iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116418

Ensembl Protein ID

ENSSSCP00000008233.2

UniProt Accession

F1RJN4; F1RJN4_PIG

Genbank Protein ID

ENSSSCP00000008233

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP312931

Gene Name

TBL2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000007709.2	ENSSSCT00000008452.2	ENSSSCP00000008233.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-19	67.8	86	119

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H++ ++c++f s+ ++l++++dD ti++W+++++
   Q: 86   HNGNISCMDFsSNgKYLATCADDRTIRIWSTKDF 119
           99*********777***************98775 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MELPQMPELM GLSLLLGLLA LMATAAVARG WLRAEEETGR PVGQKANGLP PDKSLKSKKQ 60
KQRIRKEKPQ QHNFTHRLLA AALKSHNGNI SCMDFSSNGK YLATCADDRT IRIWSTKDFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCTTCAGCG ATCCCGCCCC GCCCCTCAGG ACGCGCCAAC GGCCAGGCTC CGCCCCGCGT 60
GCGCGCGCGG CCCCGCGGAA ACGTGCAGGC GCCCGGGAAG CCAGAGGCTG AGGTGGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005783--C:endoplasmic reticulum
GO:0003723--F:RNA binding
GO:0042149--P:cellular response to glucose starvation
GO:0071456--P:cellular response to hypoxia
GO:0030968--P:endoplasmic reticulum unfolded protein response

KEGG

ssc:100626099

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	31.82	3.00e-21	94.70
IUUC-Aml-002212	Ailuropoda melanoleuca	90.11	0.00e+00	708.00
IUUC-Atr-002903	Amborella trichopoda	30.84	8.00e-36	144.00
IUUC-Apl-003635	Anas platyrhynchos	74.66	8.00e-165	572.00
IUUC-Aca-004472	Anolis carolinensis	73.81	3.00e-161	560.00
IUUC-Aly-005761	Arabidopsis lyrata	30.58	1.00e-36	147.00
IUUC-Ath-007476	Arabidopsis thaliana	31.50	2.00e-37	149.00
IUUC-Ame-011221	Astyanax mexicanus	68.77	8.00e-147	513.00
IUUC-Bta-013186	Bos taurus	92.83	0.00e+00	740.00
IUUC-Bdi-014298	Brachypodium distachyon	29.77	4.00e-37	148.00
IUUC-Bol-015192	Brassica oleracea	29.75	6.00e-37	147.00
IUUC-Bra-017078	Brassica rapa	30.30	7.00e-38	150.00
IUUC-Cel-018602	Caenorhabditis elegans	30.95	3.00e-57	215.00
IUUC-Cja-018909	Callithrix jacchus	88.12	0.00e+00	702.00
IUUC-Cfa-020970	Canis familiaris	93.72	0.00e+00	752.00
IUUC-Cpo-022215	Cavia porcellus	87.74	0.00e+00	679.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	41.77	2.00e-17	81.60
IUUC-Csa-023530	Chlorocebus sabaeus	88.34	0.00e+00	721.00
IUUC-Cho-024598	Choloepus hoffmanni	92.74	3.00e-134	471.00
IUUC-Cin-025486	Ciona intestinalis	48.70	1.00e-101	363.00
IUUC-Csv-025930	Ciona savignyi	47.15	1.00e-94	340.00
IUUC-Dre-027507	Danio rerio	65.95	3.00e-145	508.00
IUUC-Dno-029726	Dasypus novemcinctus	89.23	0.00e+00	702.00
IUUC-Dor-030501	Dipodomys ordii	79.95	2.00e-176	611.00
IUUC-Ete-032794	Echinops telfairi	91.61	2.00e-131	461.00
IUUC-Eca-033982	Equus caballus	91.70	0.00e+00	716.00
IUUC-Eeu-035090	Erinaceus europaeus	90.33	3.00e-132	464.00
IUUC-Fca-035944	Felis catus	92.67	0.00e+00	744.00
IUUC-Fal-036992	Ficedula albicollis	66.93	1.00e-144	505.00
IUUC-Gmo-038710	Gadus morhua	64.55	7.00e-145	506.00
IUUC-Gga-040885	Gallus gallus	70.11	7.00e-113	399.00
IUUC-Gac-041922	Gasterosteus aculeatus	64.84	2.00e-148	518.00
IUUC-Gma-044233	Glycine max	30.00	1.00e-36	146.00
IUUC-Ggo-045172	Gorilla gorilla	89.38	0.00e+00	695.00
IUUC-Hsa-045711	Homo sapiens	89.26	0.00e+00	721.00
IUUC-Itr-048196	Ictidomys tridecemlineatus	91.67	0.00e+00	726.00
IUUC-Lch-049739	Latimeria chalumnae	70.97	4.00e-160	557.00
IUUC-Lpe-050795	Leersia perrieri	25.43	1.00e-21	97.10
IUUC-Loc-052113	Lepisosteus oculatus	73.28	1.00e-154	538.00
IUUC-Laf-053751	Loxodonta africana	89.69	0.00e+00	733.00
IUUC-Mcc-055022	Macaca mulatta	89.07	0.00e+00	716.00
IUUC-Meu-056003	Macropus eugenii	73.44	2.00e-158	551.00
IUUC-Mtr-058500	Medicago truncatula	29.56	5.00e-35	141.00
IUUC-Mga-059278	Meleagris gallopavo	69.30	2.00e-124	437.00
IUUC-Mmr-061148	Microcebus murinus	89.01	0.00e+00	717.00
IUUC-Mdo-063002	Monodelphis domestica	72.43	4.00e-155	540.00
IUUC-Mmu-063607	Mus musculus	88.49	0.00e+00	705.00
IUUC-Mac-065359	Musa acuminata	28.80	4.00e-35	142.00
IUUC-Mpu-066323	Mustela putorius furo	90.31	7.00e-171	592.00
IUUC-Mlu-067946	Myotis lucifugus	92.38	0.00e+00	753.00
IUUC-Nle-069019	Nomascus leucogenys	88.81	0.00e+00	713.00
IUUC-Opr-071047	Ochotona princeps	88.57	0.00e+00	702.00
IUUC-Ont-071694	Oreochromis niloticus	68.55	3.00e-152	531.00
IUUC-Oan-073474	Ornithorhynchus anatinus	55.46	3.00e-96	344.00
IUUC-Ocu-074493	Oryctolagus cuniculus	87.89	0.00e+00	692.00
IUUC-Oba-075468	Oryza barthii	27.22	4.00e-31	128.00
IUUC-Obr-076681	Oryza brachyantha	27.20	2.00e-33	136.00
IUUC-Ogl-077870	Oryza glaberrima	27.22	4.00e-31	128.00
IUUC-Ogu-078536	Oryza glumaepatula	27.22	4.00e-31	129.00
IUUC-Oin-080175	Oryza indica	27.22	4.00e-31	128.00
IUUC-Olo-080796	Oryza longistaminata	27.38	6.00e-31	128.00
IUUC-Oni-082076	Oryza nivara	27.22	4.00e-31	128.00
IUUC-Opu-083267	Oryza punctata	27.22	3.00e-31	129.00
IUUC-Oru-084553	Oryza rufipogon	27.22	4.00e-31	128.00
IUUC-Osa-085389	Oryza sativa	27.22	4.00e-31	128.00
IUUC-Ola-086414	Oryzias latipes	66.93	7.00e-151	526.00
IUUC-Oga-088656	Otolemur garnettii	88.79	0.00e+00	718.00
IUUC-Oar-089719	Ovis aries	92.82	0.00e+00	698.00
IUUC-Ptr-091087	Pan troglodytes	89.04	0.00e+00	718.00
IUUC-Pan-091709	Papio anubis	89.46	0.00e+00	731.00
IUUC-Psi-093265	Pelodiscus sinensis	71.65	4.00e-159	553.00
IUUC-Pma-094482	Petromyzon marinus	56.82	4.00e-55	206.00
IUUC-Ppa-095365	Physcomitrella patens	31.27	9.00e-38	150.00
IUUC-Pfo-097494	Poecilia formosa	67.79	4.00e-149	520.00
IUUC-Pab-098362	Pongo abelii	89.04	0.00e+00	719.00
IUUC-Pop-099163	Populus trichocarpa	30.33	2.00e-32	133.00
IUUC-Pca-101019	Procavia capensis	89.56	6.00e-150	523.00
IUUC-Ppe-102101	Prunus persica	31.68	1.00e-38	153.00
IUUC-Pva-102849	Pteropus vampyrus	91.67	0.00e+00	716.00
IUUC-Rno-105511	Rattus norvegicus	88.94	0.00e+00	699.00
IUUC-Sha-107265	Sarcophilus harrisii	69.32	2.00e-161	561.00
IUUC-Smo-108866	Selaginella moellendorffii	33.13	4.00e-35	141.00
IUUC-Sit-110806	Setaria italica	27.46	3.00e-33	135.00
IUUC-Sly-110994	Solanum lycopersicum	30.06	6.00e-35	141.00
IUUC-Stu-112493	Solanum tuberosum	36.98	5.00e-31	127.00
IUUC-Sar-113628	Sorex araneus	88.57	0.00e+00	721.00
IUUC-Sbi-114397	Sorghum bicolor	28.84	2.00e-34	139.00
IUUC-Tgu-117054	Taeniopygia guttata	68.62	3.00e-151	527.00
IUUC-Tru-118504	Takifugu rubripes	69.84	3.00e-157	547.00
IUUC-Tni-120254	Tetraodon nigroviridis	69.58	2.00e-155	541.00
IUUC-Tca-121085	Theobroma cacao	31.58	3.00e-37	149.00
IUUC-Tae-124320	Triticum aestivum	28.82	2.00e-36	146.00
IUUC-Tur-126756	Triticum urartu	26.63	3.00e-31	129.00
IUUC-Tbe-127903	Tupaia belangeri	88.09	0.00e+00	702.00
IUUC-Ttr-129118	Tursiops truncatus	91.63	0.00e+00	735.00
IUUC-Vvi-131125	Vitis vinifera	29.82	5.00e-36	145.00
IUUC-Xtr-132287	Xenopus tropicalis	72.75	6.00e-158	550.00
IUUC-Xma-134246	Xiphophorus maculatus	67.81	4.00e-148	517.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence