iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017922

Ensembl Protein ID

Bra026947.1-P

UniProt Accession

M4EDT7; M4EDT7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026947	Bra026947.1	Bra026947.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-15	57.2	213	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v ++a+ + + ++s s Dg+++v+Dlr+
   Q: 213  HDKEVLDIAWGGvGVFASVSADGSVRVFDLRD 244
           8889******54699**************987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MVRRGKEVDY PSSRESEIEP EGGAEERRFL GFLDATMGTS SDPIQDGSDE QQKRSEIYTY 60
EAPWQIYAMN WSVRRDKKYR LAITSLLEQY PNRVEIVQLD ESNGEIRSDP NLAFEHPYPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAGGA GAGGGAAGGA GGTAGGTAGG TAATGTCATG CTCAAAACGA CAACATTTTG 60
GTTTAAACAG TTAACGTTTT GTTTGAAACG CAGCGTTTTG ACAAAAAGGT ACTGAATTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0044212--F:transcription regulatory region DNA binding
GO:0043153--P:entrainment of circadian clock by photoperiod
GO:0048573--P:photoperiodism, flowering

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002310	Ailuropoda melanoleuca	56.72	1.00e-94	338.00
IUUC-Atr-002576	Amborella trichopoda	84.55	6.00e-177	612.00
IUUC-Apl-003746	Anas platyrhynchos	56.72	1.00e-94	338.00
IUUC-Aca-005293	Anolis carolinensis	57.97	1.00e-113	402.00
IUUC-Aly-006500	Arabidopsis lyrata	97.98	0.00e+00	701.00
IUUC-Ath-006739	Arabidopsis thaliana	98.27	0.00e+00	703.00
IUUC-Ame-010643	Astyanax mexicanus	52.46	4.00e-97	347.00
IUUC-Bta-013199	Bos taurus	57.97	3.00e-113	400.00
IUUC-Bdi-014374	Brachypodium distachyon	67.78	6.00e-144	503.00
IUUC-Cel-018487	Caenorhabditis elegans	52.00	2.00e-101	362.00
IUUC-Cja-018736	Callithrix jacchus	57.97	3.00e-113	400.00
IUUC-Cfa-020446	Canis familiaris	57.97	3.00e-113	400.00
IUUC-Cpo-022424	Cavia porcellus	57.97	3.00e-113	400.00
IUUC-Cre-022609	Chlamydomonas reinhardtii	64.74	1.00e-132	465.00
IUUC-Csa-024013	Chlorocebus sabaeus	56.91	3.00e-97	349.00
IUUC-Cho-024507	Choloepus hoffmanni	56.95	6.00e-94	336.00
IUUC-Cin-025620	Ciona intestinalis	58.84	4.00e-116	410.00
IUUC-Csv-026111	Ciona savignyi	59.42	8.00e-117	412.00
IUUC-Dre-027940	Danio rerio	57.97	2.00e-113	401.00
IUUC-Dno-029520	Dasypus novemcinctus	57.97	3.00e-113	400.00
IUUC-Dor-030262	Dipodomys ordii	61.62	2.00e-32	132.00
IUUC-Dme-031639	Drosophila melanogaster	56.57	1.00e-111	395.00
IUUC-Ete-032605	Echinops telfairi	48.83	3.00e-83	301.00
IUUC-Eca-033668	Equus caballus	53.62	1.00e-98	352.00
IUUC-Fca-035942	Felis catus	57.97	3.00e-113	400.00
IUUC-Fal-037544	Ficedula albicollis	57.97	3.00e-113	400.00
IUUC-Gmo-038850	Gadus morhua	57.97	1.00e-113	402.00
IUUC-Gga-040439	Gallus gallus	57.97	3.00e-113	400.00
IUUC-Gac-041776	Gasterosteus aculeatus	57.68	4.00e-113	400.00
IUUC-Gma-043558	Glycine max	91.62	0.00e+00	655.00
IUUC-Ggo-044490	Gorilla gorilla	57.97	3.00e-113	400.00
IUUC-Hsa-046015	Homo sapiens	57.97	3.00e-113	400.00
IUUC-Hvu-047667	Hordeum vulgare	67.69	4.00e-144	503.00
IUUC-Itr-048428	Ictidomys tridecemlineatus	57.97	3.00e-113	400.00
IUUC-Lch-049754	Latimeria chalumnae	58.26	6.00e-114	403.00
IUUC-Lpe-050741	Leersia perrieri	69.43	5.00e-147	513.00
IUUC-Loc-052351	Lepisosteus oculatus	57.35	6.00e-111	393.00
IUUC-Laf-054077	Loxodonta africana	57.97	3.00e-113	400.00
IUUC-Mcc-055728	Macaca mulatta	57.97	3.00e-113	400.00
IUUC-Mtr-057654	Medicago truncatula	89.49	0.00e+00	649.00
IUUC-Mla-058866	Melampsora laricipopulina	31.62	1.00e-48	187.00
IUUC-Mga-059566	Meleagris gallopavo	56.72	1.00e-94	338.00
IUUC-Mmr-060831	Microcebus murinus	57.97	3.00e-113	400.00
IUUC-Mdo-062612	Monodelphis domestica	57.97	3.00e-113	400.00
IUUC-Mmu-063399	Mus musculus	57.97	3.00e-113	400.00
IUUC-Mac-065226	Musa acuminata	76.77	2.00e-152	531.00
IUUC-Mpu-065951	Mustela putorius furo	57.97	3.00e-113	400.00
IUUC-Mlu-067858	Myotis lucifugus	58.09	3.00e-112	397.00
IUUC-Nle-070059	Nomascus leucogenys	57.97	3.00e-113	400.00
IUUC-Opr-070572	Ochotona princeps	58.31	2.00e-113	401.00
IUUC-Ont-071420	Oreochromis niloticus	56.81	9.00e-111	392.00
IUUC-Ocu-074105	Oryctolagus cuniculus	57.97	3.00e-113	400.00
IUUC-Oba-075409	Oryza barthii	69.53	6.00e-146	510.00
IUUC-Obr-076284	Oryza brachyantha	67.72	6.00e-127	446.00
IUUC-Ogl-076984	Oryza glaberrima	69.53	4.00e-146	510.00
IUUC-Ogu-078283	Oryza glumaepatula	69.27	4.00e-146	510.00
IUUC-Olo-081042	Oryza longistaminata	75.88	1.00e-106	379.00
IUUC-Ome-081174	Oryza meridionalis	69.53	3.00e-146	510.00
IUUC-Oni-082033	Oryza nivara	69.27	4.00e-146	510.00
IUUC-Opu-084034	Oryza punctata	70.16	2.00e-147	514.00
IUUC-Oru-084908	Oryza rufipogon	69.14	9.00e-130	456.00
IUUC-Osa-085678	Oryza sativa	69.27	4.00e-146	510.00
IUUC-Ola-086324	Oryzias latipes	57.97	1.00e-113	402.00
IUUC-Olu-087620	Ostreococcus lucimarinus	73.41	5.00e-149	520.00
IUUC-Oga-088446	Otolemur garnettii	57.97	3.00e-113	400.00
IUUC-Oar-090168	Ovis aries	57.97	3.00e-113	400.00
IUUC-Ptr-090691	Pan troglodytes	58.14	3.00e-113	401.00
IUUC-Pan-092772	Papio anubis	57.97	3.00e-113	400.00
IUUC-Psi-093304	Pelodiscus sinensis	58.39	7.00e-88	316.00
IUUC-Pma-094292	Petromyzon marinus	56.25	2.00e-94	338.00
IUUC-Ppa-095734	Physcomitrella patens	78.38	9.00e-160	555.00
IUUC-Pfo-097157	Poecilia formosa	57.97	1.00e-113	402.00
IUUC-Pab-097898	Pongo abelii	56.91	5.00e-97	348.00
IUUC-Pop-099943	Populus trichocarpa	93.35	0.00e+00	669.00
IUUC-Pca-100404	Procavia capensis	58.31	2.00e-113	401.00
IUUC-Ppe-102015	Prunus persica	90.88	0.00e+00	652.00
IUUC-Pva-102938	Pteropus vampyrus	51.06	3.00e-57	214.00
IUUC-Pgr-103490	Puccinia graminis	34.26	3.00e-55	208.00
IUUC-Ptt-103946	Puccinia triticina	37.79	5.00e-54	204.00
IUUC-Rno-104961	Rattus norvegicus	57.97	3.00e-113	400.00
IUUC-Sha-107196	Sarcophilus harrisii	46.82	6.00e-91	327.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	37.01	5.00e-47	181.00
IUUC-Smo-109172	Selaginella moellendorffii	76.33	5.00e-150	523.00
IUUC-Sit-110625	Setaria italica	66.89	1.00e-104	373.00
IUUC-Sly-111410	Solanum lycopersicum	89.63	0.00e+00	650.00
IUUC-Stu-112854	Solanum tuberosum	90.49	0.00e+00	654.00
IUUC-Sbi-114474	Sorghum bicolor	66.75	8.00e-142	496.00
IUUC-Ssc-116028	Sus scrofa	57.97	3.00e-113	400.00
IUUC-Tgu-117189	Taeniopygia guttata	57.97	3.00e-113	400.00
IUUC-Tru-117581	Takifugu rubripes	57.97	1.00e-113	402.00
IUUC-Tsy-119425	Tarsius syrichta	45.03	7.00e-64	236.00
IUUC-Tni-120649	Tetraodon nigroviridis	57.68	1.00e-111	395.00
IUUC-Tca-121561	Theobroma cacao	92.49	0.00e+00	667.00
IUUC-Tae-123331	Triticum aestivum	67.78	3.00e-143	501.00
IUUC-Tur-126531	Triticum urartu	69.50	6.00e-146	510.00
IUUC-Tbe-127919	Tupaia belangeri	58.31	2.00e-113	401.00
IUUC-Ttr-129135	Tursiops truncatus	59.34	2.00e-57	215.00
IUUC-Vpa-130486	Vicugna pacos	35.55	4.00e-43	167.00
IUUC-Vvi-131265	Vitis vinifera	91.62	0.00e+00	655.00
IUUC-Xtr-132175	Xenopus tropicalis	57.97	2.00e-113	401.00
IUUC-Xma-134129	Xiphophorus maculatus	57.97	1.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence