iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095737

UUCD1 version

UUC-PhP-00423

Ensembl Protein ID

PP1S22_259V6.1

UniProt Accession

A9RQJ4; A9RQJ4_PHYPA

Genbank Protein ID

EDQ78741.1; EDQ78868.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544911; DS544911

Gene Name

PHYPADRAFT_105021; PHYPADRAFT_177288

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S22_259V6	PP1S22_259V6.1	PP1S22_259V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-33	112.7	244	276
UBD/Beta-Prp	1.30e-52	179.6	108	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH+++v +++  ++   +++Gs D+t+++WDl+
   Q: 244  GHASWVLSVDAsPEgAAIATGSSDKTVRLWDLK 276
           8********99888777**************85 PP

UBD/Beta-Prp

   S: 16   vkfspdksllat.gsrdgtikvwdvttgkllrslsgheae................vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
           ++f p+++lla+ g+ + ++k+w++t++kl +sl   +ae                v  v +s dgk l+ +  D+t+ ++d+ +gk +htl+gh
   Q: 108  MQFDPKGELLAVaGGGSCSVKIWNTTSWKLEQSLTVPKAEngadgkaadkvglgkfVLGVAWSMDGKNLACSTMDGTVAIFDVGKGKLIHTLEGH 202
           8999999999872456778***********99998888888899*************************************************** PP
   S: 94   edsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           +  v+sl fsp ++++l ++ +d+ i+++d +++  ++  +sgh ++v +v  +p+g  +++Gs D+tvrlWdlk+   ++t t  htd+v  ++
   Q: 203  NMPVRSLVFSPaDNHVLFTACDDKHIHMYDARSRMLVS-AFSGHASWVLSVDASPEGAAIATGSSDKTVRLWDLKMRASIQTVTD-HTDQVWAVA 295
           ***********777***********************9.*********************************************8.********* PP
   S: 188  fdsng.....kelvsgsldgtvklwdl 209
           f+++g      +l+s+s+d+++ l+++
   Q: 296  FRPSGegsssGRLASVSDDKSISLYEY 322
           ***99999999**************87 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MKVNSLKNVA GAHNDGIWAA AWAPATDSRP GLLITGSVDE TVKLWRGDEL ECERTNTGHS 60
LGVVAVAAHP GGRIAASTSL DSFVRVFDID SNATVTTLEA PPSEAWLMQF DPKGELLAVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTTTCCCT CCTCTCTCCT CTGCTTGCTG CTCTCGCGCC TCCTCGCAAG CTCGGTGGTT 60
GCTCTGTCTG CCTGGTGTTC GCTAAGTCGT GTCGCAGCTG CAACGATGCA TCATCGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_105021; ppp:PHYPADRAFT_177288

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	55.14	3.00e-100	357.00
IUUC-Aml-002245	Ailuropoda melanoleuca	40.06	6.00e-54	203.00
IUUC-Atr-003142	Amborella trichopoda	61.14	2.00e-75	273.00
IUUC-Apl-003179	Anas platyrhynchos	40.06	4.00e-58	217.00
IUUC-Aca-004880	Anolis carolinensis	41.03	5.00e-62	230.00
IUUC-Aly-005956	Arabidopsis lyrata	64.81	6.00e-126	442.00
IUUC-Ath-007230	Arabidopsis thaliana	65.12	1.00e-117	415.00
IUUC-Ame-011511	Astyanax mexicanus	40.76	6.00e-58	216.00
IUUC-Bta-012936	Bos taurus	40.38	2.00e-54	205.00
IUUC-Bdi-015020	Brachypodium distachyon	62.88	9.00e-99	352.00
IUUC-Bol-016345	Brassica oleracea	66.36	7.00e-128	449.00
IUUC-Bra-017323	Brassica rapa	66.05	3.00e-127	447.00
IUUC-Cja-019961	Callithrix jacchus	40.38	2.00e-54	204.00
IUUC-Cfa-020862	Canis familiaris	40.38	3.00e-54	204.00
IUUC-Cpo-021356	Cavia porcellus	40.06	3.00e-54	204.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	43.49	2.00e-55	208.00
IUUC-Csa-024067	Chlorocebus sabaeus	40.71	1.00e-54	206.00
IUUC-Cho-024421	Choloepus hoffmanni	33.49	2.00e-20	91.70
IUUC-Cin-025261	Ciona intestinalis	37.82	1.00e-58	219.00
IUUC-Cne-026846	Cryptococcus neoformans	29.26	9.00e-25	106.00
IUUC-Dre-027706	Danio rerio	32.69	4.00e-40	157.00
IUUC-Dno-029084	Dasypus novemcinctus	40.13	4.00e-53	201.00
IUUC-Dor-030353	Dipodomys ordii	35.71	9.00e-45	172.00
IUUC-Dse-031348	Dothistroma septosporum	24.44	5.00e-21	94.40
IUUC-Dme-031836	Drosophila melanogaster	36.07	4.00e-53	201.00
IUUC-Ete-032261	Echinops telfairi	40.65	1.00e-53	202.00
IUUC-Eca-034231	Equus caballus	37.11	1.00e-45	176.00
IUUC-Eeu-034828	Erinaceus europaeus	39.87	9.00e-52	196.00
IUUC-Fca-036569	Felis catus	40.06	6.00e-54	203.00
IUUC-Fal-037469	Ficedula albicollis	40.06	1.00e-57	216.00
IUUC-Fox-038047	Fusarium oxysporum	29.26	7.00e-22	97.10
IUUC-Gmo-039579	Gadus morhua	41.35	2.00e-59	221.00
IUUC-Gga-040808	Gallus gallus	39.74	7.00e-57	213.00
IUUC-Gac-042100	Gasterosteus aculeatus	41.67	7.00e-60	223.00
IUUC-Gma-044408	Glycine max	65.12	5.00e-125	439.00
IUUC-Ggo-045227	Gorilla gorilla	40.38	2.00e-54	204.00
IUUC-Hsa-045839	Homo sapiens	40.38	2.00e-54	204.00
IUUC-Hvu-047591	Hordeum vulgare	61.35	3.00e-104	370.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	40.38	2.00e-54	205.00
IUUC-Lch-049549	Latimeria chalumnae	37.82	3.00e-52	197.00
IUUC-Lpe-050746	Leersia perrieri	61.89	2.00e-100	357.00
IUUC-Loc-052540	Lepisosteus oculatus	40.38	2.00e-54	204.00
IUUC-Laf-053907	Loxodonta africana	40.38	2.00e-54	205.00
IUUC-Mcc-055828	Macaca mulatta	37.95	6.00e-51	193.00
IUUC-Meu-056075	Macropus eugenii	39.86	8.00e-50	189.00
IUUC-Mor-056971	Magnaporthe oryzae	26.88	3.00e-18	85.10
IUUC-Mtr-057728	Medicago truncatula	64.20	4.00e-115	406.00
IUUC-Mga-059872	Meleagris gallopavo	39.74	4.00e-57	214.00
IUUC-Mvi-060564	Microbotryum violaceum	26.84	1.00e-21	96.70
IUUC-Mmr-060985	Microcebus murinus	40.06	9.00e-54	202.00
IUUC-Mdo-062758	Monodelphis domestica	40.06	4.00e-58	217.00
IUUC-Mmu-063580	Mus musculus	41.03	1.00e-54	205.00
IUUC-Mac-064880	Musa acuminata	67.38	9.00e-128	448.00
IUUC-Mpu-066577	Mustela putorius furo	40.06	2.00e-53	201.00
IUUC-Nle-069573	Nomascus leucogenys	40.38	2.00e-54	204.00
IUUC-Opr-070216	Ochotona princeps	40.06	1.00e-53	202.00
IUUC-Ont-071981	Oreochromis niloticus	41.35	2.00e-59	221.00
IUUC-Oan-073223	Ornithorhynchus anatinus	41.43	4.00e-40	156.00
IUUC-Ocu-074199	Oryctolagus cuniculus	37.00	3.00e-45	174.00
IUUC-Oba-075255	Oryza barthii	64.66	1.00e-85	308.00
IUUC-Obr-076168	Oryza brachyantha	63.26	5.00e-72	263.00
IUUC-Ogl-077777	Oryza glaberrima	62.69	4.00e-101	360.00
IUUC-Ogu-078780	Oryza glumaepatula	62.69	4.00e-101	360.00
IUUC-Oin-079228	Oryza indica	62.69	6.00e-104	369.00
IUUC-Olo-080617	Oryza longistaminata	67.36	1.00e-56	211.00
IUUC-Ome-081421	Oryza meridionalis	61.47	1.00e-100	358.00
IUUC-Oni-082997	Oryza nivara	62.69	6.00e-104	369.00
IUUC-Opu-083931	Oryza punctata	62.88	6.00e-103	366.00
IUUC-Oru-084645	Oryza rufipogon	62.69	4.00e-101	360.00
IUUC-Osa-085842	Oryza sativa	62.69	6.00e-104	369.00
IUUC-Ola-086696	Oryzias latipes	41.03	5.00e-57	213.00
IUUC-Olu-087643	Ostreococcus lucimarinus	46.26	4.00e-53	199.00
IUUC-Oga-088272	Otolemur garnettii	40.71	9.00e-55	206.00
IUUC-Oar-089416	Ovis aries	40.38	2.00e-54	205.00
IUUC-Ptr-090944	Pan troglodytes	40.38	2.00e-54	204.00
IUUC-Pan-091861	Papio anubis	40.38	2.00e-54	204.00
IUUC-Psi-093750	Pelodiscus sinensis	40.38	2.00e-56	212.00
IUUC-Pma-094608	Petromyzon marinus	39.75	2.00e-51	195.00
IUUC-Pfo-096479	Poecilia formosa	41.35	2.00e-55	208.00
IUUC-Pab-098179	Pongo abelii	40.38	2.00e-54	204.00
IUUC-Pop-099532	Populus trichocarpa	65.88	1.00e-117	415.00
IUUC-Pca-100664	Procavia capensis	33.06	2.00e-25	108.00
IUUC-Ppe-102056	Prunus persica	61.92	3.00e-119	420.00
IUUC-Pva-102859	Pteropus vampyrus	40.32	3.00e-53	201.00
IUUC-Pte-104236	Pyrenophora teres	29.55	6.00e-19	87.40
IUUC-Rno-105826	Rattus norvegicus	41.03	3.00e-54	204.00
IUUC-Sha-106660	Sarcophilus harrisii	39.42	4.00e-54	204.00
IUUC-Sja-107800	Schizosaccharomyces japonicus	28.62	1.00e-21	95.90
IUUC-Spo-108244	Schizosaccharomyces pombe	26.69	2.00e-22	99.00
IUUC-Smo-109382	Selaginella moellendorffii	65.53	1.00e-116	411.00
IUUC-Sit-110048	Setaria italica	63.50	7.00e-94	336.00
IUUC-Sly-111618	Solanum lycopersicum	59.51	1.00e-105	375.00
IUUC-Stu-112543	Solanum tuberosum	59.82	3.00e-109	387.00
IUUC-Sar-113743	Sorex araneus	39.73	7.00e-39	153.00
IUUC-Sbi-114309	Sorghum bicolor	62.58	3.00e-92	330.00
IUUC-Ssc-115560	Sus scrofa	38.14	5.00e-49	187.00
IUUC-Tgu-117300	Taeniopygia guttata	39.74	3.00e-57	214.00
IUUC-Tru-117933	Takifugu rubripes	41.35	4.00e-59	220.00
IUUC-Tsy-119574	Tarsius syrichta	34.29	5.00e-38	150.00
IUUC-Tni-120191	Tetraodon nigroviridis	40.40	1.00e-42	165.00
IUUC-Tca-120983	Theobroma cacao	65.53	2.00e-122	431.00
IUUC-Tae-122888	Triticum aestivum	62.58	5.00e-103	366.00
IUUC-Tur-126711	Triticum urartu	61.16	6.00e-100	356.00
IUUC-Tme-127066	Tuber melanosporum	27.05	5.00e-23	101.00
IUUC-Tbe-127802	Tupaia belangeri	40.06	6.00e-54	203.00
IUUC-Vda-129720	Verticillium dahliae	27.94	6.00e-17	80.90
IUUC-Vpa-130618	Vicugna pacos	40.49	6.00e-47	179.00
IUUC-Vvi-130981	Vitis vinifera	65.74	5.00e-121	426.00
IUUC-Xtr-132460	Xenopus tropicalis	40.06	7.00e-57	213.00
IUUC-Xma-134154	Xiphophorus maculatus	41.35	1.00e-55	208.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence