iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099273

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

ERECTA-LIKE 4 family protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_722050; POPTR_0009s11820g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s11820	POPTR_0009s11820.1	POPTR_0009s11820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-39	132.7	246	284
UBD/Beta-Prp	2.10e-47	162.9	57	290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v++++f +d +++ +GsdDgt++++D+rtg++l+
   Q: 246  GHEGDVNAVKFfPDgNRFGTGSDDGTCRLFDVRTGHQLQ 284
           8*********99999********************9987 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee... 131
           + r l+gh+++v+++++ p+++ +v++s+D+ + vw+  t++ +h++k   + v++++fsp g++++ G+ d++  +++l++ +       
   Q: 57   CCRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPAGQSVACGGLDSVCSIFNLNSPTDKDGnlt 147
           67899***************************************************************************99998866899 PP
   S: 132  ...tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtl....tgghtdsvysls.fdsngkelvsgsldgtvklwdlq.tg 212
              +lsgh+g v++ ++ pd+   l+++s D+t+ lWd+ tg     +    ++ght +v s+s   sn++ +vsgs+d+t +lwd + ++
   Q: 148  vsrMLSGHKGYVSSCQYVPDEdTHLITSSGDQTCVLWDITTGLRTSVFggefQSGHTADVLSVSiSGSNSRMFVSGSCDSTARLWDTRvAS 238
           999******************9*****************7777777667777888*********666788******************999 PP
   S: 213  ecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           + vrt++gh+  v+ v+f+p+++r+ +gs+Dg+ r++d+r+g  l+++ +++
   Q: 239  RAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDVRTGHQLQVYYQQH 290
           99****************************************9999887766 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSVSELKERH VAATETVNSL GERLKQKRLL LLDTDIAGHA RAQGRNPVSF GPTDLVCCRI 60
LQGHTGKVYS LDWTPEKNRI VSASQDGRLI VWNALTSQKT HAIKLPCAWV MTCAFSPAGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCCTTTACC TTAACTTTAC CTCTCTCCCT CTCCCTCTGT TCCCCTGTCT CTGCTCTGCA 60
GACCTCTGCA GCAAAAAACC ATGAATTGCA GTCTCAGTCC ATTACCACCT CCACTTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

KEGG

pop:POPTR_0009s11820g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cfa-020140	Canis familiaris	48.71	3.00e-86	311.00
IUUC-Cho-024766	Choloepus hoffmanni	48.61	4.00e-85	307.00
IUUC-Cin-025309	Ciona intestinalis	47.68	4.00e-88	317.00
IUUC-Csv-026258	Ciona savignyi	47.50	2.00e-87	315.00
IUUC-Gmo-039709	Gadus morhua	51.61	2.00e-90	325.00
IUUC-Gma-044308	Glycine max	91.22	0.00e+00	697.00
IUUC-Kpa-049192	Komagataella pastoris	36.16	2.00e-52	199.00
IUUC-Mtr-058752	Medicago truncatula	91.01	0.00e+00	701.00
IUUC-Mmu-063132	Mus musculus	50.32	3.00e-88	317.00
IUUC-Mac-064871	Musa acuminata	82.59	2.00e-180	624.00
IUUC-Nle-069612	Nomascus leucogenys	48.61	4.00e-85	307.00
IUUC-Ptr-091437	Pan troglodytes	48.61	4.00e-85	307.00
IUUC-Pma-094748	Petromyzon marinus	50.37	8.00e-73	266.00
IUUC-Pfo-097028	Poecilia formosa	52.26	2.00e-90	325.00
IUUC-Pca-100940	Procavia capensis	48.92	1.00e-84	306.00
IUUC-Sly-111784	Solanum lycopersicum	89.12	0.00e+00	676.00
IUUC-Stu-112400	Solanum tuberosum	89.39	0.00e+00	679.00
IUUC-Sar-113642	Sorex araneus	50.87	2.00e-79	288.00
IUUC-Tru-117828	Takifugu rubripes	52.26	6.00e-91	327.00
IUUC-Tsy-119354	Tarsius syrichta	48.30	7.00e-85	306.00
IUUC-Tbe-127469	Tupaia belangeri	42.49	1.00e-70	259.00
IUUC-Ttr-129243	Tursiops truncatus	48.61	4.00e-85	307.00
IUUC-Vvi-131162	Vitis vinifera	93.10	0.00e+00	707.00
IUUC-Xtr-132928	Xenopus tropicalis	49.03	1.00e-86	312.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence