iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111878

Ensembl Protein ID

Solyc12g021290.1.1

UniProt Accession

K4DDP8; K4DDP8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g021290.1	Solyc12g021290.1.1	Solyc12g021290.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-19	70.4	130	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gHt++++ ++f  +++ ++s+s Dgt+++W 
   Q: 130  GHTSPISRCRFsaTGDNVASASVDGTVRIWT 160
           8***********765889************6 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVSRLKGDIK QLNFKLAQLQ VSLEEKETQL HQLRSSLLAT EVIVGTDSSS NLLAGSGEPT 60
VFVPASSHVN CVSASAQAGE REPKHSEDIK PDDTQVSTSK ISNHSDTEND AQREEEFPEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAGTC GCCTCAAAGG AGACATCAAG CAGCTTAATT TCAAACTTGC GCAACTTCAA 60
GTGTCTTTGG AGGAGAAAGA GACTCAGCTG CATCAGTTAA GGAGGTGACA GCTGTTACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000967	Aegilops tauschii	54.57	8.00e-124	436.00
IUUC-Aml-002391	Ailuropoda melanoleuca	30.55	2.00e-41	163.00
IUUC-Atr-002487	Amborella trichopoda	64.14	3.00e-164	571.00
IUUC-Apl-003180	Anas platyrhynchos	31.38	9.00e-43	167.00
IUUC-Aca-004864	Anolis carolinensis	30.46	2.00e-43	170.00
IUUC-Ame-011815	Astyanax mexicanus	30.12	3.00e-42	166.00
IUUC-Bta-012663	Bos taurus	31.30	5.00e-41	162.00
IUUC-Bdi-014897	Brachypodium distachyon	77.22	2.00e-83	300.00
IUUC-Cja-019999	Callithrix jacchus	31.12	2.00e-42	166.00
IUUC-Cfa-020220	Canis familiaris	30.55	1.00e-40	160.00
IUUC-Cpo-021382	Cavia porcellus	32.09	2.00e-41	163.00
IUUC-Csa-024167	Chlorocebus sabaeus	31.12	5.00e-42	165.00
IUUC-Cho-024992	Choloepus hoffmanni	28.62	4.00e-25	109.00
IUUC-Cin-025476	Ciona intestinalis	27.80	2.00e-23	103.00
IUUC-Csv-026327	Ciona savignyi	27.83	2.00e-21	96.30
IUUC-Dre-028313	Danio rerio	32.18	3.00e-44	172.00
IUUC-Dno-029310	Dasypus novemcinctus	29.10	2.00e-24	107.00
IUUC-Dor-030829	Dipodomys ordii	30.53	4.00e-17	82.40
IUUC-Eca-033365	Equus caballus	30.84	3.00e-41	162.00
IUUC-Eeu-035105	Erinaceus europaeus	25.94	2.00e-28	120.00
IUUC-Fca-036235	Felis catus	30.84	1.00e-41	164.00
IUUC-Fal-037261	Ficedula albicollis	31.12	1.00e-42	167.00
IUUC-Gmo-038615	Gadus morhua	30.99	5.00e-37	148.00
IUUC-Gga-040964	Gallus gallus	29.38	1.00e-43	171.00
IUUC-Gac-042279	Gasterosteus aculeatus	32.06	2.00e-42	166.00
IUUC-Gma-044040	Glycine max	66.45	5.00e-167	580.00
IUUC-Ggo-045182	Gorilla gorilla	31.12	5.00e-42	165.00
IUUC-Hsa-046466	Homo sapiens	31.12	4.00e-42	166.00
IUUC-Hvu-047786	Hordeum vulgare	75.14	9.00e-79	285.00
IUUC-Itr-048100	Ictidomys tridecemlineatus	29.76	4.00e-42	165.00
IUUC-Lpe-051583	Leersia perrieri	60.92	4.00e-113	400.00
IUUC-Loc-051750	Lepisosteus oculatus	30.10	1.00e-42	167.00
IUUC-Laf-054030	Loxodonta africana	33.24	1.00e-42	167.00
IUUC-Mcc-055794	Macaca mulatta	31.12	5.00e-42	165.00
IUUC-Meu-056775	Macropus eugenii	27.47	8.00e-23	101.00
IUUC-Mtr-058260	Medicago truncatula	65.93	6.00e-164	569.00
IUUC-Mga-060166	Meleagris gallopavo	29.88	2.00e-44	173.00
IUUC-Mmr-061054	Microcebus murinus	31.12	5.00e-43	168.00
IUUC-Mdo-061860	Monodelphis domestica	30.84	1.00e-40	160.00
IUUC-Mmu-063660	Mus musculus	31.41	9.00e-41	161.00
IUUC-Mac-065193	Musa acuminata	65.59	1.00e-172	599.00
IUUC-Mpu-066746	Mustela putorius furo	31.70	1.00e-41	164.00
IUUC-Mlu-068156	Myotis lucifugus	30.84	6.00e-42	165.00
IUUC-Nle-069065	Nomascus leucogenys	31.12	3.00e-42	166.00
IUUC-Opr-070438	Ochotona princeps	31.76	6.00e-42	165.00
IUUC-Ont-072085	Oreochromis niloticus	32.48	5.00e-43	168.00
IUUC-Oan-073049	Ornithorhynchus anatinus	26.35	9.00e-18	84.70
IUUC-Ocu-074114	Oryctolagus cuniculus	30.99	8.00e-41	161.00
IUUC-Oba-075720	Oryza barthii	55.98	6.00e-128	450.00
IUUC-Obr-076720	Oryza brachyantha	63.86	3.00e-155	541.00
IUUC-Ogl-077157	Oryza glaberrima	75.56	1.00e-81	294.00
IUUC-Ogu-079035	Oryza glumaepatula	63.21	6.00e-154	536.00
IUUC-Oin-079408	Oryza indica	63.88	2.00e-160	558.00
IUUC-Olo-080955	Oryza longistaminata	55.20	5.00e-128	451.00
IUUC-Ome-081897	Oryza meridionalis	56.98	9.00e-130	456.00
IUUC-Oni-082460	Oryza nivara	56.11	6.00e-128	450.00
IUUC-Opu-083172	Oryza punctata	62.98	3.00e-152	531.00
IUUC-Oru-085200	Oryza rufipogon	56.11	1.00e-127	449.00
IUUC-Ola-086613	Oryzias latipes	32.56	1.00e-36	147.00
IUUC-Oga-088368	Otolemur garnettii	30.84	1.00e-41	164.00
IUUC-Oar-089425	Ovis aries	30.68	3.00e-41	162.00
IUUC-Ptr-091643	Pan troglodytes	31.12	4.00e-42	165.00
IUUC-Pan-092395	Papio anubis	30.95	4.00e-41	162.00
IUUC-Psi-093924	Pelodiscus sinensis	29.59	5.00e-42	165.00
IUUC-Pma-094283	Petromyzon marinus	32.65	2.00e-37	150.00
IUUC-Pfo-097225	Poecilia formosa	31.67	2.00e-43	169.00
IUUC-Pab-097993	Pongo abelii	31.12	4.00e-42	165.00
IUUC-Pop-099660	Populus trichocarpa	78.89	3.00e-164	571.00
IUUC-Pca-100904	Procavia capensis	31.30	5.00e-42	165.00
IUUC-Ppe-101828	Prunus persica	63.24	1.00e-126	446.00
IUUC-Pva-102708	Pteropus vampyrus	29.45	1.00e-26	114.00
IUUC-Rno-105110	Rattus norvegicus	30.84	1.00e-40	160.00
IUUC-Sha-107527	Sarcophilus harrisii	27.91	4.00e-42	165.00
IUUC-Smo-108782	Selaginella moellendorffii	50.31	3.00e-85	308.00
IUUC-Sit-109793	Setaria italica	76.11	2.00e-83	300.00
IUUC-Sbi-113923	Sorghum bicolor	76.11	4.00e-83	299.00
IUUC-Ssc-115303	Sus scrofa	30.84	3.00e-41	162.00
IUUC-Tgu-117221	Taeniopygia guttata	29.14	1.00e-28	120.00
IUUC-Tru-117613	Takifugu rubripes	31.86	5.00e-42	165.00
IUUC-Tsy-119336	Tarsius syrichta	28.16	1.00e-25	111.00
IUUC-Tni-120800	Tetraodon nigroviridis	32.45	4.00e-42	165.00
IUUC-Tca-121607	Theobroma cacao	81.98	2.00e-167	582.00
IUUC-Tae-125353	Triticum aestivum	62.30	2.00e-152	531.00
IUUC-Tur-126358	Triticum urartu	50.47	5.00e-96	344.00
IUUC-Tbe-128121	Tupaia belangeri	31.88	2.00e-42	166.00
IUUC-Ttr-128704	Tursiops truncatus	31.12	2.00e-42	167.00
IUUC-Vvi-131495	Vitis vinifera	66.67	7.00e-170	590.00
IUUC-Xtr-132097	Xenopus tropicalis	30.42	4.00e-41	162.00
IUUC-Xma-134237	Xiphophorus maculatus	30.95	3.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence