iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039904

Ensembl Protein ID

GGTG_00454T0

UniProt Accession

J3NGR5; J3NGR5_GAGT3

Genbank Protein ID

EJT80455.1

Protein Name

WD repeat-containing protein

Genbank Nucleotide ID

ADBI01000045

Gene Name

GGTG_00454

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_00454	GGTG_00454T0	GGTG_00454T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-16	58.3	440	474

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf...sd..tllvsGsdDgtikvWDlrt 32
           ++sv +++f   ++  + ++++s+Dg ++vWDlr+
   Q: 440  NGSVKSIRFqpgQGagNVVATSSRDGLVQVWDLRC 474
           57899*****88335589**************985 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MGMGQAPGPR KSDLPVPTPS SPTTLPDNRH YQRSAQPTLL SFSRNCRLEY HLYVHVPTSV 60
IWAVEMRHPT PPNSSPLCVK RSVTWAPVVH VDTPEESDNL DAWPTLELPL TPRRPRALGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCCCGATA AGCCTAGGGT GGGCCTCTGA TAAAGCTTGG CCTCAATTGA CGCGCGCGGA 60
GTGGCGCCAA GAAAGCACTT AAAGCTGTGG GGCAACACGG GGCTGTTGCT CGCGTCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002111	Ailuropoda melanoleuca	25.54	6.00e-18	84.30
IUUC-Apl-004088	Anas platyrhynchos	23.79	5.00e-18	84.70
IUUC-Aca-004732	Anolis carolinensis	25.23	6.00e-18	84.30
IUUC-Aly-005686	Arabidopsis lyrata	24.23	5.00e-16	77.40
IUUC-Ath-006970	Arabidopsis thaliana	24.74	2.00e-16	79.30
IUUC-Acl-008219	Aspergillus clavatus	40.48	2.00e-89	321.00
IUUC-Afl-008558	Aspergillus flavus	40.52	3.00e-27	114.00
IUUC-Afu-008784	Aspergillus fumigatus	38.65	5.00e-86	310.00
IUUC-Ani-009304	Aspergillus nidulans	39.40	3.00e-91	327.00
IUUC-Ang-009842	Aspergillus niger	36.69	1.00e-88	318.00
IUUC-Aor-009883	Aspergillus oryzae	37.59	5.00e-89	320.00
IUUC-Ate-010454	Aspergillus terreus	39.78	4.00e-50	190.00
IUUC-Ame-010949	Astyanax mexicanus	25.17	3.00e-20	92.00
IUUC-Bta-012333	Bos taurus	25.38	8.00e-18	84.00
IUUC-Bci-013733	Botrytis cinerea	36.32	4.00e-91	327.00
IUUC-Bdi-014494	Brachypodium distachyon	25.96	8.00e-17	80.10
IUUC-Bol-015301	Brassica oleracea	26.29	2.00e-20	92.00
IUUC-Bra-017691	Brassica rapa	27.32	7.00e-22	97.10
IUUC-Cel-018498	Caenorhabditis elegans	23.80	1.00e-20	93.20
IUUC-Cja-019534	Callithrix jacchus	25.22	2.00e-17	82.40
IUUC-Cfa-020847	Canis familiaris	25.54	5.00e-18	84.70
IUUC-Cpo-021695	Cavia porcellus	25.40	1.00e-16	80.10
IUUC-Cre-022762	Chlamydomonas reinhardtii	28.77	6.00e-11	62.80
IUUC-Csa-023748	Chlorocebus sabaeus	25.11	2.00e-17	83.20
IUUC-Cho-024445	Choloepus hoffmanni	28.47	3.00e-17	82.00
IUUC-Cgl-026664	Colletotrichum gloeosporioides	35.70	1.00e-72	266.00
IUUC-Dno-030035	Dasypus novemcinctus	24.95	3.00e-16	78.60
IUUC-Dse-031354	Dothistroma septosporum	34.41	9.00e-86	309.00
IUUC-Eca-033332	Equus caballus	25.16	6.00e-17	81.30
IUUC-Fca-035571	Felis catus	25.38	1.00e-17	83.60
IUUC-Fal-037421	Ficedula albicollis	24.36	2.00e-19	89.40
IUUC-Fox-038069	Fusarium oxysporum	37.36	6.00e-80	290.00
IUUC-Fso-038192	Fusarium solani	37.99	2.00e-84	305.00
IUUC-Gmo-039365	Gadus morhua	26.32	5.00e-17	81.30
IUUC-Gga-041153	Gallus gallus	23.45	2.00e-18	86.30
IUUC-Gma-043734	Glycine max	25.57	6.00e-19	87.00
IUUC-Hsa-045862	Homo sapiens	25.11	2.00e-17	83.20
IUUC-Hvu-047728	Hordeum vulgare	25.19	7.00e-17	80.10
IUUC-Itr-048786	Ictidomys tridecemlineatus	25.63	2.00e-17	82.80
IUUC-Lch-050616	Latimeria chalumnae	28.52	2.00e-19	89.40
IUUC-Lpe-051222	Leersia perrieri	25.77	8.00e-16	77.00
IUUC-Lma-053098	Leptosphaeria maculans	36.91	1.00e-97	349.00
IUUC-Laf-053892	Loxodonta africana	23.64	1.00e-16	80.10
IUUC-Mcc-055854	Macaca mulatta	25.11	2.00e-17	82.80
IUUC-Mor-057144	Magnaporthe oryzae	54.57	0.00e+00	715.00
IUUC-Mpo-057501	Magnaporthe poae	88.18	0.00e+00	1091.00
IUUC-Mtr-058510	Medicago truncatula	25.00	4.00e-17	80.90
IUUC-Mla-058823	Melampsora laricipopulina	23.18	9.00e-12	63.50
IUUC-Mga-060128	Meleagris gallopavo	23.49	3.00e-18	85.50
IUUC-Mvi-060475	Microbotryum violaceum	27.75	4.00e-31	128.00
IUUC-Mdo-063020	Monodelphis domestica	25.00	2.00e-19	89.40
IUUC-Mmu-063713	Mus musculus	25.23	1.00e-17	83.20
IUUC-Mac-064653	Musa acuminata	26.24	3.00e-13	68.20
IUUC-Mpu-066490	Mustela putorius furo	25.38	9.00e-18	84.00
IUUC-Mlu-067900	Myotis lucifugus	24.89	7.00e-17	80.90
IUUC-Nfi-068433	Neosartorya fischeri	38.84	8.00e-87	313.00
IUUC-Ncr-068776	Neurospora crassa	46.35	2.00e-98	352.00
IUUC-Nle-069675	Nomascus leucogenys	28.72	9.00e-17	80.50
IUUC-Ont-071441	Oreochromis niloticus	24.50	3.00e-18	85.50
IUUC-Oan-072757	Ornithorhynchus anatinus	27.57	4.00e-16	78.60
IUUC-Oba-075844	Oryza barthii	25.51	1.00e-14	73.20
IUUC-Obr-076625	Oryza brachyantha	25.87	3.00e-17	81.60
IUUC-Ogl-077771	Oryza glaberrima	25.51	1.00e-14	73.20
IUUC-Ogu-078475	Oryza glumaepatula	23.79	1.00e-10	59.30
IUUC-Oin-079958	Oryza indica	25.51	1.00e-14	72.80
IUUC-Olo-080311	Oryza longistaminata	25.77	3.00e-15	74.70
IUUC-Ome-081985	Oryza meridionalis	25.77	6.00e-15	73.90
IUUC-Oni-082921	Oryza nivara	25.51	1.00e-14	72.80
IUUC-Opu-083174	Oryza punctata	26.38	2.00e-19	89.00
IUUC-Oru-084338	Oryza rufipogon	25.51	1.00e-14	73.20
IUUC-Oga-088358	Otolemur garnettii	24.89	1.00e-17	83.60
IUUC-Oar-089994	Ovis aries	25.16	3.00e-18	85.10
IUUC-Ptr-091338	Pan troglodytes	25.11	1.00e-17	83.60
IUUC-Pan-091759	Papio anubis	24.89	3.00e-17	82.00
IUUC-Psi-093211	Pelodiscus sinensis	24.32	6.00e-18	84.30
IUUC-Pno-094964	Phaeosphaeria nodorum	38.75	1.00e-94	339.00
IUUC-Pfo-096592	Poecilia formosa	26.22	2.00e-13	69.30
IUUC-Pop-099255	Populus trichocarpa	30.40	4.00e-18	84.70
IUUC-Ppe-101333	Prunus persica	25.42	2.00e-19	89.00
IUUC-Pgr-103383	Puccinia graminis	26.44	6.00e-16	77.40
IUUC-Ptt-103974	Puccinia triticina	27.89	1.00e-15	76.60
IUUC-Pte-104329	Pyrenophora teres	37.80	3.00e-99	354.00
IUUC-Pyt-104424	Pyrenophora triticirepentis	36.89	3.00e-97	347.00
IUUC-Rno-105720	Rattus norvegicus	24.94	1.00e-17	83.60
IUUC-Sha-106891	Sarcophilus harrisii	23.76	5.00e-16	78.20
IUUC-Sja-107723	Schizosaccharomyces japonicus	27.61	8.00e-33	133.00
IUUC-Spo-108060	Schizosaccharomyces pombe	27.67	4.00e-25	107.00
IUUC-Ssl-108481	Sclerotinia sclerotiorum	37.79	3.00e-87	314.00
IUUC-Sit-109862	Setaria italica	25.56	3.00e-16	78.20
IUUC-Sly-111468	Solanum lycopersicum	25.45	6.00e-21	94.00
IUUC-Stu-112346	Solanum tuberosum	25.82	2.00e-18	85.50
IUUC-Sar-113734	Sorex araneus	36.47	3.00e-08	52.00
IUUC-Sbi-114076	Sorghum bicolor	26.01	1.00e-17	83.20
IUUC-Sre-114918	Sporisorium reilianum	27.87	5.00e-14	71.60
IUUC-Ssc-115561	Sus scrofa	25.05	7.00e-19	87.40
IUUC-Tgu-117011	Taeniopygia guttata	24.68	1.00e-18	87.00
IUUC-Tca-121265	Theobroma cacao	23.57	7.00e-18	83.60
IUUC-Tre-121997	Trichoderma reesei	40.91	3.00e-93	334.00
IUUC-Tvi-122292	Trichoderma virens	39.73	2.00e-92	332.00
IUUC-Tae-123660	Triticum aestivum	25.96	8.00e-18	83.60
IUUC-Tur-126794	Triticum urartu	25.27	7.00e-14	70.10
IUUC-Tme-127090	Tuber melanosporum	29.25	2.00e-30	125.00
IUUC-Ttr-128171	Tursiops truncatus	25.81	3.00e-19	88.60
IUUC-Uma-129525	Ustilago maydis	27.04	2.00e-12	66.20
IUUC-Vda-129871	Verticillium dahliae	38.83	6.00e-72	263.00
IUUC-Vpa-130554	Vicugna pacos	33.59	1.00e-10	60.50
IUUC-Vvi-131698	Vitis vinifera	25.84	2.00e-17	82.40
IUUC-Xma-133803	Xiphophorus maculatus	25.80	4.00e-14	71.60
IUUC-Zma-135693	Zea mays	25.00	1.00e-15	76.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence