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Tag Content
iUUCD ID IUUC-Ssc-116303
Ensembl Protein ID ENSSSCP00000003650.2
UniProt Accession F1RIM3; F1RIM3_PIG
Genbank Protein ID ENSSSCP00000003650
Protein Name Uncharacterized protein
Genbank Nucleotide ID FP102454
Gene Name CHD5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000003366.2 ENSSSCT00000003736.2 ENSSSCP00000003650.2
ENSSSCG00000003366.2 ENSSSCT00000019561.2 ENSSSCP00000019043.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 6.50e-17 61.7 276 321
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 276  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 321
           79*********....9******************.*******7.******86 PP
   
Organism Sus scrofa
Protein Sequence
(Fasta)
QGSNDELSEN EEDLEEKSES EGSDYSPNKK KKKKLKDKKE KKAKRKKKDD DEDDNDDGCL 60
KEPKSSGQLM AEWGLDDVDY LFSEADYHTL TNYKAFSQFL RPLIAKKNPK IPMSKMMTVL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ssc-116303|E3,PHD|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGGGGAGCA ATGATGAGCT GTCGGAAAAT GAAGAGGATC TGGAAGAGAA GTCAGAGAGC 60
GAGGGTAGTG ACTACTCCCC GAATAAAAAG AAGAAGAAAA AACTCAAGGA CAAGAAAGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-116303|E3,PHD|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N
SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD
Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001701 Ailuropoda melanoleuca 96.47 0.00e+00 2757.00
IUUC-Apl-003406 Anas platyrhynchos 83.54 0.00e+00 2102.00
IUUC-Aca-004671 Anolis carolinensis 82.29 0.00e+00 2431.00
IUUC-Aly-005645 Arabidopsis lyrata 39.43 2.00e-152 534.00
IUUC-Ath-007406 Arabidopsis thaliana 40.16 1.00e-157 551.00
IUUC-Ame-011883 Astyanax mexicanus 80.57 0.00e+00 2138.00
IUUC-Bta-012951 Bos taurus 90.69 0.00e+00 2364.00
IUUC-Bol-016073 Brassica oleracea 41.29 2.00e-157 551.00
IUUC-Bra-016724 Brassica rapa 41.52 2.00e-158 554.00
IUUC-Cel-018108 Caenorhabditis elegans 57.06 0.00e+00 1316.00
IUUC-Cja-018871 Callithrix jacchus 93.26 0.00e+00 2741.00
IUUC-Cfa-021063 Canis familiaris 97.35 0.00e+00 2680.00
IUUC-Cpo-022083 Cavia porcellus 94.03 0.00e+00 2659.00
IUUC-Csa-023084 Chlorocebus sabaeus 96.89 0.00e+00 2878.00
IUUC-Dme-032150 Drosophila melanogaster 61.00 0.00e+00 1421.00
IUUC-Eca-034372 Equus caballus 97.78 0.00e+00 2732.00
IUUC-Fca-036048 Felis catus 96.78 0.00e+00 2703.00
IUUC-Fal-037282 Ficedula albicollis 88.26 0.00e+00 2533.00
IUUC-Gga-040607 Gallus gallus 88.22 0.00e+00 2247.00
IUUC-Ggo-044514 Gorilla gorilla 96.77 0.00e+00 2860.00
IUUC-Hsa-046181 Homo sapiens 96.83 0.00e+00 2842.00
IUUC-Loc-052795 Lepisosteus oculatus 79.68 0.00e+00 2410.00
IUUC-Laf-053749 Loxodonta africana 96.94 0.00e+00 2793.00
IUUC-Mcc-055856 Macaca mulatta 96.89 0.00e+00 2877.00
IUUC-Mga-059630 Meleagris gallopavo 88.44 0.00e+00 2541.00
IUUC-Mmr-060986 Microcebus murinus 94.73 0.00e+00 2689.00
IUUC-Mmu-063644 Mus musculus 95.32 0.00e+00 2762.00
IUUC-Mpu-066528 Mustela putorius furo 96.22 0.00e+00 2482.00
IUUC-Nle-069824 Nomascus leucogenys 93.74 0.00e+00 2613.00
IUUC-Ola-086961 Oryzias latipes 74.12 0.00e+00 2193.00
IUUC-Oga-088775 Otolemur garnettii 96.71 0.00e+00 2763.00
IUUC-Oar-090301 Ovis aries 96.95 0.00e+00 2678.00
IUUC-Ptr-090586 Pan troglodytes 94.55 0.00e+00 2796.00
IUUC-Pan-092282 Papio anubis 96.95 0.00e+00 2877.00
IUUC-Psi-093007 Pelodiscus sinensis 86.96 0.00e+00 2339.00
IUUC-Pfo-096802 Poecilia formosa 76.56 0.00e+00 2259.00
IUUC-Pab-097677 Pongo abelii 98.31 0.00e+00 2497.00
IUUC-Pca-100559 Procavia capensis 92.73 0.00e+00 2600.00
IUUC-Rno-105378 Rattus norvegicus 94.59 0.00e+00 2711.00
IUUC-Sha-107350 Sarcophilus harrisii 85.99 0.00e+00 2529.00
IUUC-Smo-108946 Selaginella moellendorffii 36.85 1.00e-165 578.00
IUUC-Tgu-116779 Taeniopygia guttata 81.55 0.00e+00 2324.00
IUUC-Tru-117597 Takifugu rubripes 77.31 0.00e+00 2274.00
IUUC-Ttr-128301 Tursiops truncatus 95.21 0.00e+00 2750.00
Created Date 25-Jun-2017

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