iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121251

Ensembl Protein ID

EOX97705

UniProt Accession

A0A061DYF9; A0A061DYF9_THECC

Genbank Protein ID

EOX97705.1

Protein Name

26S proteasome non-ATPase regulatory subunit 4

Genbank Nucleotide ID

CM001880

Gene Name

TCM_006649

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_006649	EOX97705	EOX97705

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	1.10e-06	28.8	320	335
UBD/Alpha-Helix/UIM	7.4e-05	13.5	226	241

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 2    EdeeLqlAlalSlqEe 17
           +d eL+lAl++S+qE 
   Q: 320  DDKELALALQMSMQES 335
           788************7 PP

UBD/Alpha-Helix/UIM

   S: 3    deeLqlAlalSlqEee 18
           d+eL+lAl++S++Ee+
   Q: 226  DPELALALRVSMEEER 241
           89************97 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVLEATMICI DNSEWMRNGD YSPSRFQAQS DAVSLICGAK TQSNPENTVG ILTMAGKGVR 60
VVATPTSDLG KILSCMHGLE MGGEMNLAAG IQIAQLALKH RQNKNQQQRI IVFAGSPVKY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTTAAATT TCCCTGGGTG AACAACAAAA ACCGACAAGG CAAAGCAAAC ATTTGATTTC 60
TACTAGATTT CTTTTCTTCG CTTCCAAGCC TACTCTCTCT TAGCATTTGC AACCATGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0647--Proteasome
KW-1185--Reference proteome

Interpro

IPR027040--Proteasome_su_Rpn10
IPR003903--UIM_dom
IPR002035--VWF_A

PROSITE

PS50330--UIM
PS50234--VWFA

Pfam

PF02809--UIM
PF13519--VWA_2

SMART

SM00726--UIM
SM00327--VWA

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0008540--C:proteasome regulatory particle, base subcomplex
GO:0001653--F:peptide receptor activity
GO:0006974--P:cellular response to DNA damage stimulus
GO:0010150--P:leaf senescence
GO:0009555--P:pollen development
GO:0048528--P:post-embryonic root development
GO:0043248--P:proteasome assembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010029--P:regulation of seed germination
GO:0009737--P:response to abscisic acid
GO:0009733--P:response to auxin
GO:0009735--P:response to cytokinin
GO:0009408--P:response to heat
GO:0051788--P:response to misfolded protein
GO:0009651--P:response to salt stress
GO:0009744--P:response to sucrose
GO:0048767--P:root hair elongation
GO:0048455--P:stamen formation

KEGG

tcc:TCM_006649

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001241	Ailuropoda melanoleuca	40.55	9.00e-68	249.00
IUUC-Apl-003881	Anas platyrhynchos	47.32	5.00e-52	196.00
IUUC-Aca-004397	Anolis carolinensis	50.21	4.00e-61	226.00
IUUC-Aly-005564	Arabidopsis lyrata	70.28	2.00e-119	421.00
IUUC-Ath-007436	Arabidopsis thaliana	70.23	2.00e-118	417.00
IUUC-Ame-011018	Astyanax mexicanus	39.25	5.00e-68	250.00
IUUC-Bta-013066	Bos taurus	39.80	4.00e-68	251.00
IUUC-Bdi-014537	Brachypodium distachyon	67.99	7.00e-117	412.00
IUUC-Bol-015474	Brassica oleracea	69.82	2.00e-115	408.00
IUUC-Bra-018039	Brassica rapa	70.08	6.00e-116	409.00
IUUC-Cel-018187	Caenorhabditis elegans	41.56	2.00e-43	168.00
IUUC-Cja-019738	Callithrix jacchus	41.29	9.00e-68	249.00
IUUC-Cfa-020362	Canis familiaris	40.55	7.00e-68	249.00
IUUC-Cpo-021297	Cavia porcellus	39.44	1.00e-63	237.00
IUUC-Cho-024800	Choloepus hoffmanni	49.37	7.00e-20	90.50
IUUC-Cin-025469	Ciona intestinalis	37.24	9.00e-51	192.00
IUUC-Csv-026297	Ciona savignyi	38.01	2.00e-58	218.00
IUUC-Dre-028708	Danio rerio	40.74	3.00e-64	238.00
IUUC-Dno-029528	Dasypus novemcinctus	41.29	9.00e-68	249.00
IUUC-Dor-030255	Dipodomys ordii	39.59	8.00e-62	229.00
IUUC-Dme-032000	Drosophila melanogaster	40.10	3.00e-66	244.00
IUUC-Ete-032762	Echinops telfairi	41.04	1.00e-67	249.00
IUUC-Eca-034399	Equus caballus	40.25	4.00e-64	239.00
IUUC-Eeu-035072	Erinaceus europaeus	36.26	1.00e-43	169.00
IUUC-Fca-035993	Felis catus	39.95	7.00e-62	230.00
IUUC-Fal-037623	Ficedula albicollis	32.74	1.00e-43	169.00
IUUC-Gmo-038712	Gadus morhua	38.56	4.00e-62	232.00
IUUC-Gga-040288	Gallus gallus	40.05	2.00e-68	251.00
IUUC-Gac-041309	Gasterosteus aculeatus	37.82	3.00e-61	229.00
IUUC-Ggo-044628	Gorilla gorilla	41.29	9.00e-68	249.00
IUUC-Hsa-045850	Homo sapiens	41.79	3.00e-69	254.00
IUUC-Hvu-047715	Hordeum vulgare	80.00	5.00e-98	350.00
IUUC-Itr-048388	Ictidomys tridecemlineatus	39.39	4.00e-64	237.00
IUUC-Lch-050472	Latimeria chalumnae	39.49	2.00e-63	236.00
IUUC-Laf-053504	Loxodonta africana	40.30	6.00e-68	250.00
IUUC-Mcc-054877	Macaca mulatta	40.80	9.00e-68	249.00
IUUC-Meu-056114	Macropus eugenii	41.54	2.00e-68	252.00
IUUC-Mla-059105	Melampsora laricipopulina	46.67	8.00e-25	106.00
IUUC-Mga-059537	Meleagris gallopavo	40.20	1.00e-68	252.00
IUUC-Mmr-061736	Microcebus murinus	39.55	6.00e-67	247.00
IUUC-Mdo-062403	Monodelphis domestica	40.20	3.00e-62	232.00
IUUC-Mmu-063937	Mus musculus	40.55	4.00e-67	247.00
IUUC-Mpu-065901	Mustela putorius furo	40.55	7.00e-68	249.00
IUUC-Mlu-067994	Myotis lucifugus	41.54	2.00e-69	255.00
IUUC-Ncr-068760	Neurospora crassa	47.28	2.00e-54	205.00
IUUC-Nle-069463	Nomascus leucogenys	41.29	1.00e-67	249.00
IUUC-Opr-070298	Ochotona princeps	41.04	2.00e-68	251.00
IUUC-Ont-072030	Oreochromis niloticus	41.79	4.00e-68	250.00
IUUC-Ocu-074141	Oryctolagus cuniculus	40.80	2.00e-68	251.00
IUUC-Ogu-078986	Oryza glumaepatula	79.75	6.00e-93	333.00
IUUC-Ola-086325	Oryzias latipes	40.05	3.00e-62	232.00
IUUC-Oga-088882	Otolemur garnettii	39.95	3.00e-62	231.00
IUUC-Oar-089311	Ovis aries	40.05	8.00e-69	253.00
IUUC-Ptr-090931	Pan troglodytes	41.79	3.00e-69	254.00
IUUC-Pan-092286	Papio anubis	41.79	3.00e-69	254.00
IUUC-Psi-093908	Pelodiscus sinensis	36.79	4.00e-60	224.00
IUUC-Pma-094737	Petromyzon marinus	40.54	2.00e-61	228.00
IUUC-Ppa-095749	Physcomitrella patens	58.03	5.00e-106	376.00
IUUC-Pfo-096593	Poecilia formosa	39.07	1.00e-66	246.00
IUUC-Pab-097708	Pongo abelii	40.97	5.00e-64	237.00
IUUC-Pop-099138	Populus trichocarpa	78.46	5.00e-148	516.00
IUUC-Pca-100722	Procavia capensis	47.92	7.00e-27	114.00
IUUC-Ppe-101877	Prunus persica	76.96	3.00e-155	540.00
IUUC-Pva-103185	Pteropus vampyrus	40.05	2.00e-67	248.00
IUUC-Pte-104114	Pyrenophora teres	44.78	8.00e-51	192.00
IUUC-Pyt-104662	Pyrenophora triticirepentis	46.41	1.00e-54	205.00
IUUC-Rno-104906	Rattus norvegicus	41.04	1.00e-68	253.00
IUUC-Sha-106574	Sarcophilus harrisii	40.74	6.00e-67	246.00
IUUC-Sja-107706	Schizosaccharomyces japonicus	49.78	7.00e-53	199.00
IUUC-Spo-108378	Schizosaccharomyces pombe	45.13	7.00e-53	199.00
IUUC-Smo-109108	Selaginella moellendorffii	62.50	2.00e-109	388.00
IUUC-Sar-113015	Sorex araneus	50.30	2.00e-45	175.00
IUUC-Ssc-116142	Sus scrofa	40.80	6.00e-69	253.00
IUUC-Tru-118224	Takifugu rubripes	40.93	5.00e-68	250.00
IUUC-Tsy-119004	Tarsius syrichta	39.00	2.00e-44	172.00
IUUC-Tni-120074	Tetraodon nigroviridis	40.35	4.00e-68	250.00
IUUC-Tre-122168	Trichoderma reesei	50.21	4.00e-59	220.00
IUUC-Tvi-122655	Trichoderma virens	47.08	3.00e-52	197.00
IUUC-Tur-126420	Triticum urartu	79.58	1.00e-97	348.00
IUUC-Tbe-128080	Tupaia belangeri	40.30	1.00e-65	242.00
IUUC-Ttr-128811	Tursiops truncatus	41.29	9.00e-68	249.00
IUUC-Vda-129920	Verticillium dahliae	48.33	2.00e-48	184.00
IUUC-Vpa-130762	Vicugna pacos	54.95	8.00e-35	140.00
IUUC-Xtr-131967	Xenopus tropicalis	37.13	2.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence