iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-16	57.5	380	414

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +++t++ f      l++ s+D t+k+WDlr+++++
   Q: 380  SEITSIVFsYMgQQLATRSNDETMKLWDLRQFKQP 414
           679999896334679999************99886 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MQRGKISFGK IKLNVNVPPA EPRSNETEAE DAKESTEASG NGGGFKKMDK EQMIRQIEDV 60
AEDLESQHLK EVMGISGFGR KAAKVFDINE QIEKARVTRP GMDKKREESK PKEDDQKDEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGACAGTCCG AATATAAACG GTCACTTAAT TCACTTGTTT ACAAAATATT TACCGCATAT 60
TTTCAGAGAA ATATAGTTTT AATTAAAAAT TTGAAAATCC ACTTAGCGTG GGGCCTTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0022008--P:neurogenesis

KEGG

dme:Dmel_CG5543

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000150	Aegilops tauschii	41.72	3.00e-105	375.00
IUUC-Aml-002098	Ailuropoda melanoleuca	46.67	1.00e-89	322.00
IUUC-Atr-002886	Amborella trichopoda	42.98	1.00e-105	376.00
IUUC-Apl-004059	Anas platyrhynchos	54.76	1.00e-140	492.00
IUUC-Aca-004427	Anolis carolinensis	55.08	9.00e-153	533.00
IUUC-Aly-006122	Arabidopsis lyrata	40.88	1.00e-97	350.00
IUUC-Ath-006952	Arabidopsis thaliana	41.09	4.00e-98	351.00
IUUC-Acl-008150	Aspergillus clavatus	29.62	2.00e-59	223.00
IUUC-Afl-008722	Aspergillus flavus	29.82	8.00e-58	217.00
IUUC-Afu-009003	Aspergillus fumigatus	29.03	1.00e-59	223.00
IUUC-Ani-009306	Aspergillus nidulans	29.37	1.00e-56	213.00
IUUC-Ang-009780	Aspergillus niger	27.97	5.00e-53	201.00
IUUC-Aor-010109	Aspergillus oryzae	30.02	2.00e-58	219.00
IUUC-Ate-010484	Aspergillus terreus	29.22	2.00e-56	213.00
IUUC-Ame-011248	Astyanax mexicanus	54.56	4.00e-154	537.00
IUUC-Bgr-012093	Blumeria graminis	30.44	7.00e-60	224.00
IUUC-Bta-013581	Bos taurus	50.93	2.00e-147	515.00
IUUC-Bci-013900	Botrytis cinerea	30.62	2.00e-58	219.00
IUUC-Bdi-014951	Brachypodium distachyon	41.93	4.00e-105	374.00
IUUC-Bol-016482	Brassica oleracea	40.37	3.00e-97	348.00
IUUC-Bra-016976	Brassica rapa	41.30	2.00e-98	352.00
IUUC-Cel-018229	Caenorhabditis elegans	37.32	1.00e-93	336.00
IUUC-Cja-019101	Callithrix jacchus	51.14	7.00e-147	513.00
IUUC-Cfa-020638	Canis familiaris	51.13	7.00e-148	516.00
IUUC-Cpo-022323	Cavia porcellus	50.52	3.00e-146	511.00
IUUC-Csa-023743	Chlorocebus sabaeus	51.14	3.00e-147	514.00
IUUC-Cho-024356	Choloepus hoffmanni	38.04	2.00e-58	219.00
IUUC-Cin-025151	Ciona intestinalis	46.27	3.00e-130	458.00
IUUC-Csv-025820	Ciona savignyi	47.55	3.00e-131	461.00
IUUC-Cgl-026404	Colletotrichum gloeosporioides	30.49	3.00e-60	225.00
IUUC-Cne-026790	Cryptococcus neoformans	36.97	8.00e-84	303.00
IUUC-Dno-029526	Dasypus novemcinctus	51.55	4.00e-148	517.00
IUUC-Dse-031347	Dothistroma septosporum	30.92	4.00e-61	228.00
IUUC-Ete-032851	Echinops telfairi	49.18	1.00e-82	299.00
IUUC-Fca-035931	Felis catus	50.72	9.00e-147	513.00
IUUC-Fal-037139	Ficedula albicollis	53.81	4.00e-150	524.00
IUUC-Fox-037696	Fusarium oxysporum	29.54	3.00e-56	212.00
IUUC-Fso-038349	Fusarium solani	28.77	3.00e-58	218.00
IUUC-Gmo-039027	Gadus morhua	53.83	5.00e-153	533.00
IUUC-Ggr-039982	Gaeumannomyces graminis	29.96	5.00e-49	187.00
IUUC-Gga-041080	Gallus gallus	54.96	3.00e-149	521.00
IUUC-Gac-041296	Gasterosteus aculeatus	54.14	1.00e-153	535.00
IUUC-Gma-044316	Glycine max	41.20	1.00e-102	366.00
IUUC-Ggo-045123	Gorilla gorilla	49.28	3.00e-136	477.00
IUUC-Hsa-046541	Homo sapiens	50.93	6.00e-147	513.00
IUUC-Itr-048403	Ictidomys tridecemlineatus	51.13	1.00e-147	516.00
IUUC-Lch-050163	Latimeria chalumnae	54.06	2.00e-149	521.00
IUUC-Lpe-051614	Leersia perrieri	42.37	1.00e-103	369.00
IUUC-Loc-052721	Lepisosteus oculatus	53.61	2.00e-153	535.00
IUUC-Lma-053034	Leptosphaeria maculans	32.40	5.00e-61	228.00
IUUC-Laf-053704	Loxodonta africana	51.34	7.00e-148	516.00
IUUC-Mcc-055688	Macaca mulatta	50.93	5.00e-147	513.00
IUUC-Mor-057275	Magnaporthe oryzae	29.64	3.00e-54	205.00
IUUC-Mpo-057450	Magnaporthe poae	29.88	2.00e-55	209.00
IUUC-Mtr-057970	Medicago truncatula	41.48	7.00e-102	363.00
IUUC-Mla-059172	Melampsora laricipopulina	38.03	8.00e-87	313.00
IUUC-Mvi-060266	Microbotryum violaceum	36.40	7.00e-87	313.00
IUUC-Mmr-061611	Microcebus murinus	51.45	4.00e-148	517.00
IUUC-Mdo-062609	Monodelphis domestica	54.23	5.00e-151	526.00
IUUC-Mmu-064354	Mus musculus	50.93	2.00e-147	514.00
IUUC-Mac-065632	Musa acuminata	42.56	4.00e-106	377.00
IUUC-Mpu-066749	Mustela putorius furo	50.93	1.00e-147	515.00
IUUC-Mlu-067579	Myotis lucifugus	51.34	4.00e-148	517.00
IUUC-Nfi-068556	Neosartorya fischeri	29.03	7.00e-60	224.00
IUUC-Ncr-068877	Neurospora crassa	29.45	1.00e-55	210.00
IUUC-Nle-069176	Nomascus leucogenys	51.14	4.00e-147	514.00
IUUC-Opr-070293	Ochotona princeps	50.62	2.00e-145	508.00
IUUC-Ont-071297	Oreochromis niloticus	54.62	4.00e-151	527.00
IUUC-Oan-073450	Ornithorhynchus anatinus	46.09	4.00e-26	109.00
IUUC-Ocu-074449	Oryctolagus cuniculus	50.72	8.00e-148	516.00
IUUC-Oba-075858	Oryza barthii	41.58	2.00e-102	365.00
IUUC-Obr-076052	Oryza brachyantha	41.60	2.00e-103	369.00
IUUC-Ogl-077756	Oryza glaberrima	41.82	2.00e-104	372.00
IUUC-Ogu-078993	Oryza glumaepatula	41.58	2.00e-102	366.00
IUUC-Oin-079429	Oryza indica	41.61	6.00e-104	370.00
IUUC-Olo-080823	Oryza longistaminata	42.09	5.00e-101	360.00
IUUC-Ome-081852	Oryza meridionalis	41.82	2.00e-104	372.00
IUUC-Oni-082474	Oryza nivara	41.37	8.00e-102	364.00
IUUC-Opu-083450	Oryza punctata	40.75	3.00e-97	349.00
IUUC-Oru-084642	Oryza rufipogon	41.58	1.00e-102	366.00
IUUC-Osa-086011	Oryza sativa	42.03	7.00e-106	377.00
IUUC-Ola-086398	Oryzias latipes	53.72	7.00e-152	530.00
IUUC-Olu-087769	Ostreococcus lucimarinus	33.81	2.00e-72	266.00
IUUC-Oga-088727	Otolemur garnettii	51.13	3.00e-147	514.00
IUUC-Oar-090392	Ovis aries	51.13	1.00e-147	515.00
IUUC-Ptr-090921	Pan troglodytes	50.93	5.00e-147	513.00
IUUC-Pan-092085	Papio anubis	51.63	9.00e-142	496.00
IUUC-Psi-093709	Pelodiscus sinensis	54.70	3.00e-148	518.00
IUUC-Pno-095050	Phaeosphaeria nodorum	30.52	3.00e-57	215.00
IUUC-Ppa-095333	Physcomitrella patens	42.14	1.00e-108	386.00
IUUC-Pfo-097401	Poecilia formosa	54.62	1.00e-151	529.00
IUUC-Pab-097766	Pongo abelii	51.14	1.00e-147	516.00
IUUC-Pop-099011	Populus trichocarpa	42.33	6.00e-104	370.00
IUUC-Pca-100351	Procavia capensis	39.54	9.00e-56	210.00
IUUC-Ppe-101384	Prunus persica	41.61	2.00e-104	372.00
IUUC-Pva-102654	Pteropus vampyrus	50.93	2.00e-147	514.00
IUUC-Pgr-103415	Puccinia graminis	38.38	1.00e-89	323.00
IUUC-Ptt-103925	Puccinia triticina	38.59	1.00e-91	329.00
IUUC-Pte-104394	Pyrenophora teres	30.60	1.00e-56	213.00
IUUC-Pyt-104674	Pyrenophora triticirepentis	30.40	3.00e-55	209.00
IUUC-Rno-105663	Rattus norvegicus	51.14	7.00e-148	516.00
IUUC-Sha-107567	Sarcophilus harrisii	53.40	1.00e-160	559.00
IUUC-Sja-107939	Schizosaccharomyces japonicus	28.91	5.00e-54	204.00
IUUC-Spo-108037	Schizosaccharomyces pombe	27.69	4.00e-46	178.00
IUUC-Ssl-108526	Sclerotinia sclerotiorum	29.96	8.00e-57	214.00
IUUC-Smo-108751	Selaginella moellendorffii	40.87	1.00e-106	380.00
IUUC-Sit-110170	Setaria italica	41.82	3.00e-104	371.00
IUUC-Sly-111518	Solanum lycopersicum	39.41	2.00e-89	322.00
IUUC-Stu-112755	Solanum tuberosum	42.14	1.00e-104	373.00
IUUC-Sar-113590	Sorex araneus	42.27	6.00e-107	380.00
IUUC-Sbi-114091	Sorghum bicolor	41.82	1.00e-104	373.00
IUUC-Sre-115111	Sporisorium reilianum	29.95	6.00e-43	167.00
IUUC-Ssc-115453	Sus scrofa	51.62	5.00e-142	496.00
IUUC-Tgu-117285	Taeniopygia guttata	53.99	3.00e-149	521.00
IUUC-Tru-118474	Takifugu rubripes	54.19	2.00e-149	521.00
IUUC-Tsy-119547	Tarsius syrichta	44.95	2.00e-122	432.00
IUUC-Tni-120818	Tetraodon nigroviridis	53.72	2.00e-151	528.00
IUUC-Tca-121621	Theobroma cacao	42.13	2.00e-105	375.00
IUUC-Tre-122146	Trichoderma reesei	28.77	1.00e-58	220.00
IUUC-Tvi-122353	Trichoderma virens	29.22	1.00e-58	219.00
IUUC-Tae-123385	Triticum aestivum	41.50	6.00e-76	277.00
IUUC-Tur-125971	Triticum urartu	42.42	2.00e-102	365.00
IUUC-Tme-127185	Tuber melanosporum	29.90	7.00e-52	197.00
IUUC-Tbe-127554	Tupaia belangeri	42.29	4.00e-57	215.00
IUUC-Ttr-128995	Tursiops truncatus	51.13	9.00e-148	516.00
IUUC-Uma-129618	Ustilago maydis	30.38	9.00e-48	184.00
IUUC-Vda-129832	Verticillium dahliae	28.63	1.00e-50	193.00
IUUC-Vpa-130592	Vicugna pacos	47.67	9.00e-72	263.00
IUUC-Vvi-131574	Vitis vinifera	43.27	2.00e-106	379.00
IUUC-Xtr-132234	Xenopus tropicalis	54.14	6.00e-152	530.00
IUUC-Xma-133780	Xiphophorus maculatus	54.29	1.00e-151	529.00
IUUC-Yli-134658	Yarrowia lipolytica	27.97	9.00e-11	60.80
IUUC-Zma-135697	Zea mays	41.74	9.00e-103	366.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence