iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100017

UUCD1 version

UUC-PoT-01540

Ensembl Protein ID

POPTR_0001s10290.1

UniProt Accession

A9PEM1; A9PEM1_POPTR

Genbank Protein ID

ABK94824.1; EEE84299.1

Protein Name

Ubiquitin conjugating-like enzyme family protein

Genbank Nucleotide ID

EF146778; CM000337

Gene Name

POPTRDRAFT_709204; POPTR_0001s10290g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s10290	POPTR_0001s10290.1	POPTR_0001s10290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.00e-56	191.7	5	139
UBD/UBC-like/UBD_UBC	4.30e-75	251.5	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQ 92
           899*********************.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           Wspal++++vllsi+sll++pnp++pl  e+a+++k++r++y++++r
   Q: 93   WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 139
           *******************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsa 91
           ri kelkdl++d+++ +sa++v +d+f+++ati+gppdspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSP 95
           899**************************************************************************************** PP
   S: 92   altlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           alt+skvlls+csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 96   ALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWT 142
           **********************************************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATAAAACT GAAATCTCTC TCTCTCTCTC TCATTTCGTT TTCCCATTGC GAAGAATCTC 60
CGGTCAAGAA TAATAACAAG GAGGATCTCC CAGGTACTCC GCGTTCTATC TCTGATCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

pop:POPTR_0001s10290g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000292	Aegilops tauschii	96.62	8.00e-84	301.00
IUUC-Aml-001563	Ailuropoda melanoleuca	77.55	5.00e-69	252.00
IUUC-Atr-002782	Amborella trichopoda	100.00	6.00e-86	308.00
IUUC-Bdi-014832	Brachypodium distachyon	96.62	9.00e-84	301.00
IUUC-Csa-023668	Chlorocebus sabaeus	77.55	5.00e-69	252.00
IUUC-Cho-024987	Choloepus hoffmanni	77.55	5.00e-69	252.00
IUUC-Dno-030067	Dasypus novemcinctus	77.55	5.00e-69	252.00
IUUC-Ete-032540	Echinops telfairi	77.55	5.00e-69	252.00
IUUC-Eca-034167	Equus caballus	77.55	5.00e-69	252.00
IUUC-Gma-044172	Glycine max	100.00	6.00e-86	308.00
IUUC-Itr-048743	Ictidomys tridecemlineatus	77.55	5.00e-69	252.00
IUUC-Mpu-065724	Mustela putorius furo	77.55	5.00e-69	252.00
IUUC-Mlu-067573	Myotis lucifugus	77.14	5.00e-66	242.00
IUUC-Oga-088915	Otolemur garnettii	77.55	5.00e-69	252.00
IUUC-Pca-100678	Procavia capensis	77.55	5.00e-69	252.00
IUUC-Pva-102770	Pteropus vampyrus	77.55	5.00e-69	252.00
IUUC-Sha-106489	Sarcophilus harrisii	77.14	3.00e-66	243.00
IUUC-Smo-109317	Selaginella moellendorffii	97.97	9.00e-85	304.00
IUUC-Tca-121110	Theobroma cacao	100.00	6.00e-86	308.00
IUUC-Tae-122799	Triticum aestivum	96.62	9.00e-84	301.00
IUUC-Tur-126518	Triticum urartu	96.62	1.00e-84	305.00
IUUC-Ttr-128363	Tursiops truncatus	77.55	5.00e-69	252.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence