e+00	914.00
IUUC-Obr-076480	Oryza brachyantha	84.23	0.00e+00	926.00
IUUC-Ogl-077052	Oryza glaberrima	82.93	0.00e+00	915.00
IUUC-Ogu-078919	Oryza glumaepatula	82.75	0.00e+00	914.00
IUUC-Oin-079357	Oryza indica	79.41	0.00e+00	858.00
IUUC-Olo-080376	Oryza longistaminata	81.85	0.00e+00	847.00
IUUC-Ome-081973	Oryza meridionalis	82.67	0.00e+00	848.00
IUUC-Oni-082849	Oryza nivara	82.75	0.00e+00	915.00
IUUC-Opu-083243	Oryza punctata	83.30	0.00e+00	918.00
IUUC-Oru-084613	Oryza rufipogon	82.75	0.00e+00	913.00
IUUC-Osa-085407	Oryza sativa	82.75	0.00e+00	912.00
IUUC-Ola-086566	Oryzias latipes	41.23	5.00e-106	377.00
IUUC-Olu-087757	Ostreococcus lucimarinus	41.62	9.00e-107	379.00
IUUC-Oga-089010	Otolemur garnettii	42.42	7.00e-109	386.00
IUUC-Oar-089638	Ovis aries	42.83	3.00e-110	390.00
IUUC-Ptr-091141	Pan troglodytes	42.83	7.00e-110	389.00
IUUC-Pan-092662	Papio anubis	42.83	7.00e-110	389.00
IUUC-Psi-093777	Pelodiscus sinensis	42.07	2.00e-84	305.00
IUUC-Pno-095115	Phaeosphaeria nodorum	33.33	3.00e-64	238.00
IUUC-Ppa-095924	Physcomitrella patens	65.21	0.00e+00	696.00
IUUC-Pfo-096390	Poecilia formosa	41.73	1.00e-107	382.00
IUUC-Pab-098250	Pongo abelii	42.83	5.00e-104	370.00
IUUC-Pop-099854	Populus trichocarpa	68.47	0.00e+00	756.00
IUUC-Pca-100553	Procavia capensis	42.83	6.00e-108	383.00
IUUC-Ppe-101383	Prunus persica	67.42	0.00e+00	733.00
IUUC-Pva-102189	Pteropus vampyrus	42.83	3.00e-110	391.00
IUUC-Pgr-103304	Puccinia graminis	32.97	4.00e-72	265.00
IUUC-Ptt-103984	Puccinia triticina	32.84	2.00e-72	265.00
IUUC-Pte-104385	Pyrenophora teres	31.62	5.00e-62	231.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	31.95	5.00e-62	230.00
IUUC-Rno-105581	Rattus norvegicus	42.27	7.00e-110	390.00
IUUC-Sce-106147	Saccharomyces cerevisiae	41.26	2.00e-24	105.00
IUUC-Sha-107071	Sarcophilus harrisii	41.14	4.00e-106	377.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	30.10	1.00e-43	170.00
IUUC-Spo-108315	Schizosaccharomyces pombe	30.68	2.00e-42	166.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	32.19	1.00e-61	229.00
IUUC-Smo-109648	Selaginella moellendorffii	60.54	0.00e+00	669.00
IUUC-Sit-109873	Setaria italica	88.66	0.00e+00	938.00
IUUC-Sly-111673	Solanum lycopersicum	69.81	0.00e+00	747.00
IUUC-Stu-112125	Solanum tuberosum	70.38	0.00e+00	745.00
IUUC-Sre-115134	Sporisorium reilianum	33.04	2.00e-75	276.00
IUUC-Ssc-116260	Sus scrofa	42.83	2.00e-110	391.00
IUUC-Tgu-116533	Taeniopygia guttata	43.12	3.00e-110	391.00
IUUC-Tru-117800	Takifugu rubripes	41.15	4.00e-109	387.00
IUUC-Tsy-118980	Tarsius syrichta	40.57	1.00e-94	338.00
IUUC-Tni-120334	Tetraodon nigroviridis	39.83	9.00e-70	256.00
IUUC-Tca-121807	Theobroma cacao	68.73	0.00e+00	745.00
IUUC-Tre-121920	Trichoderma reesei	32.10	3.00e-61	228.00
IUUC-Tvi-122294	Trichoderma virens	31.99	2.00e-52	198.00
IUUC-Tae-125713	Triticum aestivum	85.15	0.00e+00	928.00
IUUC-Tur-126664	Triticum urartu	78.46	0.00e+00	905.00
IUUC-Tme-127026	Tuber melanosporum	35.86	1.00e-74	272.00
IUUC-Tbe-127582	Tupaia belangeri	41.97	6.00e-69	254.00
IUUC-Ttr-128313	Tursiops truncatus	43.02	4.00e-109	387.00
IUUC-Uma-129626	Ustilago maydis	34.77	2.00e-76	278.00
IUUC-Vda-129699	Verticillium dahliae	33.13	1.00e-60	226.00
IUUC-Vpa-130593	Vicugna pacos	43.57	7.00e-101	360.00
IUUC-Vvi-131668	Vitis vinifera	72.66	0.00e+00	793.00
IUUC-Xtr-132186	Xenopus tropicalis	43.58	9.00e-95	339.00
IUUC-Xma-133212	Xiphophorus maculatus	41.54	6.00e-107	380.00
IUUC-Yli-134607	Yarrowia lipolytica	58.46	2.00e-40	156.00
IUUC-Zma-135662	Zea mays	89.41	0.00e+00	952.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence