iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-134112

Ensembl Protein ID

ENSXMAP00000013729.1

UniProt Accession

M4AGY5; M4AGY5_XIPMA

Genbank Protein ID

ENSXMAP00000013729

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01010751

Gene Name

UBR1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000013626.1	ENSXMAT00000013745.1	ENSXMAP00000013729.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/N-recognin/N-domain	2.70e-31	107.6	222	297
E3 activity/RING/RING	3.00e-07	30.9	1090	1196
E3 activity/N-recognin/UBR-box	5.90e-28	97.3	94	163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/N-recognin/N-domain

   S: 1    YylvLfNDEkHsyeqviyslqkAleleqkeakkfatiidkeGRravkaGdyavceeakkeilknseklaqipLkVe 76
           Yy+vL+NDE+Hsy++viy+lq+ ++++q+ea+ ++t idkeGRravk G+   c++ak+ i +nse+++  pL+Ve
   Q: 222  YYCVLYNDEHHSYDHVIYTLQRSVNCDQAEAQTHTTLIDKEGRRAVKRGTLRSCQQAKDLIRSNSEHISLQPLRVE 297
           9**************************************************************************8 PP

E3 activity/RING/RING

   S: 1    CaiCledf...............kd................................gplvlpCgHvfhadClqkw........... 29
           C++C+e+                ++                                g+++++CgHv+ha+C+qk+           
   Q: 1090 CILCQEEQevlplapamvltacvQRstvltqcrgripanradgtgtyplfmppdlavGTHTGSCGHVMHATCWQKYfeavqnttrnr 1176
           7888776644444444444433311444444445555555555555555555555556999***************99999999999 PP
   S: 30   ...pglknssskefrCPlCr 46
               +  +++++e +CPlC+
   Q: 1177 lhaELIVDLENGEYLCPLCK 1196
           999777777899999****6 PP

E3 activity/N-recognin/UBR-box

   S: 1    slCgrvfkvgetiyeCrtCsvdetlvlCteCfakvvHkdHeyklkksggggfCdCGdteAwedgskCkkl 70
           +lCgrvfk get+y+Cr+C++d+t+vlC++Cf+++vHk+H+yk++ s+gggfCdCGd eAw+ g+ C k+
   Q: 94   QLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDSVHKNHRYKMHASSGGGFCDCGDVEAWKVGPCCSKH 163
           68***************************************************************99987 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

MLLKQHLNMA DGEKPSEGLQ LSQEWLEAAD CRAELLQHLK DQVPQIFCLK KELSPPEEED 60
LTQRRLLHPL ECFLFGEDPQ EGRQKLQQGS ASSQLCGRVF KEGETVYSCR DCAIDPTCVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCTGTTAA AACAATCTGA AAACAAACTT TTCAGCCTTT CTTGTTAGCT GGTGAGCTAG 60
CAATTAGCAT TCAGAACAAA CAACACCACC ACAGCTCAGC TAGCAGCGGC AGCTACCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003769--ClpS_core
IPR014719--Ribosomal_L7/12_C/ClpS-like
IPR011991--WHTH_DNA-bd_dom
IPR013083--Znf_RING/FYVE/PHD
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF02617--ClpS
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0030163--P:protein catabolic process

KEGG

xma:102221910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001354	Ailuropoda melanoleuca	56.74	0.00e+00	1946.00
IUUC-Apl-004160	Anas platyrhynchos	59.11	0.00e+00	2041.00
IUUC-Aca-004982	Anolis carolinensis	56.72	0.00e+00	1963.00
IUUC-Ago-007752	Ashbya gossypii	26.60	2.00e-25	112.00
IUUC-Acl-008055	Aspergillus clavatus	26.74	3.00e-38	155.00
IUUC-Afl-008479	Aspergillus flavus	25.00	4.00e-47	184.00
IUUC-Afu-008929	Aspergillus fumigatus	25.20	2.00e-58	222.00
IUUC-Ang-009550	Aspergillus niger	24.74	1.00e-49	192.00
IUUC-Aor-010124	Aspergillus oryzae	25.00	1.00e-46	183.00
IUUC-Ate-010550	Aspergillus terreus	24.37	2.00e-52	202.00
IUUC-Ame-011231	Astyanax mexicanus	73.04	0.00e+00	2488.00
IUUC-Bta-012347	Bos taurus	57.60	0.00e+00	1960.00
IUUC-Cel-018476	Caenorhabditis elegans	31.96	1.00e-84	308.00
IUUC-Cja-018911	Callithrix jacchus	55.39	0.00e+00	1917.00
IUUC-Cfa-020991	Canis familiaris	57.52	0.00e+00	1976.00
IUUC-Cpo-021448	Cavia porcellus	57.36	0.00e+00	1972.00
IUUC-Csa-024255	Chlorocebus sabaeus	57.41	0.00e+00	1638.00
IUUC-Cho-024550	Choloepus hoffmanni	45.09	0.00e+00	1391.00
IUUC-Cin-025148	Ciona intestinalis	35.61	1.00e-135	477.00
IUUC-Csv-026296	Ciona savignyi	28.62	4.00e-16	79.00
IUUC-Dno-029427	Dasypus novemcinctus	56.53	0.00e+00	1898.00
IUUC-Dor-031073	Dipodomys ordii	53.60	0.00e+00	847.00
IUUC-Dme-031910	Drosophila melanogaster	30.82	0.00e+00	732.00
IUUC-Eca-033348	Equus caballus	57.18	0.00e+00	1858.00
IUUC-Eeu-034664	Erinaceus europaeus	53.49	0.00e+00	1174.00
IUUC-Fca-035604	Felis catus	55.25	0.00e+00	940.00
IUUC-Fal-037333	Ficedula albicollis	59.34	0.00e+00	2021.00
IUUC-Gmo-039363	Gadus morhua	72.00	0.00e+00	2215.00
IUUC-Gga-040486	Gallus gallus	58.74	0.00e+00	1966.00
IUUC-Gac-041985	Gasterosteus aculeatus	81.43	0.00e+00	2575.00
IUUC-Ggo-044704	Gorilla gorilla	53.49	0.00e+00	1514.00
IUUC-Hsa-046753	Homo sapiens	57.27	0.00e+00	1993.00
IUUC-Itr-048410	Ictidomys tridecemlineatus	56.78	0.00e+00	1968.00
IUUC-Kpa-049088	Komagataella pastoris	21.78	5.00e-39	157.00
IUUC-Lch-049904	Latimeria chalumnae	59.06	0.00e+00	1965.00
IUUC-Loc-052624	Lepisosteus oculatus	71.88	0.00e+00	2425.00
IUUC-Lma-053059	Leptosphaeria maculans	24.28	2.00e-49	192.00
IUUC-Laf-053857	Loxodonta africana	56.21	0.00e+00	1941.00
IUUC-Mcc-054873	Macaca mulatta	57.21	0.00e+00	1960.00
IUUC-Meu-056858	Macropus eugenii	47.93	0.00e+00	727.00
IUUC-Mor-057051	Magnaporthe oryzae	22.67	5.00e-44	174.00
IUUC-Mga-059917	Meleagris gallopavo	59.01	0.00e+00	2052.00
IUUC-Mmr-061128	Microcebus murinus	54.58	0.00e+00	1826.00
IUUC-Mdo-062306	Monodelphis domestica	57.98	0.00e+00	1965.00
IUUC-Mmu-063389	Mus musculus	58.00	0.00e+00	2013.00
IUUC-Mpu-065983	Mustela putorius furo	57.20	0.00e+00	1981.00
IUUC-Mlu-068013	Myotis lucifugus	56.14	0.00e+00	1907.00
IUUC-Nfi-068403	Neosartorya fischeri	25.51	2.00e-58	222.00
IUUC-Nle-070031	Nomascus leucogenys	57.36	0.00e+00	1993.00
IUUC-Opr-070551	Ochotona princeps	42.03	0.00e+00	740.00
IUUC-Ont-072035	Oreochromis niloticus	84.04	0.00e+00	2964.00
IUUC-Ocu-074930	Oryctolagus cuniculus	54.25	0.00e+00	1887.00
IUUC-Oba-075295	Oryza barthii	46.25	3.00e-14	75.50
IUUC-Ogl-077571	Oryza glaberrima	43.88	2.00e-21	99.80
IUUC-Ogu-078497	Oryza glumaepatula	46.25	3.00e-14	75.50
IUUC-Oin-079343	Oryza indica	46.25	3.00e-14	75.10
IUUC-Oni-083099	Oryza nivara	46.25	3.00e-14	75.10
IUUC-Oru-084471	Oryza rufipogon	46.25	3.00e-14	75.10
IUUC-Osa-086106	Oryza sativa	37.37	2.00e-10	61.60
IUUC-Ola-086683	Oryzias latipes	82.56	0.00e+00	2846.00
IUUC-Oga-088017	Otolemur garnettii	54.81	0.00e+00	1886.00
IUUC-Oar-089557	Ovis aries	57.36	0.00e+00	1952.00
IUUC-Ptr-091366	Pan troglodytes	56.58	0.00e+00	1965.00
IUUC-Pan-092184	Papio anubis	57.21	0.00e+00	1961.00
IUUC-Psi-093720	Pelodiscus sinensis	58.47	0.00e+00	1964.00
IUUC-Ppa-095780	Physcomitrella patens	22.29	1.00e-29	125.00
IUUC-Pfo-097124	Poecilia formosa	98.00	0.00e+00	3366.00
IUUC-Pab-098586	Pongo abelii	57.21	0.00e+00	1990.00
IUUC-Pop-099184	Populus trichocarpa	42.55	6.00e-12	65.10
IUUC-Pca-100673	Procavia capensis	51.38	0.00e+00	1013.00
IUUC-Pva-102724	Pteropus vampyrus	54.66	0.00e+00	1458.00
IUUC-Pte-104174	Pyrenophora teres	23.38	4.00e-47	184.00
IUUC-Pyt-104431	Pyrenophora triticirepentis	23.92	1.00e-47	186.00
IUUC-Sce-106272	Saccharomyces cerevisiae	19.91	2.00e-20	96.30
IUUC-Sha-106993	Sarcophilus harrisii	57.07	0.00e+00	1975.00
IUUC-Sja-107980	Schizosaccharomyces japonicus	24.51	6.00e-52	200.00
IUUC-Spo-108183	Schizosaccharomyces pombe	24.32	1.00e-50	196.00
IUUC-Sar-113447	Sorex araneus	56.07	0.00e+00	1339.00
IUUC-Sre-115045	Sporisorium reilianum	25.23	8.00e-49	190.00
IUUC-Ssc-115768	Sus scrofa	54.75	0.00e+00	1766.00
IUUC-Tgu-116949	Taeniopygia guttata	56.56	0.00e+00	1907.00
IUUC-Tru-117782	Takifugu rubripes	78.40	0.00e+00	2769.00
IUUC-Tsy-119177	Tarsius syrichta	50.72	0.00e+00	1309.00
IUUC-Tni-120884	Tetraodon nigroviridis	72.70	0.00e+00	2512.00
IUUC-Tae-125358	Triticum aestivum	44.36	4.00e-20	95.10
IUUC-Tme-127156	Tuber melanosporum	24.21	9.00e-55	210.00
IUUC-Tbe-128088	Tupaia belangeri	51.22	0.00e+00	739.00
IUUC-Ttr-129062	Tursiops truncatus	54.11	0.00e+00	1822.00
IUUC-Vpa-130578	Vicugna pacos	52.07	0.00e+00	1734.00
IUUC-Xtr-132244	Xenopus tropicalis	52.21	0.00e+00	1739.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence