iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-26	90.0	109	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.......sd.tllvsGsdDgtikvWDlrtgv 34
           gH++ ++ ++         + + +v+Gs+Dgt+kvWD+r+  
   Q: 109  GHKEIINTIDGigglgigEGaPEIVTGSRDGTVKVWDPRQKE 150
           67777888875577777634678**************98866 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSTFEKPQII VHIQKGLNYT VFDCKWVPCS AKFVTMGNFA RGTGVIQVYE IQRGDLKLLR 60
EIEKAKPIKC GTFGAASLQQ RFLATGDFDG NLHIWNLEAP EIPVYSVKGH KEIINTIDGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCAGTTTGG TTACCAGGTT AGCGTTTGGC TGCTTCTGCA CCATGTCCAC CTTCGAGAAG 60
CCTCAGATCA TTGTCCATAT TCAAAAGGGC CTCAACTATA CAGTGTTCGA CTGCAAATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

rno:498418

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001641	Ailuropoda melanoleuca	94.12	0.00e+00	686.00
IUUC-Apl-003566	Anas platyrhynchos	70.79	6.00e-143	501.00
IUUC-Aca-004379	Anolis carolinensis	84.27	4.00e-180	624.00
IUUC-Ame-011892	Astyanax mexicanus	78.81	7.00e-172	596.00
IUUC-Bta-013172	Bos taurus	93.00	0.00e+00	680.00
IUUC-Cja-019636	Callithrix jacchus	92.44	0.00e+00	675.00
IUUC-Cfa-020693	Canis familiaris	94.12	0.00e+00	686.00
IUUC-Cpo-022505	Cavia porcellus	93.28	0.00e+00	666.00
IUUC-Cre-022581	Chlamydomonas reinhardtii	57.26	3.00e-122	431.00
IUUC-Csa-023448	Chlorocebus sabaeus	92.72	0.00e+00	677.00
IUUC-Cho-025072	Choloepus hoffmanni	82.41	7.00e-141	493.00
IUUC-Cin-025477	Ciona intestinalis	66.10	1.00e-136	479.00
IUUC-Csv-026095	Ciona savignyi	61.45	7.00e-114	403.00
IUUC-Dre-028504	Danio rerio	82.02	3.00e-177	614.00
IUUC-Dno-028991	Dasypus novemcinctus	93.56	0.00e+00	683.00
IUUC-Dor-030198	Dipodomys ordii	87.11	0.00e+00	629.00
IUUC-Dse-031276	Dothistroma septosporum	25.00	8.00e-06	45.80
IUUC-Dme-031855	Drosophila melanogaster	56.53	5.00e-120	424.00
IUUC-Ete-032891	Echinops telfairi	91.60	0.00e+00	649.00
IUUC-Eca-033980	Equus caballus	93.84	0.00e+00	683.00
IUUC-Eeu-035248	Erinaceus europaeus	84.87	1.00e-173	603.00
IUUC-Fca-035816	Felis catus	94.68	0.00e+00	687.00
IUUC-Fal-037423	Ficedula albicollis	82.77	1.00e-177	615.00
IUUC-Gmo-039717	Gadus morhua	79.19	8.00e-165	573.00
IUUC-Gga-040937	Gallus gallus	83.90	4.00e-175	607.00
IUUC-Gac-042520	Gasterosteus aculeatus	80.06	7.00e-173	600.00
IUUC-Ggo-045335	Gorilla gorilla	93.00	0.00e+00	680.00
IUUC-Hsa-046065	Homo sapiens	93.28	0.00e+00	661.00
IUUC-Itr-048758	Ictidomys tridecemlineatus	95.52	0.00e+00	674.00
IUUC-Lch-050048	Latimeria chalumnae	84.83	2.00e-177	615.00
IUUC-Loc-052214	Lepisosteus oculatus	82.32	1.00e-172	598.00
IUUC-Laf-054161	Loxodonta africana	92.72	0.00e+00	674.00
IUUC-Mcc-055366	Macaca mulatta	93.00	0.00e+00	679.00
IUUC-Meu-056555	Macropus eugenii	76.17	2.00e-105	374.00
IUUC-Mga-059823	Meleagris gallopavo	86.50	4.00e-138	485.00
IUUC-Mmr-061739	Microcebus murinus	94.96	0.00e+00	670.00
IUUC-Mdo-061852	Monodelphis domestica	88.52	0.00e+00	655.00
IUUC-Mmu-063204	Mus musculus	97.48	0.00e+00	705.00
IUUC-Mpu-065991	Mustela putorius furo	94.40	0.00e+00	687.00
IUUC-Mlu-067191	Myotis lucifugus	93.84	0.00e+00	681.00
IUUC-Nle-069750	Nomascus leucogenys	92.72	0.00e+00	677.00
IUUC-Opr-070193	Ochotona princeps	94.40	0.00e+00	687.00
IUUC-Ont-071758	Oreochromis niloticus	80.06	3.00e-167	582.00
IUUC-Oan-072776	Ornithorhynchus anatinus	87.50	6.00e-77	279.00
IUUC-Ocu-074633	Oryctolagus cuniculus	92.44	0.00e+00	677.00
IUUC-Ola-086652	Oryzias latipes	79.21	3.00e-173	602.00
IUUC-Olu-087833	Ostreococcus lucimarinus	48.84	5.00e-93	334.00
IUUC-Oga-088666	Otolemur garnettii	93.84	0.00e+00	665.00
IUUC-Oar-089500	Ovis aries	91.60	0.00e+00	660.00
IUUC-Ptr-090681	Pan troglodytes	93.00	0.00e+00	679.00
IUUC-Pan-092588	Papio anubis	93.00	0.00e+00	679.00
IUUC-Psi-093562	Pelodiscus sinensis	88.12	2.00e-110	391.00
IUUC-Pma-094744	Petromyzon marinus	79.92	2.00e-124	438.00
IUUC-Ppa-095392	Physcomitrella patens	54.67	2.00e-116	411.00
IUUC-Pfo-096229	Poecilia formosa	81.07	1.00e-176	613.00
IUUC-Pab-097848	Pongo abelii	93.00	0.00e+00	679.00
IUUC-Pca-100296	Procavia capensis	74.23	7.00e-146	509.00
IUUC-Pva-102495	Pteropus vampyrus	85.71	2.00e-175	607.00
IUUC-Sha-107141	Sarcophilus harrisii	89.24	0.00e+00	637.00
IUUC-Smo-108897	Selaginella moellendorffii	60.17	4.00e-122	431.00
IUUC-Sar-113523	Sorex araneus	93.58	2.00e-160	559.00
IUUC-Ssc-116433	Sus scrofa	93.56	0.00e+00	679.00
IUUC-Tgu-116611	Taeniopygia guttata	82.15	6.00e-174	603.00
IUUC-Tru-118356	Takifugu rubripes	78.49	2.00e-172	599.00
IUUC-Tsy-119597	Tarsius syrichta	94.40	0.00e+00	661.00
IUUC-Tni-120540	Tetraodon nigroviridis	78.77	7.00e-172	596.00
IUUC-Tbe-127572	Tupaia belangeri	91.10	1.00e-76	281.00
IUUC-Ttr-128590	Tursiops truncatus	92.44	0.00e+00	666.00
IUUC-Vpa-130158	Vicugna pacos	94.40	0.00e+00	686.00
IUUC-Xtr-131856	Xenopus tropicalis	81.13	6.00e-121	426.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence