iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043534

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000842

Gene Name

LOC100792624; GLYMA_09G269300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA09G40560	GLYMA09G40560.1	GLYMA09G40560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-16	59.8	85	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH d vt+++f  d + l++++ Dg+++v+ l++
   Q: 85   GHGDAVTGVCFsRDgRNLATACADGVVRVFKLDD 118
           8***********77788*************9977 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDPALPIVAL SLLLGAIIAF LIFNTYFCKR QSEIRSIADP NPNSNSNPKL VSSKPPPKKP 60
LSKPHSSDKD QNKRHHPLDL NTLKGHGDAV TGVCFSRDGR NLATACADGV VRVFKLDDAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGTGCAAA TGTGATACAG TTCATTAAGA ATCCACGTGT GCAAGTGCAA CAGCAGAGCA 60
GTTCCCAAAC CTTAACAAAA ACCAAACCCT TCTTCGTCTT CAGTTCTGTG CCTTCACTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

gmx:100792624

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	65.22	9.00e-75	272.00
IUUC-Apl-003635	Anas platyrhynchos	28.99	3.00e-34	139.00
IUUC-Bdi-014298	Brachypodium distachyon	68.80	7.00e-148	516.00
IUUC-Cel-018602	Caenorhabditis elegans	26.56	3.00e-25	109.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	41.57	4.00e-38	150.00
IUUC-Cho-024598	Choloepus hoffmanni	31.03	4.00e-25	108.00
IUUC-Fal-036992	Ficedula albicollis	29.28	5.00e-32	132.00
IUUC-Gga-040885	Gallus gallus	32.73	3.00e-26	111.00
IUUC-Mtr-058500	Medicago truncatula	84.49	0.00e+00	699.00
IUUC-Mga-059278	Meleagris gallopavo	33.94	7.00e-27	114.00
IUUC-Mac-065359	Musa acuminata	65.89	3.00e-168	584.00
IUUC-Oba-075468	Oryza barthii	70.30	2.00e-145	508.00
IUUC-Obr-076681	Oryza brachyantha	70.47	2.00e-142	498.00
IUUC-Ogl-077870	Oryza glaberrima	70.30	2.00e-145	508.00
IUUC-Ogu-078536	Oryza glumaepatula	70.30	2.00e-145	508.00
IUUC-Oin-080175	Oryza indica	70.30	2.00e-145	508.00
IUUC-Olo-080796	Oryza longistaminata	70.22	2.00e-144	505.00
IUUC-Oni-082076	Oryza nivara	70.30	2.00e-145	508.00
IUUC-Opu-083267	Oryza punctata	68.21	8.00e-148	516.00
IUUC-Oru-084553	Oryza rufipogon	70.30	2.00e-145	508.00
IUUC-Osa-085389	Oryza sativa	70.30	2.00e-145	508.00
IUUC-Sha-107265	Sarcophilus harrisii	29.82	1.00e-35	144.00
IUUC-Smo-108866	Selaginella moellendorffii	58.22	1.00e-122	432.00
IUUC-Stu-112493	Solanum tuberosum	79.12	4.00e-133	467.00
IUUC-Sbi-114397	Sorghum bicolor	69.66	3.00e-150	525.00
IUUC-Tae-124791	Triticum aestivum	67.69	9.00e-146	509.00
IUUC-Tur-126756	Triticum urartu	59.26	3.00e-127	448.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence