iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-059366

Ensembl Protein ID

ENSMGAP00000014206.2

UniProt Accession

G1NL50; G1NL50_MELGA

Protein Name

Uncharacterized protein

Gene Name

CDC40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000013448.2	ENSMGAT00000015132.2	ENSMGAP00000014206.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-32	110.3	275	312
UBD/Beta-Prp	3.10e-47	160.9	224	433

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH   v++++f +  t+++s+++D  ik+WD+ tg ++
   Q: 275  GHGKAVRDICFnNAgTRFLSAAYDRYIKLWDTETGQCI 312
           8999*******6337********************996 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdlet.gqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++   + cl+ t+ gh ++v+ ++++  g  + s+++Dr ++lWd +tg++
   Q: 224  KQIHVWSGHTKGVSAVRLFPlSGHMLLSCSMDCKIKLWEVYGdRRCLR-TFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQC 311
           677888888888888888887778888888888888888754045555.8888888888888888888888888888888888888888 PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           + ++t  + +  y+++f+++    + +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  +     
   Q: 312  ISRFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 398
           88886..4666677777777666677888888888888888888888888888888888888888888888888888888766666666 PP
   S: 258  ktlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
           k ++ +  ++++  +ls++++ l+  s d+++ i+
   Q: 399  KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF 433
           77777777777777777777777777777776665 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

SCMSVLFQED VETGVHLDPA IKEVQYNPTY ETMFAPEFGP ENPFRTQQMA APRNMLSGYA 60
EPAHINDFMF EQQRRTFVTY GYALDPSIDN PEVATKYIGS VEEAEKNQGL TVFETGQKKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTGTATGT CTGTTTTATT TCAGGAAGAT GTGGAAACAG GAGTCCATCT TGATCCTGCT 60
ATTAAGGAAG TTCAGTACAA TCCTACTTAT GAGACCATGT TTGCACCTGA GGTAAGAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0003723--F:RNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	49.81	4.00e-144	504.00
IUUC-Aml-002243	Ailuropoda melanoleuca	93.62	0.00e+00	730.00
IUUC-Atr-002502	Amborella trichopoda	50.75	6.00e-153	533.00
IUUC-Apl-003885	Anas platyrhynchos	98.85	0.00e+00	1056.00
IUUC-Aca-004854	Anolis carolinensis	72.08	0.00e+00	744.00
IUUC-Aly-006158	Arabidopsis lyrata	50.94	9.00e-155	540.00
IUUC-Ath-007474	Arabidopsis thaliana	51.69	2.00e-155	541.00
IUUC-Ago-007726	Ashbya gossypii	36.57	8.00e-70	257.00
IUUC-Acl-008220	Aspergillus clavatus	44.96	3.00e-132	464.00
IUUC-Afl-008473	Aspergillus flavus	44.49	7.00e-129	453.00
IUUC-Afu-008773	Aspergillus fumigatus	44.74	3.00e-131	461.00
IUUC-Ani-009323	Aspergillus nidulans	43.83	3.00e-118	418.00
IUUC-Ang-009851	Aspergillus niger	45.15	2.00e-130	459.00
IUUC-Aor-009950	Aspergillus oryzae	44.49	7.00e-129	453.00
IUUC-Ate-010372	Aspergillus terreus	45.17	2.00e-133	468.00
IUUC-Ame-011660	Astyanax mexicanus	86.12	0.00e+00	954.00
IUUC-Bgr-012230	Blumeria graminis	44.44	2.00e-124	438.00
IUUC-Bta-012568	Bos taurus	94.66	0.00e+00	1004.00
IUUC-Bci-013646	Botrytis cinerea	43.96	3.00e-120	425.00
IUUC-Bdi-014199	Brachypodium distachyon	50.19	2.00e-144	505.00
IUUC-Bol-015695	Brassica oleracea	51.79	9.00e-162	563.00
IUUC-Bra-017923	Brassica rapa	52.27	6.00e-162	563.00
IUUC-Cel-018535	Caenorhabditis elegans	53.59	2.00e-175	608.00
IUUC-Cja-019071	Callithrix jacchus	94.47	0.00e+00	1003.00
IUUC-Cfa-020559	Canis familiaris	94.66	0.00e+00	1002.00
IUUC-Cpo-022356	Cavia porcellus	94.08	0.00e+00	1001.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	44.90	2.00e-79	288.00
IUUC-Csa-023125	Chlorocebus sabaeus	94.47	0.00e+00	1004.00
IUUC-Cho-024676	Choloepus hoffmanni	87.60	0.00e+00	927.00
IUUC-Cin-025229	Ciona intestinalis	70.24	0.00e+00	766.00
IUUC-Csv-025868	Ciona savignyi	73.68	1.00e-42	163.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	41.30	2.00e-108	385.00
IUUC-Cne-026885	Cryptococcus neoformans	53.08	3.00e-152	531.00
IUUC-Dre-027631	Danio rerio	86.10	0.00e+00	960.00
IUUC-Dno-029815	Dasypus novemcinctus	83.93	0.00e+00	915.00
IUUC-Dor-030978	Dipodomys ordii	89.16	0.00e+00	791.00
IUUC-Dse-031520	Dothistroma septosporum	42.76	2.00e-96	345.00
IUUC-Dme-032050	Drosophila melanogaster	65.55	0.00e+00	741.00
IUUC-Ete-032866	Echinops telfairi	92.56	0.00e+00	977.00
IUUC-Eca-033384	Equus caballus	94.47	0.00e+00	997.00
IUUC-Eeu-034471	Erinaceus europaeus	79.39	0.00e+00	765.00
IUUC-Fca-035727	Felis catus	94.66	0.00e+00	1004.00
IUUC-Fal-036774	Ficedula albicollis	97.71	0.00e+00	1058.00
IUUC-Fox-037951	Fusarium oxysporum	43.39	4.00e-124	437.00
IUUC-Fso-038287	Fusarium solani	43.38	2.00e-122	432.00
IUUC-Gmo-039670	Gadus morhua	83.49	0.00e+00	927.00
IUUC-Ggr-039764	Gaeumannomyces graminis	40.68	8.00e-115	406.00
IUUC-Gga-040293	Gallus gallus	99.81	0.00e+00	1065.00
IUUC-Gac-042159	Gasterosteus aculeatus	85.20	0.00e+00	957.00
IUUC-Gma-044299	Glycine max	63.34	9.00e-137	479.00
IUUC-Ggo-044864	Gorilla gorilla	94.27	0.00e+00	1002.00
IUUC-Hsa-046602	Homo sapiens	94.27	0.00e+00	1002.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	95.93	0.00e+00	799.00
IUUC-Kpa-049318	Komagataella pastoris	45.01	3.00e-96	345.00
IUUC-Lch-049796	Latimeria chalumnae	76.00	0.00e+00	821.00
IUUC-Lpe-051153	Leersia perrieri	51.15	2.00e-147	514.00
IUUC-Loc-052467	Lepisosteus oculatus	87.81	0.00e+00	971.00
IUUC-Lma-053107	Leptosphaeria maculans	48.40	2.00e-112	399.00
IUUC-Laf-053787	Loxodonta africana	93.92	0.00e+00	1024.00
IUUC-Mcc-055706	Macaca mulatta	94.47	0.00e+00	1004.00
IUUC-Meu-056757	Macropus eugenii	79.23	3.00e-180	624.00
IUUC-Mor-057079	Magnaporthe oryzae	39.63	4.00e-114	404.00
IUUC-Mpo-057533	Magnaporthe poae	47.32	2.00e-112	398.00
IUUC-Mtr-057950	Medicago truncatula	48.88	1.00e-149	523.00
IUUC-Mla-058910	Melampsora laricipopulina	47.20	5.00e-148	517.00
IUUC-Mvi-060349	Microbotryum violaceum	57.68	1.00e-134	473.00
IUUC-Mmr-061209	Microcebus murinus	94.66	0.00e+00	1032.00
IUUC-Mdo-062118	Monodelphis domestica	95.19	0.00e+00	1034.00
IUUC-Mmu-063173	Mus musculus	94.08	0.00e+00	1001.00
IUUC-Mac-065080	Musa acuminata	51.66	8.00e-153	533.00
IUUC-Mpu-066659	Mustela putorius furo	94.66	0.00e+00	1004.00
IUUC-Mlu-067029	Myotis lucifugus	95.55	0.00e+00	998.00
IUUC-Nfi-068334	Neosartorya fischeri	45.23	5.00e-133	467.00
IUUC-Ncr-068675	Neurospora crassa	39.02	7.00e-103	367.00
IUUC-Nle-070113	Nomascus leucogenys	94.47	0.00e+00	1005.00
IUUC-Opr-070685	Ochotona princeps	85.50	0.00e+00	941.00
IUUC-Ont-071680	Oreochromis niloticus	86.10	0.00e+00	959.00
IUUC-Oan-073573	Ornithorhynchus anatinus	95.42	0.00e+00	948.00
IUUC-Ocu-074074	Oryctolagus cuniculus	94.27	0.00e+00	1033.00
IUUC-Oba-075625	Oryza barthii	51.24	8.00e-147	513.00
IUUC-Obr-076510	Oryza brachyantha	50.57	7.00e-147	513.00
IUUC-Ogl-077275	Oryza glaberrima	51.24	8.00e-147	513.00
IUUC-Ogu-078563	Oryza glumaepatula	51.24	8.00e-147	513.00
IUUC-Oin-079898	Oryza indica	63.16	4.00e-134	470.00
IUUC-Olo-081080	Oryza longistaminata	51.61	3.00e-141	494.00
IUUC-Oni-083121	Oryza nivara	51.24	8.00e-147	513.00
IUUC-Opu-083329	Oryza punctata	50.57	2.00e-146	512.00
IUUC-Oru-084807	Oryza rufipogon	50.73	3.00e-128	451.00
IUUC-Osa-086039	Oryza sativa	51.33	2.00e-147	515.00
IUUC-Ola-087149	Oryzias latipes	85.90	0.00e+00	951.00
IUUC-Olu-087627	Ostreococcus lucimarinus	43.35	4.00e-122	431.00
IUUC-Oga-088359	Otolemur garnettii	94.47	0.00e+00	1001.00
IUUC-Oar-089390	Ovis aries	94.66	0.00e+00	1002.00
IUUC-Ptr-090894	Pan troglodytes	94.27	0.00e+00	1002.00
IUUC-Pan-092476	Papio anubis	94.47	0.00e+00	1004.00
IUUC-Psi-093527	Pelodiscus sinensis	95.45	0.00e+00	961.00
IUUC-Pno-094771	Phaeosphaeria nodorum	47.83	9.00e-112	396.00
IUUC-Ppa-095386	Physcomitrella patens	50.09	4.00e-154	537.00
IUUC-Pfo-096139	Poecilia formosa	87.05	0.00e+00	966.00
IUUC-Pab-097838	Pongo abelii	94.41	0.00e+00	884.00
IUUC-Pop-098945	Populus trichocarpa	51.13	1.00e-152	532.00
IUUC-Pca-100876	Procavia capensis	78.44	0.00e+00	845.00
IUUC-Ppe-101777	Prunus persica	50.85	1.00e-150	526.00
IUUC-Pva-102418	Pteropus vampyrus	94.66	0.00e+00	1004.00
IUUC-Pgr-103456	Puccinia graminis	50.92	8.00e-159	553.00
IUUC-Ptt-103731	Puccinia triticina	47.75	7.00e-145	507.00
IUUC-Pte-104386	Pyrenophora teres	50.12	1.00e-113	402.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.87	2.00e-113	402.00
IUUC-Rno-105694	Rattus norvegicus	89.31	0.00e+00	928.00
IUUC-Sce-106339	Saccharomyces cerevisiae	38.83	5.00e-76	278.00
IUUC-Sha-106709	Sarcophilus harrisii	95.38	0.00e+00	1033.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	40.31	4.00e-124	437.00
IUUC-Spo-108331	Schizosaccharomyces pombe	42.88	4.00e-122	431.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	45.28	2.00e-114	405.00
IUUC-Smo-108778	Selaginella moellendorffii	44.38	7.00e-126	443.00
IUUC-Sit-110446	Setaria italica	50.29	2.00e-146	511.00
IUUC-Sly-111330	Solanum lycopersicum	50.37	1.00e-150	526.00
IUUC-Stu-112610	Solanum tuberosum	50.28	3.00e-150	524.00
IUUC-Sar-113065	Sorex araneus	74.33	8.00e-121	426.00
IUUC-Sbi-114005	Sorghum bicolor	50.48	3.00e-146	511.00
IUUC-Sre-114988	Sporisorium reilianum	49.44	4.00e-156	544.00
IUUC-Ssc-115760	Sus scrofa	94.66	0.00e+00	1004.00
IUUC-Tgu-116493	Taeniopygia guttata	97.49	0.00e+00	1053.00
IUUC-Tru-118489	Takifugu rubripes	83.69	0.00e+00	936.00
IUUC-Tsy-119332	Tarsius syrichta	94.81	0.00e+00	1031.00
IUUC-Tni-120202	Tetraodon nigroviridis	79.85	0.00e+00	863.00
IUUC-Tca-121429	Theobroma cacao	49.35	8.00e-150	523.00
IUUC-Tre-122162	Trichoderma reesei	43.85	3.00e-123	435.00
IUUC-Tvi-122500	Trichoderma virens	43.24	4.00e-122	431.00
IUUC-Tae-125557	Triticum aestivum	49.52	2.00e-143	502.00
IUUC-Tur-126554	Triticum urartu	49.52	2.00e-141	495.00
IUUC-Tme-126919	Tuber melanosporum	46.42	8.00e-137	480.00
IUUC-Tbe-127968	Tupaia belangeri	88.93	0.00e+00	959.00
IUUC-Ttr-129215	Tursiops truncatus	94.27	0.00e+00	996.00
IUUC-Uma-129622	Ustilago maydis	49.28	1.00e-158	553.00
IUUC-Vda-129750	Verticillium dahliae	44.23	3.00e-123	434.00
IUUC-Vpa-130617	Vicugna pacos	92.44	0.00e+00	950.00
IUUC-Vvi-131238	Vitis vinifera	61.52	5.00e-134	471.00
IUUC-Xtr-131865	Xenopus tropicalis	90.51	0.00e+00	991.00
IUUC-Xma-133627	Xiphophorus maculatus	87.24	0.00e+00	968.00
IUUC-Yli-134390	Yarrowia lipolytica	45.34	3.00e-115	408.00
IUUC-Zma-135925	Zea mays	50.86	4.00e-142	497.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence