iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048001

Ensembl Protein ID

ENSSTOP00000009459.2

UniProt Accession

I3MFP4; I3MFP4_ICTTR

Genbank Protein ID

ENSSTOP00000009459

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01020105

Gene Name

WDR34

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000010534.2	ENSSTOT00000010540.2	ENSSTOP00000009459.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-21	73.5	470	501

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           ++v+cl+f   ++ ll++G   gt+kvW l+t
   Q: 470  SPVYCLEFnsqQTQLLAAGDAKGTVKVWQLST 501
           79******974338899999********9877 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

GKRGAAVLAT GGAASAEGPG RPGPLQDETL GVASVPSQWR GIQGIRGETK GCQTASIATA 60
DASVQARKQA DAQVQTEAPV PVTVLPMSQH DTSRLATFLR RVEAMVIREL NKNWQSHAFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAAGCGCG GAGCTGCGGT GCTGGCGACA GGCGGGGCTG CGAGCGCCGA GGGGCCCGGG 60
CGCCCGGGGC CGCTGCAGGA CGAGACCCTG GGCGTGGCGT CGGTGCCCTC GCAATGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0005829--C:cytosol
GO:0060271--P:cilium assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002326	Ailuropoda melanoleuca	87.03	0.00e+00	863.00
IUUC-Apl-004015	Anas platyrhynchos	68.50	0.00e+00	626.00
IUUC-Ame-010762	Astyanax mexicanus	52.01	4.00e-144	504.00
IUUC-Bta-013392	Bos taurus	84.75	0.00e+00	889.00
IUUC-Cja-019374	Callithrix jacchus	85.38	0.00e+00	850.00
IUUC-Cfa-020365	Canis familiaris	87.72	0.00e+00	837.00
IUUC-Csa-023810	Chlorocebus sabaeus	86.36	0.00e+00	892.00
IUUC-Cho-024515	Choloepus hoffmanni	79.14	2.00e-166	578.00
IUUC-Cin-025690	Ciona intestinalis	29.10	4.00e-57	215.00
IUUC-Csv-026220	Ciona savignyi	29.71	2.00e-52	199.00
IUUC-Dre-028439	Danio rerio	51.30	1.00e-143	503.00
IUUC-Dno-029916	Dasypus novemcinctus	86.34	0.00e+00	876.00
IUUC-Dor-030853	Dipodomys ordii	85.85	0.00e+00	917.00
IUUC-Eca-033204	Equus caballus	86.08	0.00e+00	816.00
IUUC-Eeu-035352	Erinaceus europaeus	26.32	4.00e-24	106.00
IUUC-Fca-036470	Felis catus	87.73	0.00e+00	847.00
IUUC-Fal-037484	Ficedula albicollis	63.38	0.00e+00	639.00
IUUC-Gmo-039252	Gadus morhua	49.80	3.00e-136	478.00
IUUC-Gga-040701	Gallus gallus	64.66	9.00e-171	593.00
IUUC-Gac-041440	Gasterosteus aculeatus	50.10	4.00e-135	474.00
IUUC-Ggo-044509	Gorilla gorilla	86.68	0.00e+00	845.00
IUUC-Hsa-046030	Homo sapiens	86.76	0.00e+00	850.00
IUUC-Lch-050603	Latimeria chalumnae	58.52	5.00e-167	580.00
IUUC-Loc-052914	Lepisosteus oculatus	51.16	2.00e-126	446.00
IUUC-Laf-053957	Loxodonta africana	81.40	0.00e+00	704.00
IUUC-Mcc-054805	Macaca mulatta	85.97	0.00e+00	892.00
IUUC-Meu-056115	Macropus eugenii	80.16	0.00e+00	827.00
IUUC-Mga-059377	Meleagris gallopavo	65.68	0.00e+00	631.00
IUUC-Mmr-061203	Microcebus murinus	88.51	0.00e+00	893.00
IUUC-Mdo-062646	Monodelphis domestica	80.56	0.00e+00	805.00
IUUC-Mmu-063156	Mus musculus	86.23	0.00e+00	853.00
IUUC-Mpu-065923	Mustela putorius furo	82.65	0.00e+00	829.00
IUUC-Mlu-067705	Myotis lucifugus	87.92	0.00e+00	904.00
IUUC-Nle-069635	Nomascus leucogenys	86.43	0.00e+00	806.00
IUUC-Opr-070939	Ochotona princeps	70.33	7.00e-153	533.00
IUUC-Ont-072205	Oreochromis niloticus	48.61	6.00e-128	450.00
IUUC-Oan-073427	Ornithorhynchus anatinus	73.96	0.00e+00	699.00
IUUC-Ocu-074234	Oryctolagus cuniculus	86.42	0.00e+00	878.00
IUUC-Ola-086461	Oryzias latipes	50.00	5.00e-134	471.00
IUUC-Oga-088616	Otolemur garnettii	88.49	0.00e+00	714.00
IUUC-Ptr-090563	Pan troglodytes	86.76	0.00e+00	851.00
IUUC-Pan-092105	Papio anubis	86.44	0.00e+00	874.00
IUUC-Psi-093169	Pelodiscus sinensis	65.31	0.00e+00	671.00
IUUC-Pma-094688	Petromyzon marinus	38.17	2.00e-89	322.00
IUUC-Pfo-096136	Poecilia formosa	50.40	3.00e-121	428.00
IUUC-Pab-098286	Pongo abelii	85.77	0.00e+00	855.00
IUUC-Pca-100577	Procavia capensis	78.20	0.00e+00	791.00
IUUC-Pva-103194	Pteropus vampyrus	87.88	0.00e+00	940.00
IUUC-Rno-105958	Rattus norvegicus	85.77	0.00e+00	863.00
IUUC-Sha-107438	Sarcophilus harrisii	81.86	0.00e+00	809.00
IUUC-Ssc-116210	Sus scrofa	82.63	0.00e+00	870.00
IUUC-Tgu-116704	Taeniopygia guttata	63.95	0.00e+00	644.00
IUUC-Tru-117530	Takifugu rubripes	48.60	2.00e-128	452.00
IUUC-Tni-120848	Tetraodon nigroviridis	46.39	8.00e-110	390.00
IUUC-Ttr-128697	Tursiops truncatus	75.15	0.00e+00	771.00
IUUC-Xtr-132843	Xenopus tropicalis	59.52	1.00e-174	605.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence