iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048162

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01091227

Gene Name

TRIM38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000015820.2	ENSSTOT00000015824.2	ENSSTOP00000014164.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-08	32.7	16	62

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C+iC++ + + p++ +CgH ++ +Cl  w    +     +k+f+CPlC+
   Q: 16   CPICMNLMTR-PVTISCGHSYCSTCL-PWsynTQNLLGWQKSFHCPLCQ 62
           **********.999***********8.4444434446689********7 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MAFASFTKKM KEIATCPICM NLMTRPVTIS CGHSYCSTCL PWSYNTQNLL GWQKSFHCPL 60
CQVSLPVTNY GSNKVLENLL EVIGEMDLEQ LCGEHGEQLH LFCENEGQLI CWRCERAPAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTTTG CCTCATTCAC AAAGAAGATG AAAGAAATAG CCACCTGCCC CATCTGCATG 60
AACCTGATGA CCCGTCCTGT GACCATCAGC TGTGGGCACA GCTACTGCAG CACGTGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0004871--F:signal transducer activity
GO:0008270--F:zinc ion binding
GO:0050687--P:negative regulation of defense response to virus
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0046598--P:positive regulation of viral entry into host cell
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070936--P:protein K48-linked ubiquitination
GO:0032648--P:regulation of interferon-beta production

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001649	Ailuropoda melanoleuca	61.56	1.00e-155	542.00
IUUC-Bta-012574	Bos taurus	61.18	5.00e-155	540.00
IUUC-Cja-019759	Callithrix jacchus	61.85	9.00e-143	499.00
IUUC-Cfa-020431	Canis familiaris	56.28	1.00e-140	492.00
IUUC-Cpo-021914	Cavia porcellus	60.63	4.00e-148	517.00
IUUC-Csa-023320	Chlorocebus sabaeus	60.09	1.00e-152	532.00
IUUC-Cho-024964	Choloepus hoffmanni	61.23	8.00e-99	353.00
IUUC-Dno-029741	Dasypus novemcinctus	57.33	2.00e-143	502.00
IUUC-Dor-030298	Dipodomys ordii	54.76	4.00e-81	294.00
IUUC-Ete-032493	Echinops telfairi	54.96	6.00e-136	477.00
IUUC-Eca-033962	Equus caballus	61.39	1.00e-151	529.00
IUUC-Eeu-035228	Erinaceus europaeus	62.10	7.00e-100	357.00
IUUC-Fca-036349	Felis catus	59.96	2.00e-150	525.00
IUUC-Ggo-044493	Gorilla gorilla	61.26	1.00e-156	545.00
IUUC-Hsa-046161	Homo sapiens	60.82	1.00e-155	542.00
IUUC-Laf-054150	Loxodonta africana	59.96	8.00e-152	530.00
IUUC-Mcc-055076	Macaca mulatta	59.87	2.00e-152	531.00
IUUC-Mmu-063517	Mus musculus	50.43	9.00e-124	436.00
IUUC-Mpu-065752	Mustela putorius furo	60.74	1.00e-154	539.00
IUUC-Mlu-067758	Myotis lucifugus	51.26	6.00e-110	391.00
IUUC-Nle-069117	Nomascus leucogenys	61.90	9.00e-158	549.00
IUUC-Opr-071144	Ochotona princeps	57.79	8.00e-148	516.00
IUUC-Ocu-074825	Oryctolagus cuniculus	57.58	6.00e-148	516.00
IUUC-Oga-088744	Otolemur garnettii	56.38	3.00e-82	298.00
IUUC-Oar-089951	Ovis aries	61.18	8.00e-155	539.00
IUUC-Ptr-090519	Pan troglodytes	60.82	8.00e-156	543.00
IUUC-Pan-092059	Papio anubis	59.87	5.00e-153	533.00
IUUC-Pab-098747	Pongo abelii	61.90	1.00e-157	549.00
IUUC-Pca-100294	Procavia capensis	56.56	7.00e-142	496.00
IUUC-Pva-102129	Pteropus vampyrus	57.08	4.00e-145	507.00
IUUC-Sar-113760	Sorex araneus	53.46	6.00e-122	430.00
IUUC-Tsy-119422	Tarsius syrichta	58.70	2.00e-140	492.00
IUUC-Ttr-129039	Tursiops truncatus	61.17	3.00e-156	544.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence